Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 AC008834.1-201ENST00000511612 175 ntBASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RNU5F-2P-201ENST00000516066 82 ntBASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AP001893.2-201ENST00000526949 202 ntBASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AL356057.1-201ENST00000533798 831 ntBASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC011458.1-201ENST00000604034 617 ntBASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AL022161.1-201ENST00000604390 213 ntBASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AP000654.2-201ENST00000605633 586 ntBASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC130454.1-201ENST00000622948 401 ntBASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.18□□□□□ -2.22
IGHV3-43A0A0B4J1X8 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RNU1-17P-201ENST00000363022 152 ntBASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 SNORD115-7-201ENST00000365306 82 ntBASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RNU6-169P-201ENST00000365336 107 ntBASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RNU6-160P-201ENST00000384591 107 ntBASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RNU6-1222P-201ENST00000384615 107 ntBASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 MIR764-201ENST00000390811 85 ntBASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 SNORA48.1-201ENST00000390879 135 ntBASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RNU6-1245P-201ENST00000411130 106 ntBASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 CYCSP33-201ENST00000414485 327 ntBASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 OR6C66P-201ENST00000414917 930 ntBASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AL591806.2-201ENST00000433122 173 ntBASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 KATNBL1P3-201ENST00000443475 909 ntBASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AL360221.1-201ENST00000445989 335 ntBASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC074344.1-201ENST00000512823 224 ntBASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 FABP5P5-201ENST00000515537 406 ntBASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 Vault.3-201ENST00000516676 95 ntBASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RNU2-46P-201ENST00000517038 113 ntBASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 DNAJC19P9-201ENST00000555084 351 ntBASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 HSBP1P1-201ENST00000555205 166 ntBASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 MIR4285-201ENST00000581001 85 ntBASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 MIR4303-201ENST00000581299 66 ntBASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 Z69720.2-201ENST00000624755 279 ntBASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 U6.114-201ENST00000636407 96 ntBASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 U4.7-201ENST00000638126 106 ntBASIC1.17□□□□□ -2.22
IGHV3-43A0A0B4J1X8 CBX3P1-201ENST00000325243 554 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 MIR126-201ENST00000362291 85 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RNU1-62P-201ENST00000362599 164 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 SNORA62.1-201ENST00000364287 154 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RNU4-42P-201ENST00000364738 142 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RNU6-45P-201ENST00000384471 107 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RNA5SP213-201ENST00000391031 106 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AL357139.1-201ENST00000407792 426 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC073614.1-201ENST00000438690 650 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AL035666.1-201ENST00000446195 348 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 HMGN2P23-201ENST00000456759 269 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 FO393415.2-201ENST00000480085 343 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC005178.1-201ENST00000508392 440 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 MIR449C-201ENST00000516047 92 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 RNVU1-2-201ENST00000516326 135 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 SNORA44.1-201ENST00000517031 108 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC115990.1-201ENST00000526957 301 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 DEFB122-202ENST00000569013 197 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 MIR3198-2-201ENST00000577868 80 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC103987.3-201ENST00000582071 292 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 MIR548AB-201ENST00000584917 84 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC234772.3-201ENST00000602277 528 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC090578.1-201ENST00000604955 591 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC025754.2-201ENST00000606491 432 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AC104073.3-201ENST00000610942 955 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 AL590240.4-201ENST00000616908 390 ntBASIC1.16□□□□□ -2.22
IGHV3-43A0A0B4J1X8 U8.3-201ENST00000363321 132 ntBASIC1.15□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNU6-105P-201ENST00000363909 104 ntBASIC1.15□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNA5SP493-201ENST00000364115 91 ntBASIC1.15□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNY4P34-201ENST00000364779 95 ntBASIC1.15□□□□□ -2.23
IGHV3-43A0A0B4J1X8 Y_RNA.367-201ENST00000365544 101 ntBASIC1.15□□□□□ -2.23
IGHV3-43A0A0B4J1X8 SNORA12-201ENST00000391162 147 ntBASIC1.15□□□□□ -2.23
IGHV3-43A0A0B4J1X8 MIR934-201ENST00000401241 83 ntBASIC1.15□□□□□ -2.23
IGHV3-43A0A0B4J1X8 MTND5P25-201ENST00000430499 799 ntBASIC1.15□□□□□ -2.23
IGHV3-43A0A0B4J1X8 VN1R108P-201ENST00000431580 830 ntBASIC1.15□□□□□ -2.23
IGHV3-43A0A0B4J1X8 ART2BP-201ENST00000453501 499 ntBASIC1.15□□□□□ -2.23
IGHV3-43A0A0B4J1X8 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.15□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC027575.1-201ENST00000481064 460 ntBASIC1.15□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNU6-410P-201ENST00000517006 107 ntBASIC1.15□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNU1-92P-201ENST00000517017 135 ntBASIC1.15□□□□□ -2.23
IGHV3-43A0A0B4J1X8 RNA5SP490-201ENST00000517141 136 ntBASIC1.15□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC090572.1-201ENST00000519251 160 ntBASIC1.15□□□□□ -2.23
IGHV3-43A0A0B4J1X8 TRAV32-201ENST00000553993 340 ntBASIC1.15□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.15□□□□□ -2.23
IGHV3-43A0A0B4J1X8 BNIP3P8-201ENST00000597863 560 ntBASIC1.15□□□□□ -2.23
IGHV3-43A0A0B4J1X8 AL034555.1-201ENST00000604816 211 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 220.8 ms