Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 Y_RNA.597-201ENST00000410463 100 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.07□□□□□ -2.24
UBFD1O14562 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.07□□□□□ -2.24
UBFD1O14562 AC245102.2-201ENST00000448956 180 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.07□□□□□ -2.24
UBFD1O14562 AL009048.1-201ENST00000450437 298 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.07□□□□□ -2.24
UBFD1O14562 snoU13.14-201ENST00000459372 104 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.07□□□□□ -2.24
UBFD1O14562 MTCYBP40-201ENST00000509390 1135 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.07□□□□□ -2.24
UBFD1O14562 AC092436.3-201ENST00000511788 257 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 AC112206.4-201ENST00000515142 405 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 Y_RNA.670-201ENST00000516255 105 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 SNORA44.1-201ENST00000517031 108 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 AC018630.3-201ENST00000542637 96 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.07□□□□□ -2.24
UBFD1O14562 ZNF519P3-201ENST00000557158 1032 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.07□□□□□ -2.24
UBFD1O14562 MIR4509-3-201ENST00000578671 94 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 MIR4509-2-201ENST00000583920 94 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 AL138889.2-201ENST00000603883 242 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 AP001485.1-201ENST00000604799 199 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 AP002360.4-201ENST00000606980 481 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 MIR4509-1-201ENST00000618224 94 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 AL159153.1-201ENST00000619688 317 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 MIR6515-201ENST00000619843 57 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 U1.36-201ENST00000620684 176 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.07□□□□□ -2.24
UBFD1O14562 OR4G3P-201ENST00000633500 913 ntBASIC1.07□□□□□ -2.24
UBFD1O14562 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.07□□□□□ -2.24
UBFD1O14562 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
UBFD1O14562 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.07□□□□□ -2.24
UBFD1O14562 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
UBFD1O14562 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.07□□□□□ -2.24
UBFD1O14562 RNY4P24-201ENST00000362735 96 ntBASIC1.06□□□□□ -2.24
UBFD1O14562 RNU1-22P-201ENST00000363334 158 ntBASIC1.06□□□□□ -2.24
UBFD1O14562 SNORD114-27-201ENST00000363766 70 ntBASIC1.06□□□□□ -2.24
UBFD1O14562 SNORD26-201ENST00000384147 75 ntBASIC1.06□□□□□ -2.24
UBFD1O14562 RNU6-39P-201ENST00000384344 107 ntBASIC1.06□□□□□ -2.24
UBFD1O14562 RNU6-1179P-201ENST00000384667 107 ntBASIC1.06□□□□□ -2.24
UBFD1O14562 MIR513A1-201ENST00000385138 129 ntBASIC1.06□□□□□ -2.24
UBFD1O14562 SNORA48.1-201ENST00000390879 135 ntBASIC1.06□□□□□ -2.24
UBFD1O14562 RNU6-1176P-201ENST00000390955 107 ntBASIC1.06□□□□□ -2.24
UBFD1O14562 RPS3AP36-201ENST00000398190 775 ntBASIC1.06□□□□□ -2.24
UBFD1O14562 RNA5SP390-201ENST00000410191 113 ntBASIC1.06□□□□□ -2.24
UBFD1O14562 RPL22P18-201ENST00000417197 377 ntBASIC1.06□□□□□ -2.24
UBFD1O14562 AC007283.2-201ENST00000424739 197 ntBASIC1.06□□□□□ -2.24
UBFD1O14562 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.06□□□□□ -2.24
UBFD1O14562 MTND1P32-201ENST00000433043 938 ntBASIC1.06□□□□□ -2.24
UBFD1O14562 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.06□□□□□ -2.24
UBFD1O14562 NDUFB1P2-201ENST00000449477 176 ntBASIC1.06□□□□□ -2.24
UBFD1O14562 AC010409.1-201ENST00000487382 476 ntBASIC1.06□□□□□ -2.24
UBFD1O14562 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.06□□□□□ -2.24
UBFD1O14562 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.06□□□□□ -2.24
UBFD1O14562 RNU1-86P-201ENST00000516108 154 ntBASIC1.06□□□□□ -2.24
UBFD1O14562 RNU6-123P-201ENST00000516163 102 ntBASIC1.06□□□□□ -2.24
UBFD1O14562 RNU1-107P-201ENST00000516617 154 ntBASIC1.06□□□□□ -2.24
UBFD1O14562 RNA5SP480-201ENST00000516840 109 ntBASIC1.06□□□□□ -2.24
UBFD1O14562 RNA5SP337-201ENST00000517007 109 ntBASIC1.06□□□□□ -2.24
UBFD1O14562 RN7SKP256-201ENST00000517201 314 ntBASIC1.06□□□□□ -2.24
UBFD1O14562 RRN3P3-201ENST00000549207 578 ntBASIC1.06□□□□□ -2.24
UBFD1O14562 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.06□□□□□ -2.24
UBFD1O14562 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.06□□□□□ -2.24
UBFD1O14562 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.06□□□□□ -2.24
UBFD1O14562 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.06□□□□□ -2.24
UBFD1O14562 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.06□□□□□ -2.24
UBFD1O14562 SNORD56.2-201ENST00000363242 71 ntBASIC1.05□□□□□ -2.24
UBFD1O14562 Y_RNA.112-201ENST00000363250 102 ntBASIC1.05□□□□□ -2.24
UBFD1O14562 RNA5SP493-201ENST00000364115 91 ntBASIC1.05□□□□□ -2.24
UBFD1O14562 RNU6-906P-201ENST00000384700 70 ntBASIC1.05□□□□□ -2.24
UBFD1O14562 RPS15AP10-201ENST00000432472 382 ntBASIC1.05□□□□□ -2.24
UBFD1O14562 USP9YP17-201ENST00000444617 696 ntBASIC1.05□□□□□ -2.24
UBFD1O14562 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.05□□□□□ -2.24
UBFD1O14562 AL360271.2-201ENST00000447710 161 ntBASIC1.05□□□□□ -2.24
UBFD1O14562 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.05□□□□□ -2.24
UBFD1O14562 AL122001.1-201ENST00000457027 370 ntBASIC1.05□□□□□ -2.24
UBFD1O14562 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.05□□□□□ -2.24
UBFD1O14562 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.05□□□□□ -2.24
UBFD1O14562 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.05□□□□□ -2.24
UBFD1O14562 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.05□□□□□ -2.24
UBFD1O14562 MTCO3P9-201ENST00000506989 781 ntBASIC1.05□□□□□ -2.24
UBFD1O14562 RBBP4P6-201ENST00000508098 202 ntBASIC1.05□□□□□ -2.24
UBFD1O14562 MIR449C-201ENST00000516047 92 ntBASIC1.05□□□□□ -2.24
UBFD1O14562 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.05□□□□□ -2.24
UBFD1O14562 AP003181.2-201ENST00000528941 181 ntBASIC1.05□□□□□ -2.24
UBFD1O14562 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.05□□□□□ -2.24
UBFD1O14562 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.05□□□□□ -2.24
UBFD1O14562 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.05□□□□□ -2.24
UBFD1O14562 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.05□□□□□ -2.24
UBFD1O14562 MIR548AC-201ENST00000585049 88 ntBASIC1.05□□□□□ -2.24
UBFD1O14562 CYP2C61P-201ENST00000604072 290 ntBASIC1.05□□□□□ -2.24
UBFD1O14562 AC112187.2-201ENST00000604345 283 ntBASIC1.05□□□□□ -2.24
UBFD1O14562 AC121334.2-201ENST00000605387 271 ntBASIC1.05□□□□□ -2.24
UBFD1O14562 AC080078.3-201ENST00000605407 463 ntBASIC1.05□□□□□ -2.24
UBFD1O14562 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.05□□□□□ -2.24
UBFD1O14562 AL590240.4-201ENST00000616908 390 ntBASIC1.05□□□□□ -2.24
UBFD1O14562 AC131159.1-201ENST00000621854 213 ntBASIC1.05□□□□□ -2.24
UBFD1O14562 RMST_7.1-201ENST00000621935 268 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 190.3 ms