Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.24□□□□□ -2.21
USH1CQ9Y6N9 MIR4422-201ENST00000581938 83 ntBASIC1.24□□□□□ -2.21
USH1CQ9Y6N9 AL158050.2-201ENST00000605336 568 ntBASIC1.24□□□□□ -2.21
USH1CQ9Y6N9 AL359821.1-201ENST00000605519 182 ntBASIC1.24□□□□□ -2.21
USH1CQ9Y6N9 AP002360.4-201ENST00000606980 481 ntBASIC1.24□□□□□ -2.21
USH1CQ9Y6N9 AL590240.4-201ENST00000616908 390 ntBASIC1.24□□□□□ -2.21
USH1CQ9Y6N9 AL159153.1-201ENST00000619688 317 ntBASIC1.24□□□□□ -2.21
USH1CQ9Y6N9 AC008993.2-201ENST00000631744 806 ntBASIC1.24□□□□□ -2.21
USH1CQ9Y6N9 OR4G3P-201ENST00000633500 913 ntBASIC1.24□□□□□ -2.21
USH1CQ9Y6N9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
USH1CQ9Y6N9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
USH1CQ9Y6N9 AC233981.2-201ENST00000611524 1614 ntBASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 AC073343.1-201ENST00000328239 651 ntBASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 RNY1P10-201ENST00000363268 113 ntBASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 Y_RNA.238-201ENST00000364441 102 ntBASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 RNU6-384P-201ENST00000364900 104 ntBASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 RNU6-809P-201ENST00000384461 107 ntBASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 BTF3L4P1-201ENST00000413813 468 ntBASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 RPS29P28-201ENST00000446439 141 ntBASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 MTND1P12-201ENST00000455231 147 ntBASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 snoU13.9-201ENST00000458927 103 ntBASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 AP000797.1-201ENST00000478870 387 ntBASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 MTND2P33-201ENST00000506452 1031 ntBASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 AC108078.2-201ENST00000510750 236 ntBASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 RNU6-123P-201ENST00000516163 102 ntBASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 AC002400.1-201ENST00000569310 726 ntBASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 MIR3169-201ENST00000578032 83 ntBASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 MIR4781-201ENST00000585250 76 ntBASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 AC022022.2-201ENST00000602989 360 ntBASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 AL139418.1-201ENST00000613613 177 ntBASIC1.23□□□□□ -2.21
USH1CQ9Y6N9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 SNORD56.2-201ENST00000363242 71 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 MIR578-201ENST00000384828 96 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 AL355143.1-201ENST00000407101 841 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 MIR1285-1-201ENST00000408593 84 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 RNU6-321P-201ENST00000410912 106 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 MTCO2P21-201ENST00000419780 677 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 ISCA1P6-201ENST00000427740 390 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 Z82205.1-201ENST00000428456 297 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 MTND1P20-201ENST00000430341 950 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 GDI2P2-201ENST00000445131 608 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 RPL39P29-201ENST00000447779 157 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 AL122001.1-201ENST00000457027 370 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 AC004223.1-201ENST00000479840 271 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 AC132942.1-201ENST00000486753 483 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 AC025465.3-201ENST00000510570 311 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 TRMT112P2-201ENST00000512910 132 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 RNU1-92P-201ENST00000517017 135 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 MIR4295-201ENST00000585286 85 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 AC091135.1-201ENST00000585943 307 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 AP000654.2-201ENST00000605633 586 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 RNU4-5P-201ENST00000607255 135 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 AC012409.4-201ENST00000612923 249 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 AC026585.1-201ENST00000619582 524 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 AL607023.1-201ENST00000620045 248 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 AL049777.1-201ENST00000622740 518 ntBASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
USH1CQ9Y6N9 AC245060.5-201ENST00000610778 3293 ntBASIC1.21□□□□□ -2.21
USH1CQ9Y6N9 ZNF209P-201ENST00000593450 2304 ntBASIC1.21□□□□□ -2.22
USH1CQ9Y6N9 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
USH1CQ9Y6N9 Y_RNA.97-201ENST00000363094 102 ntBASIC1.21□□□□□ -2.22
USH1CQ9Y6N9 SNORD114-6-201ENST00000364393 72 ntBASIC1.21□□□□□ -2.22
USH1CQ9Y6N9 RNU6-157P-201ENST00000383957 107 ntBASIC1.21□□□□□ -2.22
USH1CQ9Y6N9 AC114491.1-201ENST00000416095 246 ntBASIC1.21□□□□□ -2.22
USH1CQ9Y6N9 USP9YP17-201ENST00000444617 696 ntBASIC1.21□□□□□ -2.22
USH1CQ9Y6N9 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.21□□□□□ -2.22
USH1CQ9Y6N9 DUXAP8-207ENST00000456786 622 ntBASIC1.21□□□□□ -2.22
USH1CQ9Y6N9 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.21□□□□□ -2.22
USH1CQ9Y6N9 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.21□□□□□ -2.22
USH1CQ9Y6N9 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.21□□□□□ -2.22
USH1CQ9Y6N9 HSPE1P23-201ENST00000509838 286 ntBASIC1.21□□□□□ -2.22
USH1CQ9Y6N9 RNA5SP337-201ENST00000517007 109 ntBASIC1.21□□□□□ -2.22
USH1CQ9Y6N9 SUB1P4-201ENST00000566062 339 ntBASIC1.21□□□□□ -2.22
USH1CQ9Y6N9 MIR4509-3-201ENST00000578671 94 ntBASIC1.21□□□□□ -2.22
USH1CQ9Y6N9 MIR4509-2-201ENST00000583920 94 ntBASIC1.21□□□□□ -2.22
USH1CQ9Y6N9 AL136363.2-201ENST00000604173 851 ntBASIC1.21□□□□□ -2.22
USH1CQ9Y6N9 AC123912.5-201ENST00000605470 343 ntBASIC1.21□□□□□ -2.22
USH1CQ9Y6N9 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.21□□□□□ -2.22
USH1CQ9Y6N9 MIR4509-1-201ENST00000618224 94 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms