Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 RNU6-179P-201ENST00000363350 107 ntBASIC1.51□□□□□ -2.17
LSM1O15116 RNU6-105P-201ENST00000363909 104 ntBASIC1.51□□□□□ -2.17
LSM1O15116 RNU6-160P-201ENST00000384591 107 ntBASIC1.51□□□□□ -2.17
LSM1O15116 AL627390.1-201ENST00000396055 340 ntBASIC1.51□□□□□ -2.17
LSM1O15116 RNA5SP111-201ENST00000411386 101 ntBASIC1.51□□□□□ -2.17
LSM1O15116 OOSP1P1-201ENST00000423265 274 ntBASIC1.51□□□□□ -2.17
LSM1O15116 AL593851.1-201ENST00000426171 157 ntBASIC1.51□□□□□ -2.17
LSM1O15116 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC1.51□□□□□ -2.17
LSM1O15116 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.51□□□□□ -2.17
LSM1O15116 HMGB1P18-201ENST00000438801 619 ntBASIC1.51□□□□□ -2.17
LSM1O15116 RN7SL429P-201ENST00000479090 223 ntBASIC1.51□□□□□ -2.17
LSM1O15116 RN7SL489P-201ENST00000486185 223 ntBASIC1.51□□□□□ -2.17
LSM1O15116 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.51□□□□□ -2.17
LSM1O15116 RN7SL327P-201ENST00000488659 223 ntBASIC1.51□□□□□ -2.17
LSM1O15116 AC114801.2-201ENST00000503825 781 ntBASIC1.51□□□□□ -2.17
LSM1O15116 RNU6-295P-201ENST00000516901 104 ntBASIC1.51□□□□□ -2.17
LSM1O15116 RNU2-46P-201ENST00000517038 113 ntBASIC1.51□□□□□ -2.17
LSM1O15116 AP003072.2-201ENST00000527756 676 ntBASIC1.51□□□□□ -2.17
LSM1O15116 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.51□□□□□ -2.17
LSM1O15116 AC005771.1-201ENST00000585581 349 ntBASIC1.51□□□□□ -2.17
LSM1O15116 AC009977.1-201ENST00000586015 570 ntBASIC1.51□□□□□ -2.17
LSM1O15116 AC008752.3-201ENST00000588113 712 ntBASIC1.51□□□□□ -2.17
LSM1O15116 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.51□□□□□ -2.17
LSM1O15116 AL022161.1-201ENST00000604390 213 ntBASIC1.51□□□□□ -2.17
LSM1O15116 AC104073.3-201ENST00000610942 955 ntBASIC1.51□□□□□ -2.17
LSM1O15116 RN7SL853P-201ENST00000617250 223 ntBASIC1.51□□□□□ -2.17
LSM1O15116 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
LSM1O15116 MTND4P23-201ENST00000447723 1363 ntBASIC1.5□□□□□ -2.17
LSM1O15116 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.5□□□□□ -2.17
LSM1O15116 RNU6-23P-201ENST00000363283 107 ntBASIC1.5□□□□□ -2.17
LSM1O15116 MIR544A-201ENST00000384855 91 ntBASIC1.5□□□□□ -2.17
LSM1O15116 AC243964.1-201ENST00000441814 261 ntBASIC1.5□□□□□ -2.17
LSM1O15116 ZNF114P1-201ENST00000453500 292 ntBASIC1.5□□□□□ -2.17
LSM1O15116 FABP5P5-201ENST00000515537 406 ntBASIC1.5□□□□□ -2.17
LSM1O15116 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.5□□□□□ -2.17
LSM1O15116 BNIP3P39-201ENST00000601077 554 ntBASIC1.5□□□□□ -2.17
LSM1O15116 AP000654.2-201ENST00000605633 586 ntBASIC1.5□□□□□ -2.17
LSM1O15116 AC004223.4-201ENST00000612426 332 ntBASIC1.5□□□□□ -2.17
LSM1O15116 AL590240.4-201ENST00000616908 390 ntBASIC1.5□□□□□ -2.17
LSM1O15116 MTND5P17-201ENST00000418405 1603 ntBASIC1.5□□□□□ -2.17
LSM1O15116 AC006026.1-201ENST00000444025 1803 ntBASIC1.5□□□□□ -2.17
LSM1O15116 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.49□□□□□ -2.17
LSM1O15116 MIR340-201ENST00000362125 95 ntBASIC1.49□□□□□ -2.17
LSM1O15116 SNORA20.2-201ENST00000383922 131 ntBASIC1.49□□□□□ -2.17
LSM1O15116 MIR320A-201ENST00000385302 82 ntBASIC1.49□□□□□ -2.17
LSM1O15116 RNU2-8P-201ENST00000410727 190 ntBASIC1.49□□□□□ -2.17
LSM1O15116 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.49□□□□□ -2.17
LSM1O15116 OR6C66P-201ENST00000414917 930 ntBASIC1.49□□□□□ -2.17
LSM1O15116 TOMM20P4-201ENST00000427861 435 ntBASIC1.49□□□□□ -2.17
LSM1O15116 AL591043.1-201ENST00000432461 424 ntBASIC1.49□□□□□ -2.17
LSM1O15116 AC104850.1-201ENST00000435940 476 ntBASIC1.49□□□□□ -2.17
LSM1O15116 MTND1P30-201ENST00000441241 901 ntBASIC1.49□□□□□ -2.17
LSM1O15116 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.49□□□□□ -2.17
LSM1O15116 RPS29P23-201ENST00000458635 123 ntBASIC1.49□□□□□ -2.17
LSM1O15116 RNU1-131P-201ENST00000458943 161 ntBASIC1.49□□□□□ -2.17
LSM1O15116 snoU13.26-201ENST00000459452 105 ntBASIC1.49□□□□□ -2.17
LSM1O15116 AC022447.4-201ENST00000504053 364 ntBASIC1.49□□□□□ -2.17
LSM1O15116 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.49□□□□□ -2.17
LSM1O15116 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.49□□□□□ -2.17
LSM1O15116 AC115990.1-201ENST00000526957 301 ntBASIC1.49□□□□□ -2.17
LSM1O15116 AC011494.1-201ENST00000596454 237 ntBASIC1.49□□□□□ -2.17
LSM1O15116 AP001485.1-201ENST00000604799 199 ntBASIC1.49□□□□□ -2.17
LSM1O15116 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
LSM1O15116 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.48□□□□□ -2.17
LSM1O15116 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.48□□□□□ -2.17
LSM1O15116 RNU6-439P-201ENST00000384188 106 ntBASIC1.48□□□□□ -2.17
LSM1O15116 RNU6-45P-201ENST00000384471 107 ntBASIC1.48□□□□□ -2.17
LSM1O15116 MIR150-201ENST00000385048 84 ntBASIC1.48□□□□□ -2.17
LSM1O15116 MIR504-201ENST00000385065 83 ntBASIC1.48□□□□□ -2.17
LSM1O15116 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
LSM1O15116 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.48□□□□□ -2.17
LSM1O15116 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.48□□□□□ -2.17
LSM1O15116 GTF2IP13-201ENST00000438487 386 ntBASIC1.48□□□□□ -2.17
LSM1O15116 AC007677.1-201ENST00000445757 515 ntBASIC1.48□□□□□ -2.17
LSM1O15116 MTCYBP1-201ENST00000454315 1119 ntBASIC1.48□□□□□ -2.17
LSM1O15116 AMD1P1-201ENST00000457220 922 ntBASIC1.48□□□□□ -2.17
LSM1O15116 AC005178.1-201ENST00000508392 440 ntBASIC1.48□□□□□ -2.17
LSM1O15116 AC104136.1-201ENST00000512969 394 ntBASIC1.48□□□□□ -2.17
LSM1O15116 SNORA31.17-201ENST00000516953 127 ntBASIC1.48□□□□□ -2.17
LSM1O15116 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.48□□□□□ -2.17
LSM1O15116 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.48□□□□□ -2.17
LSM1O15116 AC008269.2-201ENST00000561915 1105 ntBASIC1.48□□□□□ -2.17
LSM1O15116 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.48□□□□□ -2.17
LSM1O15116 AC005786.1-201ENST00000588553 154 ntBASIC1.48□□□□□ -2.17
LSM1O15116 AL034555.1-201ENST00000604816 211 ntBASIC1.48□□□□□ -2.17
LSM1O15116 BX248123.2-201ENST00000606318 124 ntBASIC1.48□□□□□ -2.17
LSM1O15116 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.48□□□□□ -2.17
LSM1O15116 MIR7974-201ENST00000615835 79 ntBASIC1.48□□□□□ -2.17
LSM1O15116 AC011155.2-201ENST00000623202 216 ntBASIC1.48□□□□□ -2.17
LSM1O15116 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
LSM1O15116 AP000648.3-201ENST00000623539 4507 ntBASIC1.48□□□□□ -2.17
LSM1O15116 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
LSM1O15116 MTND5P9-201ENST00000503854 1755 ntBASIC1.47□□□□□ -2.17
LSM1O15116 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.47□□□□□ -2.17
LSM1O15116 RNU6-550P-201ENST00000391057 101 ntBASIC1.47□□□□□ -2.17
LSM1O15116 AL357139.1-201ENST00000407792 426 ntBASIC1.47□□□□□ -2.17
LSM1O15116 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.47□□□□□ -2.17
LSM1O15116 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.47□□□□□ -2.17
LSM1O15116 AC013470.1-201ENST00000453438 462 ntBASIC1.47□□□□□ -2.17
LSM1O15116 AC112492.4-201ENST00000456549 352 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms