Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 RNU1-18P-201ENST00000363062 164 ntBASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 Y_RNA.145-201ENST00000363527 102 ntBASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 Y_RNA.158-201ENST00000363651 101 ntBASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 RNU6-99P-201ENST00000364721 107 ntBASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 SNORA26.3-201ENST00000391119 136 ntBASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 AC004552.1-201ENST00000419089 348 ntBASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 AC004383.1-201ENST00000438135 289 ntBASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 IFNA11P-201ENST00000446352 526 ntBASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 RPS26P3-201ENST00000470205 348 ntBASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 AC090543.2-201ENST00000483963 348 ntBASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 AC004057.1-201ENST00000485827 348 ntBASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 Y_RNA.661-201ENST00000516003 99 ntBASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 RNU6-327P-201ENST00000516270 127 ntBASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 RNU7-4P-201ENST00000516961 62 ntBASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 RNU6-548P-201ENST00000517083 115 ntBASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 AL590705.4-201ENST00000532209 134 ntBASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 MIR5571-201ENST00000577998 113 ntBASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.84□□□□□ -1.79
CCDC85CA6NKD9 AC007256.1-201ENST00000392253 2765 ntBASIC3.84□□□□□ -1.8
CCDC85CA6NKD9 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 RNU6-1285P-201ENST00000363480 105 ntBASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 RNU6-799P-201ENST00000363567 107 ntBASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 MRPL42P3-201ENST00000401492 326 ntBASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 RNU6-1156P-201ENST00000410365 100 ntBASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 AL358453.1-201ENST00000422522 250 ntBASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 AC078809.1-201ENST00000427601 140 ntBASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 AC022018.1-201ENST00000430685 241 ntBASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 AC108938.1-201ENST00000451204 136 ntBASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 AC012308.1-201ENST00000451232 178 ntBASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 snoU13.23-201ENST00000458863 104 ntBASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 AC091874.1-201ENST00000511402 339 ntBASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 AC004584.2-201ENST00000570407 410 ntBASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 AL159153.1-201ENST00000619688 317 ntBASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CCDC85CA6NKD9 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 RNU6-1010P-201ENST00000362757 107 ntBASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 RNU4-9P-201ENST00000364951 139 ntBASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 Y_RNA.364-201ENST00000365532 101 ntBASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 MIR544A-201ENST00000384855 91 ntBASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 RNU6-700P-201ENST00000391043 107 ntBASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 AL441985.1-201ENST00000457727 251 ntBASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 RN7SL863P-201ENST00000462370 296 ntBASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 RPL7P47-201ENST00000497299 556 ntBASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 AC016632.1-201ENST00000503994 196 ntBASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 AC008885.1-201ENST00000514930 301 ntBASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 RNA5SP367-201ENST00000516557 118 ntBASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 RNU4-77P-201ENST00000516692 156 ntBASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 AC015712.3-201ENST00000559380 164 ntBASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 RPS15AP11-201ENST00000594193 385 ntBASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 AC092447.9-201ENST00000603395 144 ntBASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 RPL23AP88-201ENST00000605759 454 ntBASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 AC025754.2-201ENST00000606491 432 ntBASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 AC006157.1-201ENST00000611750 366 ntBASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 AL138825.1-201ENST00000618587 192 ntBASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 AL606534.2-204ENST00000635008 178 ntBASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.82□□□□□ -1.8
CCDC85CA6NKD9 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC85CA6NKD9 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CCDC85CA6NKD9 Y_RNA.40-201ENST00000362645 93 ntBASIC3.81□□□□□ -1.8
CCDC85CA6NKD9 Y_RNA.118-201ENST00000363300 101 ntBASIC3.81□□□□□ -1.8
CCDC85CA6NKD9 SNORD115-32-201ENST00000364079 82 ntBASIC3.81□□□□□ -1.8
CCDC85CA6NKD9 RNU6-968P-201ENST00000384076 107 ntBASIC3.81□□□□□ -1.8
CCDC85CA6NKD9 AL079342.1-201ENST00000401460 267 ntBASIC3.81□□□□□ -1.8
CCDC85CA6NKD9 RNU2-23P-201ENST00000410545 195 ntBASIC3.81□□□□□ -1.8
CCDC85CA6NKD9 snoU13.14-201ENST00000459372 104 ntBASIC3.81□□□□□ -1.8
CCDC85CA6NKD9 snoU13.15-201ENST00000459407 104 ntBASIC3.81□□□□□ -1.8
CCDC85CA6NKD9 RPS27P26-201ENST00000494583 239 ntBASIC3.81□□□□□ -1.8
CCDC85CA6NKD9 AC109329.1-201ENST00000518744 317 ntBASIC3.81□□□□□ -1.8
CCDC85CA6NKD9 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC85CA6NKD9 DNAJC8P1-201ENST00000554535 372 ntBASIC3.81□□□□□ -1.8
CCDC85CA6NKD9 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.81□□□□□ -1.8
CCDC85CA6NKD9 MIR4680-201ENST00000580906 66 ntBASIC3.81□□□□□ -1.8
CCDC85CA6NKD9 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.81□□□□□ -1.8
CCDC85CA6NKD9 AL355877.2-201ENST00000603670 358 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms