Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 RN7SL489P-201ENST00000486185 223 ntBASIC2.46□□□□□ -2.02
SSX4O60224 RN7SL327P-201ENST00000488659 223 ntBASIC2.46□□□□□ -2.02
SSX4O60224 TRBVA-201ENST00000498804 316 ntBASIC2.46□□□□□ -2.02
SSX4O60224 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.46□□□□□ -2.02
SSX4O60224 AC018710.1-201ENST00000506509 158 ntBASIC2.46□□□□□ -2.02
SSX4O60224 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.46□□□□□ -2.02
SSX4O60224 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.46□□□□□ -2.02
SSX4O60224 MIR3162-201ENST00000581818 82 ntBASIC2.46□□□□□ -2.02
SSX4O60224 AC105245.1-201ENST00000581934 244 ntBASIC2.46□□□□□ -2.02
SSX4O60224 MIR3616-201ENST00000584070 92 ntBASIC2.46□□□□□ -2.02
SSX4O60224 AC073410.2-201ENST00000603240 332 ntBASIC2.46□□□□□ -2.02
SSX4O60224 AC069294.1-201ENST00000608397 350 ntBASIC2.46□□□□□ -2.02
SSX4O60224 AC104237.2-201ENST00000612456 443 ntBASIC2.46□□□□□ -2.02
SSX4O60224 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.46□□□□□ -2.02
SSX4O60224 RN7SL853P-201ENST00000617250 223 ntBASIC2.46□□□□□ -2.02
SSX4O60224 IGHVIII-44-202ENST00000636235 289 ntBASIC2.46□□□□□ -2.02
SSX4O60224 AC241585.2-209ENST00000638217 143 ntBASIC2.46□□□□□ -2.02
SSX4O60224 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SSX4O60224 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SSX4O60224 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SSX4O60224 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.45□□□□□ -2.02
SSX4O60224 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
SSX4O60224 RNA5SP126-201ENST00000365092 109 ntBASIC2.45□□□□□ -2.02
SSX4O60224 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SSX4O60224 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SSX4O60224 RNU1-57P-201ENST00000384491 166 ntBASIC2.45□□□□□ -2.02
SSX4O60224 RNU6-692P-201ENST00000384496 107 ntBASIC2.45□□□□□ -2.02
SSX4O60224 RNU6-831P-201ENST00000384548 107 ntBASIC2.45□□□□□ -2.02
SSX4O60224 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SSX4O60224 RNU2-23P-201ENST00000410545 195 ntBASIC2.45□□□□□ -2.02
SSX4O60224 EIF4EP4-201ENST00000424916 578 ntBASIC2.45□□□□□ -2.02
SSX4O60224 RPS15AP10-201ENST00000432472 382 ntBASIC2.45□□□□□ -2.02
SSX4O60224 USP9YP28-201ENST00000435142 589 ntBASIC2.45□□□□□ -2.02
SSX4O60224 RBMX2P4-201ENST00000441256 376 ntBASIC2.45□□□□□ -2.02
SSX4O60224 AC124916.1-201ENST00000444020 547 ntBASIC2.45□□□□□ -2.02
SSX4O60224 RPL39P29-201ENST00000447779 157 ntBASIC2.45□□□□□ -2.02
SSX4O60224 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.45□□□□□ -2.02
SSX4O60224 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.45□□□□□ -2.02
SSX4O60224 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.45□□□□□ -2.02
SSX4O60224 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.45□□□□□ -2.02
SSX4O60224 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.45□□□□□ -2.02
SSX4O60224 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.45□□□□□ -2.02
SSX4O60224 RPL39P5-202ENST00000512505 151 ntBASIC2.45□□□□□ -2.02
SSX4O60224 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.45□□□□□ -2.02
SSX4O60224 SNORA9.3-201ENST00000516383 129 ntBASIC2.45□□□□□ -2.02
SSX4O60224 RNU6-256P-201ENST00000516747 97 ntBASIC2.45□□□□□ -2.02
SSX4O60224 AC109329.1-201ENST00000518744 317 ntBASIC2.45□□□□□ -2.02
SSX4O60224 AC107953.1-201ENST00000522216 297 ntBASIC2.45□□□□□ -2.02
SSX4O60224 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
SSX4O60224 AC026371.1-201ENST00000551867 419 ntBASIC2.45□□□□□ -2.02
SSX4O60224 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.45□□□□□ -2.02
SSX4O60224 AC100830.2-201ENST00000581636 240 ntBASIC2.45□□□□□ -2.02
SSX4O60224 MIR3672-201ENST00000584290 82 ntBASIC2.45□□□□□ -2.02
SSX4O60224 MIR3942-201ENST00000585264 109 ntBASIC2.45□□□□□ -2.02
SSX4O60224 VN1R107P-201ENST00000601784 209 ntBASIC2.45□□□□□ -2.02
SSX4O60224 AC009314.1-201ENST00000603871 304 ntBASIC2.45□□□□□ -2.02
SSX4O60224 AC093913.1-201ENST00000614178 329 ntBASIC2.45□□□□□ -2.02
SSX4O60224 uc_338.15-201ENST00000615470 191 ntBASIC2.45□□□□□ -2.02
SSX4O60224 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.45□□□□□ -2.02
SSX4O60224 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
SSX4O60224 CASC19-280ENST00000642102 1351 ntBASIC2.45□□□□□ -2.02
SSX4O60224 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
SSX4O60224 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
SSX4O60224 AC135776.4-201ENST00000624300 1904 ntBASIC2.44□□□□□ -2.02
SSX4O60224 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SSX4O60224 AC002543.1-201ENST00000299783 1954 ntBASIC2.44□□□□□ -2.02
SSX4O60224 Y_RNA.40-201ENST00000362645 93 ntBASIC2.44□□□□□ -2.02
SSX4O60224 RNU6-128P-201ENST00000383976 107 ntBASIC2.44□□□□□ -2.02
SSX4O60224 MIR186-201ENST00000384988 86 ntBASIC2.44□□□□□ -2.02
SSX4O60224 AL356776.1-201ENST00000406574 447 ntBASIC2.44□□□□□ -2.02
SSX4O60224 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.44□□□□□ -2.02
SSX4O60224 UBE2V1P4-201ENST00000425374 344 ntBASIC2.44□□□□□ -2.02
SSX4O60224 AC063976.3-201ENST00000426849 329 ntBASIC2.44□□□□□ -2.02
SSX4O60224 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.44□□□□□ -2.02
SSX4O60224 AMD1P1-201ENST00000457220 922 ntBASIC2.44□□□□□ -2.02
SSX4O60224 RNU6-1037P-201ENST00000459571 107 ntBASIC2.44□□□□□ -2.02
SSX4O60224 AC080013.2-201ENST00000460866 323 ntBASIC2.44□□□□□ -2.02
SSX4O60224 RPL31P58-201ENST00000469001 379 ntBASIC2.44□□□□□ -2.02
SSX4O60224 AC140059.1-201ENST00000489238 361 ntBASIC2.44□□□□□ -2.02
SSX4O60224 AC010486.1-201ENST00000511793 424 ntBASIC2.44□□□□□ -2.02
SSX4O60224 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.44□□□□□ -2.02
SSX4O60224 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.44□□□□□ -2.02
SSX4O60224 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.44□□□□□ -2.02
SSX4O60224 AC116312.1-201ENST00000606841 314 ntBASIC2.44□□□□□ -2.02
SSX4O60224 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
SSX4O60224 AC007792.1-201ENST00000623023 402 ntBASIC2.44□□□□□ -2.02
SSX4O60224 AC009033.1-201ENST00000624279 431 ntBASIC2.44□□□□□ -2.02
SSX4O60224 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SSX4O60224 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.44□□□□□ -2.02
SSX4O60224 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
SSX4O60224 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SSX4O60224 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.43□□□□□ -2.02
SSX4O60224 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.43□□□□□ -2.02
SSX4O60224 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
SSX4O60224 AC062016.1-201ENST00000355719 319 ntBASIC2.43□□□□□ -2.02
SSX4O60224 RNU6-212P-201ENST00000362642 104 ntBASIC2.43□□□□□ -2.02
SSX4O60224 RNU1-72P-201ENST00000362976 153 ntBASIC2.43□□□□□ -2.02
SSX4O60224 RNU6-1283P-201ENST00000365314 105 ntBASIC2.43□□□□□ -2.02
SSX4O60224 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
SSX4O60224 RNA5SP181-201ENST00000410246 98 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms