Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 COX6CP10-201ENST00000416832 224 ntBASIC0.13□□□□□ -2.39
SIX6O95475 AC123900.1-201ENST00000420390 96 ntBASIC0.13□□□□□ -2.39
SIX6O95475 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.13□□□□□ -2.39
SIX6O95475 ISCA1P6-201ENST00000427740 390 ntBASIC0.13□□□□□ -2.39
SIX6O95475 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.13□□□□□ -2.39
SIX6O95475 MTND4LP14-201ENST00000429447 288 ntBASIC0.13□□□□□ -2.39
SIX6O95475 AL591212.2-201ENST00000433923 257 ntBASIC0.13□□□□□ -2.39
SIX6O95475 MTCO3P18-201ENST00000440206 761 ntBASIC0.13□□□□□ -2.39
SIX6O95475 MTND1P30-201ENST00000441241 901 ntBASIC0.13□□□□□ -2.39
SIX6O95475 AL606517.1-201ENST00000446914 387 ntBASIC0.13□□□□□ -2.39
SIX6O95475 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.13□□□□□ -2.39
SIX6O95475 MTCO3P7-201ENST00000510008 774 ntBASIC0.13□□□□□ -2.39
SIX6O95475 RNU6-143P-201ENST00000516942 93 ntBASIC0.13□□□□□ -2.39
SIX6O95475 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.13□□□□□ -2.39
SIX6O95475 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.13□□□□□ -2.39
SIX6O95475 MIR4769-201ENST00000584126 77 ntBASIC0.13□□□□□ -2.39
SIX6O95475 BNIP3P8-201ENST00000597863 560 ntBASIC0.13□□□□□ -2.39
SIX6O95475 MTND4P21-201ENST00000453886 1357 ntBASIC0.12□□□□□ -2.39
SIX6O95475 RNU6-969P-201ENST00000383900 105 ntBASIC0.12□□□□□ -2.39
SIX6O95475 SNORA40C-201ENST00000391285 128 ntBASIC0.12□□□□□ -2.39
SIX6O95475 AC016831.2-201ENST00000417179 352 ntBASIC0.12□□□□□ -2.39
SIX6O95475 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.12□□□□□ -2.39
SIX6O95475 AL590556.1-201ENST00000423231 483 ntBASIC0.12□□□□□ -2.39
SIX6O95475 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.12□□□□□ -2.39
SIX6O95475 AL035398.1-201ENST00000430869 322 ntBASIC0.12□□□□□ -2.39
SIX6O95475 MTCO3P29-201ENST00000432119 779 ntBASIC0.12□□□□□ -2.39
SIX6O95475 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.12□□□□□ -2.39
SIX6O95475 MTCYBP1-201ENST00000454315 1119 ntBASIC0.12□□□□□ -2.39
SIX6O95475 RPL39P38-201ENST00000467018 153 ntBASIC0.12□□□□□ -2.39
SIX6O95475 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.12□□□□□ -2.39
SIX6O95475 HMGB1P30-201ENST00000492455 606 ntBASIC0.12□□□□□ -2.39
SIX6O95475 BNIP3P6-201ENST00000549284 499 ntBASIC0.12□□□□□ -2.39
SIX6O95475 AC025678.1-201ENST00000567861 338 ntBASIC0.12□□□□□ -2.39
SIX6O95475 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.12□□□□□ -2.39
SIX6O95475 MIR5000-201ENST00000577717 103 ntBASIC0.12□□□□□ -2.39
SIX6O95475 AC016727.2-201ENST00000603988 621 ntBASIC0.12□□□□□ -2.39
SIX6O95475 AC017083.3-201ENST00000609955 700 ntBASIC0.12□□□□□ -2.39
SIX6O95475 AC253576.2-201ENST00000618815 580 ntBASIC0.12□□□□□ -2.39
SIX6O95475 AC005858.4-201ENST00000623191 700 ntBASIC0.12□□□□□ -2.39
SIX6O95475 MIR340-201ENST00000362125 95 ntBASIC0.11□□□□□ -2.39
SIX6O95475 RNU6-862P-201ENST00000362804 105 ntBASIC0.11□□□□□ -2.39
SIX6O95475 RNU6-166P-201ENST00000384371 107 ntBASIC0.11□□□□□ -2.39
SIX6O95475 RNU6-549P-201ENST00000384433 107 ntBASIC0.11□□□□□ -2.39
SIX6O95475 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
SIX6O95475 AF228730.1-201ENST00000397972 663 ntBASIC0.11□□□□□ -2.39
SIX6O95475 AL359634.1-202ENST00000404721 284 ntBASIC0.11□□□□□ -2.39
SIX6O95475 RNU6-1054P-201ENST00000411293 104 ntBASIC0.11□□□□□ -2.39
SIX6O95475 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.11□□□□□ -2.39
SIX6O95475 LARP1BP3-201ENST00000437229 869 ntBASIC0.11□□□□□ -2.39
SIX6O95475 ATP5J2P3-201ENST00000451550 258 ntBASIC0.11□□□□□ -2.39
SIX6O95475 RPS29P1-201ENST00000465274 159 ntBASIC0.11□□□□□ -2.39
SIX6O95475 AC005741.1-201ENST00000511094 432 ntBASIC0.11□□□□□ -2.39
SIX6O95475 AC067942.3-201ENST00000512025 362 ntBASIC0.11□□□□□ -2.39
SIX6O95475 AC024589.1-201ENST00000512207 263 ntBASIC0.11□□□□□ -2.39
SIX6O95475 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.11□□□□□ -2.39
SIX6O95475 RNU6-496P-201ENST00000516145 99 ntBASIC0.11□□□□□ -2.39
SIX6O95475 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC0.11□□□□□ -2.39
SIX6O95475 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.11□□□□□ -2.39
SIX6O95475 MIR4709-201ENST00000577272 72 ntBASIC0.11□□□□□ -2.39
SIX6O95475 MIR151B-201ENST00000584249 96 ntBASIC0.11□□□□□ -2.39
SIX6O95475 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.11□□□□□ -2.39
SIX6O95475 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.11□□□□□ -2.39
SIX6O95475 RNU6-1123P-201ENST00000362347 106 ntBASIC0.1□□□□□ -2.39
SIX6O95475 Y_RNA.191-201ENST00000363972 113 ntBASIC0.1□□□□□ -2.39
SIX6O95475 RNU6-16P-201ENST00000384385 107 ntBASIC0.1□□□□□ -2.39
SIX6O95475 ELOCP9-201ENST00000418624 239 ntBASIC0.1□□□□□ -2.39
SIX6O95475 AC245047.7-201ENST00000440265 293 ntBASIC0.1□□□□□ -2.39
SIX6O95475 AC069257.2-201ENST00000441819 155 ntBASIC0.1□□□□□ -2.39
SIX6O95475 RNFT1P2-201ENST00000443064 757 ntBASIC0.1□□□□□ -2.39
SIX6O95475 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
SIX6O95475 AC113410.1-201ENST00000505029 247 ntBASIC0.1□□□□□ -2.39
SIX6O95475 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.1□□□□□ -2.39
SIX6O95475 ATP5EP1-201ENST00000510257 156 ntBASIC0.1□□□□□ -2.39
SIX6O95475 MIR449C-201ENST00000516047 92 ntBASIC0.1□□□□□ -2.39
SIX6O95475 OR6C7P-201ENST00000547875 934 ntBASIC0.1□□□□□ -2.39
SIX6O95475 BNIP3P9-201ENST00000603714 553 ntBASIC0.1□□□□□ -2.39
SIX6O95475 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.1□□□□□ -2.39
SIX6O95475 MIR6788-201ENST00000618842 66 ntBASIC0.1□□□□□ -2.39
SIX6O95475 AC120349.2-201ENST00000625002 298 ntBASIC0.1□□□□□ -2.39
SIX6O95475 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
SIX6O95475 RNU6-349P-201ENST00000362402 107 ntBASIC0.09□□□□□ -2.4
SIX6O95475 RNU6-707P-201ENST00000364647 95 ntBASIC0.09□□□□□ -2.4
SIX6O95475 Y_RNA.363-201ENST00000365529 113 ntBASIC0.09□□□□□ -2.4
SIX6O95475 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
SIX6O95475 RPS3AP37-201ENST00000419176 745 ntBASIC0.09□□□□□ -2.4
SIX6O95475 AC013262.1-201ENST00000426710 252 ntBASIC0.09□□□□□ -2.4
SIX6O95475 AC233266.1-201ENST00000454518 96 ntBASIC0.09□□□□□ -2.4
SIX6O95475 AC108740.1-201ENST00000498629 225 ntBASIC0.09□□□□□ -2.4
SIX6O95475 RPF2P2-201ENST00000504693 896 ntBASIC0.09□□□□□ -2.4
SIX6O95475 SNORA68.3-201ENST00000515906 83 ntBASIC0.09□□□□□ -2.4
SIX6O95475 RN7SKP12-201ENST00000516275 143 ntBASIC0.09□□□□□ -2.4
SIX6O95475 AC091163.3-201ENST00000518269 1144 ntBASIC0.09□□□□□ -2.4
SIX6O95475 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.09□□□□□ -2.4
SIX6O95475 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC0.09□□□□□ -2.4
SIX6O95475 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.09□□□□□ -2.4
SIX6O95475 ZNF971P-201ENST00000562068 1249 ntBASIC0.09□□□□□ -2.4
SIX6O95475 KC877982.1-201ENST00000602313 470 ntBASIC0.09□□□□□ -2.4
SIX6O95475 AC068620.3-201ENST00000602749 560 ntBASIC0.09□□□□□ -2.4
SIX6O95475 AL358072.1-201ENST00000604156 575 ntBASIC0.09□□□□□ -2.4
SIX6O95475 AC242852.1-201ENST00000612151 96 ntBASIC0.09□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms