Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 NDUFAF4P2-201ENST00000445374 520 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 snoU13.27-201ENST00000459278 104 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 AC104563.1-201ENST00000476147 376 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 AC098869.1-201ENST00000481627 292 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 AC005840.1-201ENST00000498412 377 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 SNORA31.2-201ENST00000516019 134 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 RNA5SP255-201ENST00000516370 107 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 RNU6-64P-201ENST00000517119 105 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 HSPE1P4-201ENST00000550617 308 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 AC060771.1-201ENST00000582031 164 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 ZNF92P2-201ENST00000600543 1059 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 AL391001.1-201ENST00000602747 715 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 AC007363.1-201ENST00000604736 620 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 RNU6-87P-201ENST00000607561 108 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 AL355816.2-201ENST00000610049 647 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 AC016911.1-201ENST00000613297 452 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 AP000676.3-201ENST00000623299 569 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 AL512643.1-201ENST00000635735 524 ntBASIC0.27□□□□□ -2.37
TCRBV3S1A0A5B6 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 RNA5SP347-201ENST00000362445 119 ntBASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 RNU4-12P-201ENST00000365233 139 ntBASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 Y_RNA.363-201ENST00000365529 113 ntBASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 RNU6-650P-201ENST00000365658 111 ntBASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 RNU6-1025P-201ENST00000410629 104 ntBASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 LARP1BP3-201ENST00000437229 869 ntBASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 MTCO3P18-201ENST00000440206 761 ntBASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 AC079776.3-201ENST00000450665 370 ntBASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 AC048334.1-201ENST00000477975 159 ntBASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 MTCO3P7-201ENST00000510008 774 ntBASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 AF131216.2-201ENST00000512316 564 ntBASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 SNORD79.1-201ENST00000516069 84 ntBASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 SNORD60.2-201ENST00000516883 86 ntBASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 SUMO2P18-201ENST00000518873 252 ntBASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 AL353765.1-201ENST00000605514 183 ntBASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 AC106858.1-201ENST00000637497 429 ntBASIC0.26□□□□□ -2.37
TCRBV3S1A0A5B6 SNORA4.2-201ENST00000365313 147 ntBASIC0.25□□□□□ -2.37
TCRBV3S1A0A5B6 RNU6-969P-201ENST00000383900 105 ntBASIC0.25□□□□□ -2.37
TCRBV3S1A0A5B6 RNU6-701P-201ENST00000384059 107 ntBASIC0.25□□□□□ -2.37
TCRBV3S1A0A5B6 RNU6-1122P-201ENST00000384449 107 ntBASIC0.25□□□□□ -2.37
TCRBV3S1A0A5B6 MIR301A-201ENST00000385261 86 ntBASIC0.25□□□□□ -2.37
TCRBV3S1A0A5B6 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.25□□□□□ -2.37
TCRBV3S1A0A5B6 RNU6-1054P-201ENST00000411293 104 ntBASIC0.25□□□□□ -2.37
TCRBV3S1A0A5B6 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.25□□□□□ -2.37
TCRBV3S1A0A5B6 MTCYBP5-201ENST00000423752 1135 ntBASIC0.25□□□□□ -2.37
TCRBV3S1A0A5B6 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.25□□□□□ -2.37
TCRBV3S1A0A5B6 USP9YP14-201ENST00000430663 563 ntBASIC0.25□□□□□ -2.37
TCRBV3S1A0A5B6 AL591704.1-201ENST00000432574 275 ntBASIC0.25□□□□□ -2.37
TCRBV3S1A0A5B6 MTND4P25-201ENST00000441039 533 ntBASIC0.25□□□□□ -2.37
TCRBV3S1A0A5B6 NEFMP1-201ENST00000443423 1006 ntBASIC0.25□□□□□ -2.37
TCRBV3S1A0A5B6 AL358794.1-201ENST00000445689 381 ntBASIC0.25□□□□□ -2.37
TCRBV3S1A0A5B6 AC012308.1-201ENST00000451232 178 ntBASIC0.25□□□□□ -2.37
TCRBV3S1A0A5B6 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC0.25□□□□□ -2.37
TCRBV3S1A0A5B6 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.25□□□□□ -2.37
TCRBV3S1A0A5B6 RNA5SP102-201ENST00000516865 106 ntBASIC0.25□□□□□ -2.37
TCRBV3S1A0A5B6 BNIP3P6-201ENST00000549284 499 ntBASIC0.25□□□□□ -2.37
TCRBV3S1A0A5B6 AC025423.5-201ENST00000550230 219 ntBASIC0.25□□□□□ -2.37
TCRBV3S1A0A5B6 AC018659.1-201ENST00000551083 169 ntBASIC0.25□□□□□ -2.37
TCRBV3S1A0A5B6 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.25□□□□□ -2.37
TCRBV3S1A0A5B6 AL079343.1-201ENST00000572358 1771 ntBASIC0.24□□□□□ -2.37
TCRBV3S1A0A5B6 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.24□□□□□ -2.37
TCRBV3S1A0A5B6 MIR16-2-201ENST00000362117 81 ntBASIC0.24□□□□□ -2.37
TCRBV3S1A0A5B6 RNA5SP259-201ENST00000365541 109 ntBASIC0.24□□□□□ -2.37
TCRBV3S1A0A5B6 Y_RNA.408-201ENST00000383987 102 ntBASIC0.24□□□□□ -2.37
TCRBV3S1A0A5B6 RNU6-72P-201ENST00000384285 79 ntBASIC0.24□□□□□ -2.37
TCRBV3S1A0A5B6 SNORA12.2-201ENST00000391040 156 ntBASIC0.24□□□□□ -2.37
TCRBV3S1A0A5B6 RNU6-817P-201ENST00000391083 104 ntBASIC0.24□□□□□ -2.37
TCRBV3S1A0A5B6 AF228730.1-201ENST00000397972 663 ntBASIC0.24□□□□□ -2.37
TCRBV3S1A0A5B6 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.24□□□□□ -2.37
TCRBV3S1A0A5B6 AL035398.1-201ENST00000430869 322 ntBASIC0.24□□□□□ -2.37
TCRBV3S1A0A5B6 AC003071.1-201ENST00000451219 789 ntBASIC0.24□□□□□ -2.37
TCRBV3S1A0A5B6 snoU109.2-201ENST00000459316 135 ntBASIC0.24□□□□□ -2.37
TCRBV3S1A0A5B6 AC002350.1-201ENST00000490759 375 ntBASIC0.24□□□□□ -2.37
TCRBV3S1A0A5B6 RPS26P48-201ENST00000491713 339 ntBASIC0.24□□□□□ -2.37
TCRBV3S1A0A5B6 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.24□□□□□ -2.37
TCRBV3S1A0A5B6 AC108078.2-201ENST00000510750 236 ntBASIC0.24□□□□□ -2.37
TCRBV3S1A0A5B6 RNU6-1315P-201ENST00000517187 99 ntBASIC0.24□□□□□ -2.37
TCRBV3S1A0A5B6 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.24□□□□□ -2.37
TCRBV3S1A0A5B6 AC091489.2-201ENST00000566263 604 ntBASIC0.24□□□□□ -2.37
TCRBV3S1A0A5B6 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.24□□□□□ -2.37
TCRBV3S1A0A5B6 MTATP6P3-201ENST00000581686 676 ntBASIC0.24□□□□□ -2.37
TCRBV3S1A0A5B6 AC112204.3-201ENST00000623822 332 ntBASIC0.24□□□□□ -2.37
TCRBV3S1A0A5B6 RNU6-1284P-201ENST00000363701 100 ntBASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 RNU6-883P-201ENST00000384597 107 ntBASIC0.23□□□□□ -2.37
TCRBV3S1A0A5B6 FCF1P10-201ENST00000407590 479 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms