Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNU6-942P-201ENST00000363002 107 ntBASIC2.51□□□□□ -2.01
PRKNO60260 RNA5SP139-201ENST00000364340 117 ntBASIC2.51□□□□□ -2.01
PRKNO60260 RNU6-1317P-201ENST00000364582 104 ntBASIC2.51□□□□□ -2.01
PRKNO60260 Y_RNA.460-201ENST00000384255 102 ntBASIC2.51□□□□□ -2.01
PRKNO60260 RNU6-790P-201ENST00000384479 105 ntBASIC2.51□□□□□ -2.01
PRKNO60260 SNORD116-29-201ENST00000384516 83 ntBASIC2.51□□□□□ -2.01
PRKNO60260 FTH1P15-201ENST00000406984 280 ntBASIC2.51□□□□□ -2.01
PRKNO60260 RNA5SP344-201ENST00000411081 104 ntBASIC2.51□□□□□ -2.01
PRKNO60260 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.51□□□□□ -2.01
PRKNO60260 NUP35P1-201ENST00000422734 947 ntBASIC2.51□□□□□ -2.01
PRKNO60260 RPS15AP10-201ENST00000432472 382 ntBASIC2.51□□□□□ -2.01
PRKNO60260 AL109933.2-201ENST00000452651 260 ntBASIC2.51□□□□□ -2.01
PRKNO60260 PCMTD1P1-201ENST00000455560 355 ntBASIC2.51□□□□□ -2.01
PRKNO60260 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.51□□□□□ -2.01
PRKNO60260 RNU6-1037P-201ENST00000459571 107 ntBASIC2.51□□□□□ -2.01
PRKNO60260 MRPL42P6-201ENST00000486397 371 ntBASIC2.51□□□□□ -2.01
PRKNO60260 HMGN1P13-201ENST00000505795 138 ntBASIC2.51□□□□□ -2.01
PRKNO60260 AC116655.1-201ENST00000508324 901 ntBASIC2.51□□□□□ -2.01
PRKNO60260 RNU6-1213P-201ENST00000517075 94 ntBASIC2.51□□□□□ -2.01
PRKNO60260 SNORA31.21-201ENST00000517180 77 ntBASIC2.51□□□□□ -2.01
PRKNO60260 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.51□□□□□ -2.01
PRKNO60260 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.51□□□□□ -2.01
PRKNO60260 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.51□□□□□ -2.01
PRKNO60260 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.51□□□□□ -2.01
PRKNO60260 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.51□□□□□ -2.01
PRKNO60260 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.51□□□□□ -2.01
PRKNO60260 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.51□□□□□ -2.01
PRKNO60260 AC006023.1-201ENST00000603944 259 ntBASIC2.51□□□□□ -2.01
PRKNO60260 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.51□□□□□ -2.01
PRKNO60260 AC004852.3-201ENST00000614131 326 ntBASIC2.51□□□□□ -2.01
PRKNO60260 AC084781.2-201ENST00000615568 161 ntBASIC2.51□□□□□ -2.01
PRKNO60260 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.51□□□□□ -2.01
PRKNO60260 AC097372.5-201ENST00000623665 376 ntBASIC2.51□□□□□ -2.01
PRKNO60260 AC090617.7-201ENST00000623952 126 ntBASIC2.51□□□□□ -2.01
PRKNO60260 U4.7-201ENST00000638126 106 ntBASIC2.51□□□□□ -2.01
PRKNO60260 MAPK10-266ENST00000641066 6555 ntBASIC2.51□□□□□ -2.01
PRKNO60260 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.51□□□□□ -2.01
PRKNO60260 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.51□□□□□ -2.01
PRKNO60260 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.51□□□□□ -2.01
PRKNO60260 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.5□□□□□ -2.01
PRKNO60260 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.5□□□□□ -2.01
PRKNO60260 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
PRKNO60260 MTND4P23-201ENST00000447723 1363 ntBASIC2.5□□□□□ -2.01
PRKNO60260 AC010680.1-201ENST00000590024 3590 ntBASIC2.5□□□□□ -2.01
PRKNO60260 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
PRKNO60260 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PRKNO60260 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PRKNO60260 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.5□□□□□ -2.01
PRKNO60260 MIR26A1-201ENST00000362205 77 ntBASIC2.5□□□□□ -2.01
PRKNO60260 RNU6-527P-201ENST00000363425 104 ntBASIC2.5□□□□□ -2.01
PRKNO60260 RNU6-1059P-201ENST00000363752 98 ntBASIC2.5□□□□□ -2.01
PRKNO60260 U8.9-201ENST00000365667 134 ntBASIC2.5□□□□□ -2.01
PRKNO60260 RNU6-933P-201ENST00000384424 107 ntBASIC2.5□□□□□ -2.01
PRKNO60260 SNORD116-20-201ENST00000384529 92 ntBASIC2.5□□□□□ -2.01
PRKNO60260 RPS20P15-201ENST00000412792 311 ntBASIC2.5□□□□□ -2.01
PRKNO60260 MTCO2P27-201ENST00000420740 428 ntBASIC2.5□□□□□ -2.01
PRKNO60260 Z82205.1-201ENST00000428456 297 ntBASIC2.5□□□□□ -2.01
PRKNO60260 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.5□□□□□ -2.01
PRKNO60260 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.5□□□□□ -2.01
PRKNO60260 AC244505.4-201ENST00000434905 287 ntBASIC2.5□□□□□ -2.01
PRKNO60260 SSXP5-201ENST00000443473 287 ntBASIC2.5□□□□□ -2.01
PRKNO60260 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.5□□□□□ -2.01
PRKNO60260 AC103975.1-201ENST00000482506 483 ntBASIC2.5□□□□□ -2.01
PRKNO60260 RPL23AP49-201ENST00000492925 468 ntBASIC2.5□□□□□ -2.01
PRKNO60260 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.5□□□□□ -2.01
PRKNO60260 Y_RNA.718-201ENST00000517110 102 ntBASIC2.5□□□□□ -2.01
PRKNO60260 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.5□□□□□ -2.01
PRKNO60260 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.5□□□□□ -2.01
PRKNO60260 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.5□□□□□ -2.01
PRKNO60260 MIR4672-201ENST00000583126 81 ntBASIC2.5□□□□□ -2.01
PRKNO60260 AC124303.1-201ENST00000605703 360 ntBASIC2.5□□□□□ -2.01
PRKNO60260 AL133255.1-201ENST00000606374 441 ntBASIC2.5□□□□□ -2.01
PRKNO60260 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.5□□□□□ -2.01
PRKNO60260 AC126177.8-201ENST00000618339 1015 ntBASIC2.5□□□□□ -2.01
PRKNO60260 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
PRKNO60260 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.5□□□□□ -2.01
PRKNO60260 KPNA2P1-201ENST00000458289 1591 ntBASIC2.49□□□□□ -2.01
PRKNO60260 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.49□□□□□ -2.01
PRKNO60260 RNU6-1188P-201ENST00000363795 107 ntBASIC2.49□□□□□ -2.01
PRKNO60260 RNU6-593P-201ENST00000364716 112 ntBASIC2.49□□□□□ -2.01
PRKNO60260 RNU6-336P-201ENST00000364891 107 ntBASIC2.49□□□□□ -2.01
PRKNO60260 RNU6-1011P-201ENST00000384668 107 ntBASIC2.49□□□□□ -2.01
PRKNO60260 MIR9-1-201ENST00000385198 89 ntBASIC2.49□□□□□ -2.01
PRKNO60260 RNY4P36-201ENST00000391116 96 ntBASIC2.49□□□□□ -2.01
PRKNO60260 SNORA26.7-201ENST00000391288 122 ntBASIC2.49□□□□□ -2.01
PRKNO60260 RNA5SP184-201ENST00000411071 108 ntBASIC2.49□□□□□ -2.01
PRKNO60260 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.49□□□□□ -2.01
PRKNO60260 USP9YP30-201ENST00000430729 455 ntBASIC2.49□□□□□ -2.01
PRKNO60260 ARL5AP4-201ENST00000430731 512 ntBASIC2.49□□□□□ -2.01
PRKNO60260 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.49□□□□□ -2.01
PRKNO60260 AL161651.1-201ENST00000440882 223 ntBASIC2.49□□□□□ -2.01
PRKNO60260 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.49□□□□□ -2.01
PRKNO60260 AC013470.1-201ENST00000453438 462 ntBASIC2.49□□□□□ -2.01
PRKNO60260 RPL30P15-201ENST00000457129 321 ntBASIC2.49□□□□□ -2.01
PRKNO60260 AC006026.2-201ENST00000457376 180 ntBASIC2.49□□□□□ -2.01
PRKNO60260 RPS29P12-201ENST00000460178 152 ntBASIC2.49□□□□□ -2.01
PRKNO60260 RPL9P9-202ENST00000466501 579 ntBASIC2.49□□□□□ -2.01
PRKNO60260 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.49□□□□□ -2.01
PRKNO60260 MTCYBP40-201ENST00000509390 1135 ntBASIC2.49□□□□□ -2.01
PRKNO60260 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms