Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 Y_RNA.5-201ENST00000362334 102 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 Y_RNA.31-201ENST00000362574 102 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 SNORD21-201ENST00000383953 95 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 SNORA29-201ENST00000384183 140 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 SNORA36A-201ENST00000384221 132 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 RNU1-57P-201ENST00000384491 166 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 MIR186-201ENST00000384988 86 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 AL590135.1-201ENST00000422215 156 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 AL358453.1-201ENST00000422522 250 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 AC019205.3-201ENST00000424573 156 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 MTCO3P29-201ENST00000432119 779 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 AC016700.2-201ENST00000446011 156 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 AL035666.1-201ENST00000446195 348 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 AC006445.1-201ENST00000491925 405 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 AC015911.1-201ENST00000495111 156 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 RNA5SP112-201ENST00000515937 99 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 SNORA70.19-201ENST00000516717 90 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 SNORD116.3-201ENST00000517176 78 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 IGHV3-76-201ENST00000522465 295 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 AC079598.5-201ENST00000547460 117 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 SUB1P3-201ENST00000564581 315 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 MIR5680-201ENST00000577577 84 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 AC073657.2-201ENST00000605661 303 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 HMGB1P50-201ENST00000605814 607 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 AC092628.2-201ENST00000622492 339 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 AC244205.2-202ENST00000635781 342 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 SNORD98-201ENST00000636377 67 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 MIR7515-201ENST00000637837 67 ntBASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC2.99□□□□□ -1.93
MBD3L4A6NDZ8 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 Y_RNA.40-201ENST00000362645 93 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 Y_RNA.112-201ENST00000363250 102 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 RNA5SP197-201ENST00000363357 119 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 RNU6-529P-201ENST00000363383 104 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 RNA5SP322-201ENST00000363617 119 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 Y_RNA.216-201ENST00000364205 93 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 RNU4-9P-201ENST00000364951 139 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 Y_RNA.314-201ENST00000365114 102 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 Y_RNA.577-201ENST00000384794 101 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 SNORA48.8-201ENST00000391324 134 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 AC007098.1-201ENST00000420122 367 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 AC097463.2-201ENST00000421074 142 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 MTCYBP10-201ENST00000424905 650 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 AC006028.1-201ENST00000438379 402 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 AC099799.1-201ENST00000439809 192 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 RN7SKP210-201ENST00000459176 261 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 RPL23AP67-201ENST00000465341 474 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 AC090525.1-201ENST00000479116 478 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 RPL30P1-201ENST00000488676 339 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 SNORA31.16-201ENST00000516773 139 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 RN7SKP272-201ENST00000516988 232 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 RN7SKP295-201ENST00000517264 153 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 ELOCP31-201ENST00000540463 467 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 AC016256.1-201ENST00000547971 354 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 AC103810.1-201ENST00000579873 453 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 RPL23AP78-201ENST00000599928 470 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 MIR1244-1-201ENST00000612829 85 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 AL159153.1-201ENST00000619688 317 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 MIR1244-3-201ENST00000635744 85 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 MIR1244-2-201ENST00000636449 85 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 MIR1244-4-202ENST00000636813 85 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 AC073073.2-201ENST00000609827 2578 ntBASIC2.98□□□□□ -1.93
MBD3L4A6NDZ8 AP000560.1-201ENST00000624150 1937 ntBASIC2.97□□□□□ -1.93
MBD3L4A6NDZ8 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
MBD3L4A6NDZ8 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.97□□□□□ -1.93
MBD3L4A6NDZ8 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
MBD3L4A6NDZ8 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
MBD3L4A6NDZ8 RNU6-655P-201ENST00000362858 107 ntBASIC2.97□□□□□ -1.93
MBD3L4A6NDZ8 RNU6-486P-201ENST00000363116 107 ntBASIC2.97□□□□□ -1.93
MBD3L4A6NDZ8 Y_RNA.252-201ENST00000364556 101 ntBASIC2.97□□□□□ -1.93
MBD3L4A6NDZ8 RNU4-56P-201ENST00000364700 142 ntBASIC2.97□□□□□ -1.93
MBD3L4A6NDZ8 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.97□□□□□ -1.93
MBD3L4A6NDZ8 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
MBD3L4A6NDZ8 AL512633.1-201ENST00000399931 655 ntBASIC2.97□□□□□ -1.93
MBD3L4A6NDZ8 RNU6-1156P-201ENST00000410365 100 ntBASIC2.97□□□□□ -1.93
MBD3L4A6NDZ8 RNA5SP494-201ENST00000410653 129 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms