Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC008250.2-201ENST00000615261 205 ntBASIC2.26□□□□□ -2.05
CUX2O14529 CENPCP1-201ENST00000533085 2578 ntBASIC2.26□□□□□ -2.05
CUX2O14529 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CUX2O14529 SNORA6-201ENST00000384033 151 ntBASIC2.25□□□□□ -2.05
CUX2O14529 RNU6-39P-201ENST00000384344 107 ntBASIC2.25□□□□□ -2.05
CUX2O14529 MIR558-201ENST00000384920 94 ntBASIC2.25□□□□□ -2.05
CUX2O14529 RPS3AP36-201ENST00000398190 775 ntBASIC2.25□□□□□ -2.05
CUX2O14529 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.25□□□□□ -2.05
CUX2O14529 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC2.25□□□□□ -2.05
CUX2O14529 RPL30P4-201ENST00000429309 333 ntBASIC2.25□□□□□ -2.05
CUX2O14529 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.25□□□□□ -2.05
CUX2O14529 PGBD4P3-201ENST00000440731 581 ntBASIC2.25□□□□□ -2.05
CUX2O14529 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.25□□□□□ -2.05
CUX2O14529 Y_RNA.675-201ENST00000516389 149 ntBASIC2.25□□□□□ -2.05
CUX2O14529 AP003033.1-201ENST00000527244 415 ntBASIC2.25□□□□□ -2.05
CUX2O14529 LRRC34P1-201ENST00000542742 915 ntBASIC2.25□□□□□ -2.05
CUX2O14529 MIR548AB-201ENST00000584917 84 ntBASIC2.25□□□□□ -2.05
CUX2O14529 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.25□□□□□ -2.05
CUX2O14529 AL442644.1-201ENST00000454390 3105 ntBASIC2.24□□□□□ -2.05
CUX2O14529 FTH1P15-201ENST00000406984 280 ntBASIC2.24□□□□□ -2.05
CUX2O14529 RPS3AP3-201ENST00000411933 242 ntBASIC2.24□□□□□ -2.05
CUX2O14529 AL365338.1-201ENST00000422282 858 ntBASIC2.24□□□□□ -2.05
CUX2O14529 AC098934.3-201ENST00000430450 190 ntBASIC2.24□□□□□ -2.05
CUX2O14529 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC2.24□□□□□ -2.05
CUX2O14529 RPS24P1-201ENST00000438550 371 ntBASIC2.24□□□□□ -2.05
CUX2O14529 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.24□□□□□ -2.05
CUX2O14529 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.24□□□□□ -2.05
CUX2O14529 Vault.3-201ENST00000516676 95 ntBASIC2.24□□□□□ -2.05
CUX2O14529 AC087883.1-201ENST00000551882 391 ntBASIC2.24□□□□□ -2.05
CUX2O14529 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC2.24□□□□□ -2.05
CUX2O14529 NIFKP6-201ENST00000598115 845 ntBASIC2.24□□□□□ -2.05
CUX2O14529 RNU6-91P-201ENST00000607774 107 ntBASIC2.24□□□□□ -2.05
CUX2O14529 AP000770.2-201ENST00000623694 100 ntBASIC2.24□□□□□ -2.05
CUX2O14529 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CUX2O14529 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CUX2O14529 MIR412-201ENST00000362142 91 ntBASIC2.23□□□□□ -2.05
CUX2O14529 MIR373-201ENST00000362273 69 ntBASIC2.23□□□□□ -2.05
CUX2O14529 SNORD114-19-201ENST00000363072 75 ntBASIC2.23□□□□□ -2.05
CUX2O14529 SNORA24.1-201ENST00000384401 135 ntBASIC2.23□□□□□ -2.05
CUX2O14529 MT-TH-201ENST00000387441 69 ntBASIC2.23□□□□□ -2.05
CUX2O14529 SNORA40.3-201ENST00000390964 122 ntBASIC2.23□□□□□ -2.05
CUX2O14529 CISD1P1-201ENST00000393907 327 ntBASIC2.23□□□□□ -2.05
CUX2O14529 RN7SKP158-201ENST00000410453 326 ntBASIC2.23□□□□□ -2.05
CUX2O14529 Y_RNA.623-201ENST00000411128 95 ntBASIC2.23□□□□□ -2.05
CUX2O14529 HMGN1P14-201ENST00000412459 517 ntBASIC2.23□□□□□ -2.05
CUX2O14529 AC138623.1-201ENST00000418060 216 ntBASIC2.23□□□□□ -2.05
CUX2O14529 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.23□□□□□ -2.05
CUX2O14529 AL627311.1-201ENST00000431514 115 ntBASIC2.23□□□□□ -2.05
CUX2O14529 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.23□□□□□ -2.05
CUX2O14529 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.23□□□□□ -2.05
CUX2O14529 MTND6P13-201ENST00000443510 523 ntBASIC2.23□□□□□ -2.05
CUX2O14529 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CUX2O14529 ART2BP-201ENST00000453501 499 ntBASIC2.23□□□□□ -2.05
CUX2O14529 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.23□□□□□ -2.05
CUX2O14529 RNU6-123P-201ENST00000516163 102 ntBASIC2.23□□□□□ -2.05
CUX2O14529 AP005902.1-201ENST00000521358 186 ntBASIC2.23□□□□□ -2.05
CUX2O14529 AL355297.2-201ENST00000604792 129 ntBASIC2.23□□□□□ -2.05
CUX2O14529 AC068276.1-201ENST00000605793 379 ntBASIC2.23□□□□□ -2.05
CUX2O14529 AC091304.9-201ENST00000612091 226 ntBASIC2.23□□□□□ -2.05
CUX2O14529 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.23□□□□□ -2.05
CUX2O14529 AC092656.1-203ENST00000624134 423 ntBASIC2.23□□□□□ -2.05
CUX2O14529 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.23□□□□□ -2.05
CUX2O14529 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CUX2O14529 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.23□□□□□ -2.05
CUX2O14529 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.22□□□□□ -2.05
CUX2O14529 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CUX2O14529 RNA5SP240-201ENST00000365355 128 ntBASIC2.22□□□□□ -2.05
CUX2O14529 MIR518D-201ENST00000385014 87 ntBASIC2.22□□□□□ -2.05
CUX2O14529 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.22□□□□□ -2.05
CUX2O14529 AL160275.3-201ENST00000423876 471 ntBASIC2.22□□□□□ -2.05
CUX2O14529 EIF4EP4-201ENST00000424916 578 ntBASIC2.22□□□□□ -2.05
CUX2O14529 MED13P1-201ENST00000428342 171 ntBASIC2.22□□□□□ -2.05
CUX2O14529 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.22□□□□□ -2.05
CUX2O14529 AL353706.1-201ENST00000436728 494 ntBASIC2.22□□□□□ -2.05
CUX2O14529 AC092989.1-201ENST00000481235 277 ntBASIC2.22□□□□□ -2.05
CUX2O14529 AC011005.2-201ENST00000487324 359 ntBASIC2.22□□□□□ -2.05
CUX2O14529 AC010486.2-201ENST00000505572 483 ntBASIC2.22□□□□□ -2.05
CUX2O14529 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.22□□□□□ -2.05
CUX2O14529 AC105313.1-201ENST00000509121 353 ntBASIC2.22□□□□□ -2.05
CUX2O14529 AF213884.2-201ENST00000510417 903 ntBASIC2.22□□□□□ -2.05
CUX2O14529 MIR892C-201ENST00000516410 77 ntBASIC2.22□□□□□ -2.05
CUX2O14529 AC009127.3-201ENST00000570531 403 ntBASIC2.22□□□□□ -2.05
CUX2O14529 MIR5692A1-201ENST00000580523 69 ntBASIC2.22□□□□□ -2.05
CUX2O14529 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.22□□□□□ -2.05
CUX2O14529 DEFB131E-202ENST00000602581 683 ntBASIC2.22□□□□□ -2.05
CUX2O14529 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CUX2O14529 U8.3-201ENST00000363321 132 ntBASIC2.21□□□□□ -2.06
CUX2O14529 RNA5SP125-201ENST00000364843 120 ntBASIC2.21□□□□□ -2.06
CUX2O14529 RNU6-169P-201ENST00000365336 107 ntBASIC2.21□□□□□ -2.06
CUX2O14529 RNU6-1179P-201ENST00000384667 107 ntBASIC2.21□□□□□ -2.06
CUX2O14529 AL049545.1-201ENST00000401856 572 ntBASIC2.21□□□□□ -2.06
CUX2O14529 RNU2-63P-201ENST00000410792 194 ntBASIC2.21□□□□□ -2.06
CUX2O14529 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.21□□□□□ -2.06
CUX2O14529 CYCSP46-201ENST00000423569 204 ntBASIC2.21□□□□□ -2.06
CUX2O14529 AC104850.1-201ENST00000435940 476 ntBASIC2.21□□□□□ -2.06
CUX2O14529 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.21□□□□□ -2.06
CUX2O14529 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.21□□□□□ -2.06
CUX2O14529 SNRPGP13-201ENST00000442212 177 ntBASIC2.21□□□□□ -2.06
CUX2O14529 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.21□□□□□ -2.06
CUX2O14529 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms