Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 AC116165.2-201ENST00000616705 206 ntBASIC1.36□□□□□ -2.19
DFFAO00273 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.36□□□□□ -2.19
DFFAO00273 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
DFFAO00273 Y_RNA.22-201ENST00000362492 102 ntBASIC1.35□□□□□ -2.19
DFFAO00273 RNU6-23P-201ENST00000363283 107 ntBASIC1.35□□□□□ -2.19
DFFAO00273 RNU6-61P-201ENST00000365528 109 ntBASIC1.35□□□□□ -2.19
DFFAO00273 RNU6-160P-201ENST00000384591 107 ntBASIC1.35□□□□□ -2.19
DFFAO00273 RNA5SP111-201ENST00000411386 101 ntBASIC1.35□□□□□ -2.19
DFFAO00273 RPL21P90-201ENST00000415692 466 ntBASIC1.35□□□□□ -2.19
DFFAO00273 AC098592.1-201ENST00000419352 333 ntBASIC1.35□□□□□ -2.19
DFFAO00273 AL590556.1-201ENST00000423231 483 ntBASIC1.35□□□□□ -2.19
DFFAO00273 AL122001.1-201ENST00000457027 370 ntBASIC1.35□□□□□ -2.19
DFFAO00273 FAM206BP-201ENST00000510179 541 ntBASIC1.35□□□□□ -2.19
DFFAO00273 MIR5692A1-201ENST00000580523 69 ntBASIC1.35□□□□□ -2.19
DFFAO00273 AC005014.3-201ENST00000605985 190 ntBASIC1.35□□□□□ -2.19
DFFAO00273 AC006927.3-201ENST00000638789 384 ntBASIC1.35□□□□□ -2.19
DFFAO00273 SNORA7.1-201ENST00000363750 139 ntBASIC1.34□□□□□ -2.19
DFFAO00273 SNORA62.1-201ENST00000364287 154 ntBASIC1.34□□□□□ -2.19
DFFAO00273 RNU5E-7P-201ENST00000365290 117 ntBASIC1.34□□□□□ -2.19
DFFAO00273 MIR758-201ENST00000390227 88 ntBASIC1.34□□□□□ -2.19
DFFAO00273 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.34□□□□□ -2.19
DFFAO00273 AP1B1P2-201ENST00000416196 106 ntBASIC1.34□□□□□ -2.19
DFFAO00273 CALM2P2-201ENST00000428512 440 ntBASIC1.34□□□□□ -2.19
DFFAO00273 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.34□□□□□ -2.19
DFFAO00273 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.34□□□□□ -2.19
DFFAO00273 RNA5SP458-201ENST00000516188 119 ntBASIC1.34□□□□□ -2.19
DFFAO00273 AP005597.4-201ENST00000526762 229 ntBASIC1.34□□□□□ -2.19
DFFAO00273 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.34□□□□□ -2.19
DFFAO00273 MIR3169-201ENST00000578032 83 ntBASIC1.34□□□□□ -2.19
DFFAO00273 AC131159.1-201ENST00000621854 213 ntBASIC1.34□□□□□ -2.19
DFFAO00273 AL359740.1-201ENST00000624340 592 ntBASIC1.34□□□□□ -2.19
DFFAO00273 AC019226.2-201ENST00000625973 424 ntBASIC1.34□□□□□ -2.19
DFFAO00273 AC007671.2-201ENST00000637344 619 ntBASIC1.34□□□□□ -2.19
DFFAO00273 RNU6-500P-201ENST00000362349 107 ntBASIC1.33□□□□□ -2.2
DFFAO00273 RNA5SP493-201ENST00000364115 91 ntBASIC1.33□□□□□ -2.2
DFFAO00273 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
DFFAO00273 C1DP2-201ENST00000418167 426 ntBASIC1.33□□□□□ -2.2
DFFAO00273 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.33□□□□□ -2.2
DFFAO00273 AL512286.1-201ENST00000439244 400 ntBASIC1.33□□□□□ -2.2
DFFAO00273 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.33□□□□□ -2.2
DFFAO00273 AL357134.1-201ENST00000445848 426 ntBASIC1.33□□□□□ -2.2
DFFAO00273 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.33□□□□□ -2.2
DFFAO00273 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.33□□□□□ -2.2
DFFAO00273 AC004223.1-201ENST00000479840 271 ntBASIC1.33□□□□□ -2.2
DFFAO00273 TPT1P8-201ENST00000510120 555 ntBASIC1.33□□□□□ -2.2
DFFAO00273 RNU6-685P-201ENST00000517088 95 ntBASIC1.33□□□□□ -2.2
DFFAO00273 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.33□□□□□ -2.2
DFFAO00273 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.33□□□□□ -2.2
DFFAO00273 AP002453.2-201ENST00000533503 320 ntBASIC1.33□□□□□ -2.2
DFFAO00273 AL160236.1-201ENST00000556317 195 ntBASIC1.33□□□□□ -2.2
DFFAO00273 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.33□□□□□ -2.2
DFFAO00273 HMGN1P30-201ENST00000589286 268 ntBASIC1.33□□□□□ -2.2
DFFAO00273 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.33□□□□□ -2.2
DFFAO00273 AP000654.2-201ENST00000605633 586 ntBASIC1.33□□□□□ -2.2
DFFAO00273 AL451064.1-201ENST00000607718 471 ntBASIC1.33□□□□□ -2.2
DFFAO00273 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.33□□□□□ -2.2
DFFAO00273 AL590240.4-201ENST00000616908 390 ntBASIC1.33□□□□□ -2.2
DFFAO00273 AC009878.1-201ENST00000621819 340 ntBASIC1.33□□□□□ -2.2
DFFAO00273 AC130454.1-201ENST00000622948 401 ntBASIC1.33□□□□□ -2.2
DFFAO00273 AL078595.3-201ENST00000623815 1166 ntBASIC1.33□□□□□ -2.2
DFFAO00273 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.33□□□□□ -2.2
DFFAO00273 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
DFFAO00273 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
DFFAO00273 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.32□□□□□ -2.2
DFFAO00273 RNU6-439P-201ENST00000384188 106 ntBASIC1.32□□□□□ -2.2
DFFAO00273 RNU6-387P-201ENST00000411331 105 ntBASIC1.32□□□□□ -2.2
DFFAO00273 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.32□□□□□ -2.2
DFFAO00273 AL591043.1-201ENST00000432461 424 ntBASIC1.32□□□□□ -2.2
DFFAO00273 AC000111.3-201ENST00000433478 193 ntBASIC1.32□□□□□ -2.2
DFFAO00273 KATNBL1P3-201ENST00000443475 909 ntBASIC1.32□□□□□ -2.2
DFFAO00273 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.32□□□□□ -2.2
DFFAO00273 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.32□□□□□ -2.2
DFFAO00273 MTND2P39-201ENST00000457230 764 ntBASIC1.32□□□□□ -2.2
DFFAO00273 MTND3P25-201ENST00000509243 135 ntBASIC1.32□□□□□ -2.2
DFFAO00273 RNU5F-2P-201ENST00000516066 82 ntBASIC1.32□□□□□ -2.2
DFFAO00273 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.32□□□□□ -2.2
DFFAO00273 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.32□□□□□ -2.2
DFFAO00273 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.32□□□□□ -2.2
DFFAO00273 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.32□□□□□ -2.2
DFFAO00273 MIR3124-201ENST00000582636 67 ntBASIC1.32□□□□□ -2.2
DFFAO00273 AC073539.2-201ENST00000597113 165 ntBASIC1.32□□□□□ -2.2
DFFAO00273 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.32□□□□□ -2.2
DFFAO00273 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
DFFAO00273 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
DFFAO00273 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
DFFAO00273 AL161722.3-201ENST00000605789 2983 ntBASIC1.31□□□□□ -2.2
DFFAO00273 RNU6-179P-201ENST00000363350 107 ntBASIC1.31□□□□□ -2.2
DFFAO00273 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.31□□□□□ -2.2
DFFAO00273 RNU6-1222P-201ENST00000384615 107 ntBASIC1.31□□□□□ -2.2
DFFAO00273 MIR544A-201ENST00000384855 91 ntBASIC1.31□□□□□ -2.2
DFFAO00273 AL357139.1-201ENST00000407792 426 ntBASIC1.31□□□□□ -2.2
DFFAO00273 RNU2-3P-201ENST00000410144 191 ntBASIC1.31□□□□□ -2.2
DFFAO00273 NCOR1P3-201ENST00000420479 303 ntBASIC1.31□□□□□ -2.2
DFFAO00273 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.31□□□□□ -2.2
DFFAO00273 MTCO3P46-201ENST00000425787 232 ntBASIC1.31□□□□□ -2.2
DFFAO00273 SDAD1P3-201ENST00000427380 333 ntBASIC1.31□□□□□ -2.2
DFFAO00273 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.31□□□□□ -2.2
DFFAO00273 MTCYBP39-201ENST00000437562 491 ntBASIC1.31□□□□□ -2.2
DFFAO00273 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.31□□□□□ -2.2
DFFAO00273 HSPE1P24-201ENST00000450782 238 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 317.7 ms