Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 SCARNA17.1-201ENST00000516211 143 ntBASIC3.33□□□□□ -1.88
PRPF3O43395 SCARNA17.2-201ENST00000516334 143 ntBASIC3.33□□□□□ -1.88
PRPF3O43395 RNU6-612P-201ENST00000516909 102 ntBASIC3.33□□□□□ -1.88
PRPF3O43395 AP005902.1-201ENST00000521358 186 ntBASIC3.33□□□□□ -1.88
PRPF3O43395 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.33□□□□□ -1.88
PRPF3O43395 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.33□□□□□ -1.88
PRPF3O43395 AC022080.3-201ENST00000544433 482 ntBASIC3.33□□□□□ -1.88
PRPF3O43395 AC093732.2-201ENST00000607950 274 ntBASIC3.33□□□□□ -1.88
PRPF3O43395 AC090115.4-201ENST00000609970 188 ntBASIC3.33□□□□□ -1.88
PRPF3O43395 MIR8076-201ENST00000611401 83 ntBASIC3.33□□□□□ -1.88
PRPF3O43395 SCARNA17.4-201ENST00000614296 143 ntBASIC3.33□□□□□ -1.88
PRPF3O43395 MIR7515-201ENST00000637837 67 ntBASIC3.33□□□□□ -1.88
PRPF3O43395 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PRPF3O43395 AC026241.1-201ENST00000517873 2142 ntBASIC3.32□□□□□ -1.88
PRPF3O43395 Y_RNA.339-201ENST00000365325 102 ntBASIC3.32□□□□□ -1.88
PRPF3O43395 RNU6-596P-201ENST00000365395 98 ntBASIC3.32□□□□□ -1.88
PRPF3O43395 Y_RNA.482-201ENST00000384377 111 ntBASIC3.32□□□□□ -1.88
PRPF3O43395 MIR128-1-201ENST00000384921 82 ntBASIC3.32□□□□□ -1.88
PRPF3O43395 AL513477.1-202ENST00000417061 214 ntBASIC3.32□□□□□ -1.88
PRPF3O43395 BX276092.3-201ENST00000424182 230 ntBASIC3.32□□□□□ -1.88
PRPF3O43395 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.32□□□□□ -1.88
PRPF3O43395 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.32□□□□□ -1.88
PRPF3O43395 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.32□□□□□ -1.88
PRPF3O43395 Y_RNA.635-201ENST00000459041 101 ntBASIC3.32□□□□□ -1.88
PRPF3O43395 MTND4P17-201ENST00000470444 350 ntBASIC3.32□□□□□ -1.88
PRPF3O43395 RPS26P21-201ENST00000475397 348 ntBASIC3.32□□□□□ -1.88
PRPF3O43395 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.32□□□□□ -1.88
PRPF3O43395 AC116337.1-201ENST00000509680 687 ntBASIC3.32□□□□□ -1.88
PRPF3O43395 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.32□□□□□ -1.88
PRPF3O43395 SCARNA3-201ENST00000517097 143 ntBASIC3.32□□□□□ -1.88
PRPF3O43395 COX6CP5-201ENST00000527162 228 ntBASIC3.32□□□□□ -1.88
PRPF3O43395 AC007536.1-201ENST00000533382 349 ntBASIC3.32□□□□□ -1.88
PRPF3O43395 IMMP1LP2-201ENST00000552954 492 ntBASIC3.32□□□□□ -1.88
PRPF3O43395 AC103810.1-201ENST00000579873 453 ntBASIC3.32□□□□□ -1.88
PRPF3O43395 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.32□□□□□ -1.88
PRPF3O43395 AC078795.3-201ENST00000602913 472 ntBASIC3.32□□□□□ -1.88
PRPF3O43395 AC073410.2-201ENST00000603240 332 ntBASIC3.32□□□□□ -1.88
PRPF3O43395 AC019193.3-201ENST00000609144 554 ntBASIC3.32□□□□□ -1.88
PRPF3O43395 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.32□□□□□ -1.88
PRPF3O43395 AC241585.2-209ENST00000638217 143 ntBASIC3.32□□□□□ -1.88
PRPF3O43395 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PRPF3O43395 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PRPF3O43395 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PRPF3O43395 Z75746.1-201ENST00000440243 2080 ntBASIC3.31□□□□□ -1.88
PRPF3O43395 AC092268.1-201ENST00000342691 405 ntBASIC3.31□□□□□ -1.88
PRPF3O43395 RNU1-57P-201ENST00000384491 166 ntBASIC3.31□□□□□ -1.88
PRPF3O43395 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PRPF3O43395 RN7SKP61-201ENST00000410642 295 ntBASIC3.31□□□□□ -1.88
PRPF3O43395 RNU6-325P-201ENST00000411132 105 ntBASIC3.31□□□□□ -1.88
PRPF3O43395 RPL37P10-201ENST00000412884 288 ntBASIC3.31□□□□□ -1.88
PRPF3O43395 AL451074.5-201ENST00000415894 435 ntBASIC3.31□□□□□ -1.88
PRPF3O43395 SAR1AP4-201ENST00000429225 591 ntBASIC3.31□□□□□ -1.88
PRPF3O43395 MTND3P23-201ENST00000431980 347 ntBASIC3.31□□□□□ -1.88
PRPF3O43395 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.31□□□□□ -1.88
PRPF3O43395 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.31□□□□□ -1.88
PRPF3O43395 RPS3AP52-201ENST00000435639 297 ntBASIC3.31□□□□□ -1.88
PRPF3O43395 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PRPF3O43395 RPL39P29-201ENST00000447779 157 ntBASIC3.31□□□□□ -1.88
PRPF3O43395 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.31□□□□□ -1.88
PRPF3O43395 RN7SKP24-201ENST00000515888 284 ntBASIC3.31□□□□□ -1.88
PRPF3O43395 ACA59.1-201ENST00000515966 143 ntBASIC3.31□□□□□ -1.88
PRPF3O43395 SNORA31.6-201ENST00000516241 130 ntBASIC3.31□□□□□ -1.88
PRPF3O43395 RNU6-277P-201ENST00000516272 106 ntBASIC3.31□□□□□ -1.88
PRPF3O43395 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.31□□□□□ -1.88
PRPF3O43395 C8orf59P2-201ENST00000603441 271 ntBASIC3.31□□□□□ -1.88
PRPF3O43395 AL137843.1-201ENST00000605078 385 ntBASIC3.31□□□□□ -1.88
PRPF3O43395 AL161423.1-201ENST00000613700 262 ntBASIC3.31□□□□□ -1.88
PRPF3O43395 MIR1302-1-201ENST00000637932 143 ntBASIC3.31□□□□□ -1.88
PRPF3O43395 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PRPF3O43395 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
PRPF3O43395 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.31□□□□□ -1.88
PRPF3O43395 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PRPF3O43395 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
PRPF3O43395 RNU4-73P-201ENST00000363164 141 ntBASIC3.3□□□□□ -1.88
PRPF3O43395 RNU6-142P-201ENST00000384019 107 ntBASIC3.3□□□□□ -1.88
PRPF3O43395 Y_RNA.474-201ENST00000384341 102 ntBASIC3.3□□□□□ -1.88
PRPF3O43395 RNU6-790P-201ENST00000384479 105 ntBASIC3.3□□□□□ -1.88
PRPF3O43395 MIR512-1-201ENST00000384913 84 ntBASIC3.3□□□□□ -1.88
PRPF3O43395 MIR887-201ENST00000401258 79 ntBASIC3.3□□□□□ -1.88
PRPF3O43395 AL031121.1-201ENST00000406553 254 ntBASIC3.3□□□□□ -1.88
PRPF3O43395 RPL23AP95-201ENST00000426806 265 ntBASIC3.3□□□□□ -1.88
PRPF3O43395 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.3□□□□□ -1.88
PRPF3O43395 RNU7-187P-201ENST00000458985 68 ntBASIC3.3□□□□□ -1.88
PRPF3O43395 AC016632.1-201ENST00000503994 196 ntBASIC3.3□□□□□ -1.88
PRPF3O43395 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.3□□□□□ -1.88
PRPF3O43395 MIR3136-201ENST00000583498 78 ntBASIC3.3□□□□□ -1.88
PRPF3O43395 POLR3GP2-201ENST00000588366 668 ntBASIC3.3□□□□□ -1.88
PRPF3O43395 AC135507.2-201ENST00000612443 309 ntBASIC3.3□□□□□ -1.88
PRPF3O43395 AL359697.1-201ENST00000624879 587 ntBASIC3.3□□□□□ -1.88
PRPF3O43395 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.3□□□□□ -1.88
PRPF3O43395 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PRPF3O43395 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.3□□□□□ -1.88
PRPF3O43395 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
PRPF3O43395 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PRPF3O43395 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PRPF3O43395 RNU6-1317P-201ENST00000364582 104 ntBASIC3.29□□□□□ -1.88
PRPF3O43395 MIR544A-201ENST00000384855 91 ntBASIC3.29□□□□□ -1.88
PRPF3O43395 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
PRPF3O43395 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.29□□□□□ -1.88
PRPF3O43395 Z98742.2-201ENST00000431564 187 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms