Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
LDLRP01130 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.75□□□□□ -1.97
LDLRP01130 MTND5P16-201ENST00000460269 1703 ntBASIC2.74□□□□□ -1.97
LDLRP01130 MIR412-201ENST00000362142 91 ntBASIC2.74□□□□□ -1.97
LDLRP01130 Y_RNA.187-201ENST00000363918 113 ntBASIC2.74□□□□□ -1.97
LDLRP01130 RNU6-1180P-201ENST00000364935 107 ntBASIC2.74□□□□□ -1.97
LDLRP01130 RNU1-109P-201ENST00000383960 147 ntBASIC2.74□□□□□ -1.97
LDLRP01130 Y_RNA.445-201ENST00000384168 102 ntBASIC2.74□□□□□ -1.97
LDLRP01130 RNU6-574P-201ENST00000384265 107 ntBASIC2.74□□□□□ -1.97
LDLRP01130 Y_RNA.623-201ENST00000411128 95 ntBASIC2.74□□□□□ -1.97
LDLRP01130 RNA5SP508-201ENST00000411327 119 ntBASIC2.74□□□□□ -1.97
LDLRP01130 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.74□□□□□ -1.97
LDLRP01130 AL592148.1-201ENST00000413568 445 ntBASIC2.74□□□□□ -1.97
LDLRP01130 PGBD4P6-201ENST00000421501 610 ntBASIC2.74□□□□□ -1.97
LDLRP01130 BPY2DP-201ENST00000422208 265 ntBASIC2.74□□□□□ -1.97
LDLRP01130 AL358176.2-201ENST00000425769 204 ntBASIC2.74□□□□□ -1.97
LDLRP01130 EEF1B2P7-201ENST00000451177 676 ntBASIC2.74□□□□□ -1.97
LDLRP01130 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.74□□□□□ -1.97
LDLRP01130 snoU109.2-201ENST00000459316 135 ntBASIC2.74□□□□□ -1.97
LDLRP01130 RNU7-23P-201ENST00000459465 62 ntBASIC2.74□□□□□ -1.97
LDLRP01130 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.74□□□□□ -1.97
LDLRP01130 AC128713.1-201ENST00000471495 306 ntBASIC2.74□□□□□ -1.97
LDLRP01130 TRBV12-1-201ENST00000479785 344 ntBASIC2.74□□□□□ -1.97
LDLRP01130 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.74□□□□□ -1.97
LDLRP01130 Y_RNA.654-201ENST00000497848 106 ntBASIC2.74□□□□□ -1.97
LDLRP01130 TRBVA-201ENST00000498804 316 ntBASIC2.74□□□□□ -1.97
LDLRP01130 TBCAP3-201ENST00000512475 312 ntBASIC2.74□□□□□ -1.97
LDLRP01130 RNU1-86P-201ENST00000516108 154 ntBASIC2.74□□□□□ -1.97
LDLRP01130 RNU1-107P-201ENST00000516617 154 ntBASIC2.74□□□□□ -1.97
LDLRP01130 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.74□□□□□ -1.97
LDLRP01130 AC022634.1-201ENST00000520765 532 ntBASIC2.74□□□□□ -1.97
LDLRP01130 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.74□□□□□ -1.97
LDLRP01130 OR11H5P-201ENST00000554039 926 ntBASIC2.74□□□□□ -1.97
LDLRP01130 CYCSP39-201ENST00000565821 309 ntBASIC2.74□□□□□ -1.97
LDLRP01130 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.74□□□□□ -1.97
LDLRP01130 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.74□□□□□ -1.97
LDLRP01130 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.74□□□□□ -1.97
LDLRP01130 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.74□□□□□ -1.97
LDLRP01130 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.74□□□□□ -1.97
LDLRP01130 AC009487.2-201ENST00000420969 6821 ntBASIC2.73□□□□□ -1.97
LDLRP01130 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LDLRP01130 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
LDLRP01130 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.73□□□□□ -1.97
LDLRP01130 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
LDLRP01130 ZNF519P1-201ENST00000449011 1626 ntBASIC2.73□□□□□ -1.97
LDLRP01130 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LDLRP01130 OR56A5-201ENST00000340110 738 ntBASIC2.73□□□□□ -1.97
LDLRP01130 MIR22-201ENST00000362190 85 ntBASIC2.73□□□□□ -1.97
LDLRP01130 RNU6-898P-201ENST00000365627 104 ntBASIC2.73□□□□□ -1.97
LDLRP01130 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LDLRP01130 Z98749.2-208ENST00000381646 500 ntBASIC2.73□□□□□ -1.97
LDLRP01130 Y_RNA.459-201ENST00000384251 102 ntBASIC2.73□□□□□ -1.97
LDLRP01130 RNU6-1105P-201ENST00000384774 107 ntBASIC2.73□□□□□ -1.97
LDLRP01130 MIR512-1-201ENST00000384913 84 ntBASIC2.73□□□□□ -1.97
LDLRP01130 MIR568-201ENST00000385036 95 ntBASIC2.73□□□□□ -1.97
LDLRP01130 MIR10A-201ENST00000385043 110 ntBASIC2.73□□□□□ -1.97
LDLRP01130 RNU2-49P-201ENST00000410666 184 ntBASIC2.73□□□□□ -1.97
LDLRP01130 RNU6-370P-201ENST00000411008 104 ntBASIC2.73□□□□□ -1.97
LDLRP01130 AC023141.4-201ENST00000412031 328 ntBASIC2.73□□□□□ -1.97
LDLRP01130 AC074085.1-201ENST00000413598 418 ntBASIC2.73□□□□□ -1.97
LDLRP01130 ARL5AP1-201ENST00000418991 388 ntBASIC2.73□□□□□ -1.97
LDLRP01130 RPL7P37-201ENST00000425095 738 ntBASIC2.73□□□□□ -1.97
LDLRP01130 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.73□□□□□ -1.97
LDLRP01130 RPS15AP5-201ENST00000436276 388 ntBASIC2.73□□□□□ -1.97
LDLRP01130 FABP5P14-201ENST00000437273 393 ntBASIC2.73□□□□□ -1.97
LDLRP01130 AL513124.1-201ENST00000450410 614 ntBASIC2.73□□□□□ -1.97
LDLRP01130 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.73□□□□□ -1.97
LDLRP01130 MTCO3P10-201ENST00000455912 772 ntBASIC2.73□□□□□ -1.97
LDLRP01130 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.73□□□□□ -1.97
LDLRP01130 RPL7P42-201ENST00000481005 679 ntBASIC2.73□□□□□ -1.97
LDLRP01130 HMGB1P30-201ENST00000492455 606 ntBASIC2.73□□□□□ -1.97
LDLRP01130 RNA5SP454-201ENST00000517231 127 ntBASIC2.73□□□□□ -1.97
LDLRP01130 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.73□□□□□ -1.97
LDLRP01130 NACAP3-201ENST00000552100 481 ntBASIC2.73□□□□□ -1.97
LDLRP01130 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.73□□□□□ -1.97
LDLRP01130 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.73□□□□□ -1.97
LDLRP01130 AL645944.1-201ENST00000603857 493 ntBASIC2.73□□□□□ -1.97
LDLRP01130 AP000654.2-201ENST00000605633 586 ntBASIC2.73□□□□□ -1.97
LDLRP01130 AL359198.2-201ENST00000611836 194 ntBASIC2.73□□□□□ -1.97
LDLRP01130 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.73□□□□□ -1.97
LDLRP01130 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.73□□□□□ -1.97
LDLRP01130 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
LDLRP01130 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LDLRP01130 ADAM3A-203ENST00000461344 2157 ntBASIC2.73□□□□□ -1.97
LDLRP01130 Y_RNA.28-201ENST00000362554 111 ntBASIC2.72□□□□□ -1.97
LDLRP01130 RNU6-1188P-201ENST00000363795 107 ntBASIC2.72□□□□□ -1.97
LDLRP01130 RNU6-82P-201ENST00000363970 107 ntBASIC2.72□□□□□ -1.97
LDLRP01130 RNU6-384P-201ENST00000364900 104 ntBASIC2.72□□□□□ -1.97
LDLRP01130 RNU6-1013P-201ENST00000384180 107 ntBASIC2.72□□□□□ -1.97
LDLRP01130 RNU6-463P-201ENST00000384340 107 ntBASIC2.72□□□□□ -1.97
LDLRP01130 RNA5SP219-201ENST00000390940 113 ntBASIC2.72□□□□□ -1.97
LDLRP01130 MTCYBP4-201ENST00000401524 249 ntBASIC2.72□□□□□ -1.97
LDLRP01130 AL356057.3-201ENST00000402607 340 ntBASIC2.72□□□□□ -1.97
LDLRP01130 POLHP1-201ENST00000411806 470 ntBASIC2.72□□□□□ -1.97
LDLRP01130 RPL37P10-201ENST00000412884 288 ntBASIC2.72□□□□□ -1.97
LDLRP01130 AL353621.1-201ENST00000418219 243 ntBASIC2.72□□□□□ -1.97
LDLRP01130 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.72□□□□□ -1.97
LDLRP01130 AC063976.3-201ENST00000426849 329 ntBASIC2.72□□□□□ -1.97
LDLRP01130 HMGB1P9-201ENST00000429856 646 ntBASIC2.72□□□□□ -1.97
LDLRP01130 AC107399.1-201ENST00000451226 265 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms