Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 MIR325-201ENST00000385260 98 ntBASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 RNU6-159P-201ENST00000391080 106 ntBASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 AL357139.1-201ENST00000407792 426 ntBASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 AC010095.1-201ENST00000443543 144 ntBASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 SNORA70.16-201ENST00000516390 95 ntBASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 RNU6-58P-201ENST00000517143 103 ntBASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 AP004607.1-201ENST00000524456 203 ntBASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 LINC00933-203ENST00000559812 219 ntBASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 AL161756.2-201ENST00000604597 246 ntBASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 AC019176.2-201ENST00000611579 315 ntBASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 AC068831.7-201ENST00000616954 363 ntBASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 snoU18.1-201ENST00000629629 71 ntBASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 MTND1P7-201ENST00000632801 297 ntBASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 AC007390.2-201ENST00000606229 3803 ntBASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
SNX11Q9Y5W9 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 SNORD56.1-201ENST00000362913 68 ntBASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 Y_RNA.217-201ENST00000364214 105 ntBASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 RNA5SP97-201ENST00000365006 84 ntBASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 RNU6-142P-201ENST00000384019 107 ntBASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 RNU6-211P-201ENST00000384047 107 ntBASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 SNORA5A-201ENST00000384111 134 ntBASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 Y_RNA.488-201ENST00000384403 102 ntBASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 RNU6-658P-201ENST00000384606 106 ntBASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 AL357075.1-201ENST00000404107 726 ntBASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 MIR1290-201ENST00000408735 78 ntBASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 AC138623.1-201ENST00000418060 216 ntBASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 snoU13.24-201ENST00000458998 104 ntBASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 Y_RNA.641-201ENST00000459414 105 ntBASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 AC006517.1-201ENST00000480485 328 ntBASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 RNA5SP272-201ENST00000516095 111 ntBASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 RNU6-1183P-201ENST00000517054 60 ntBASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 TRAV28-201ENST00000557548 323 ntBASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 AC055872.1-201ENST00000570978 278 ntBASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 MIR3145-201ENST00000580727 82 ntBASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 AL357075.2-201ENST00000614906 189 ntBASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 AL391261.4-201ENST00000616012 481 ntBASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 SNORA43.4-201ENST00000629559 138 ntBASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.91□□□□□ -1.78
SNX11Q9Y5W9 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.78
SNX11Q9Y5W9 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.9□□□□□ -1.78
SNX11Q9Y5W9 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.9□□□□□ -1.78
SNX11Q9Y5W9 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SNX11Q9Y5W9 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
SNX11Q9Y5W9 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.9□□□□□ -1.78
SNX11Q9Y5W9 RNU6-942P-201ENST00000363002 107 ntBASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 RNU5B-2P-201ENST00000363036 113 ntBASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 SNORD32A-201ENST00000364805 84 ntBASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 RNU6-449P-201ENST00000383914 107 ntBASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 SNORD116-20-201ENST00000384529 92 ntBASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 Y_RNA.568-201ENST00000384742 113 ntBASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 Y_RNA.580-201ENST00000391004 95 ntBASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 SNORA3.3-201ENST00000408712 125 ntBASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 AL590383.1-201ENST00000428602 75 ntBASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 AL162725.1-201ENST00000435405 301 ntBASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 RNU6-966P-201ENST00000516479 104 ntBASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 YPEL5P3-201ENST00000547227 352 ntBASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 AC087499.8-201ENST00000578406 226 ntBASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 SNRPGP15-201ENST00000600149 222 ntBASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 AC024581.2-201ENST00000619986 252 ntBASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 MARK2P15-201ENST00000432204 2186 ntBASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.9□□□□□ -1.79
SNX11Q9Y5W9 AC100821.1-201ENST00000523153 2479 ntBASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 AC018555.1-201ENST00000567548 1980 ntBASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 RNU6-653P-201ENST00000363074 106 ntBASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 RNA5SP399-201ENST00000364003 117 ntBASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 RNU6-335P-201ENST00000364563 113 ntBASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 RNU6-818P-201ENST00000364837 108 ntBASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 SNORA72.2-201ENST00000365028 127 ntBASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 Y_RNA.400-201ENST00000383963 111 ntBASIC3.89□□□□□ -1.79
SNX11Q9Y5W9 SNORA36A-201ENST00000384221 132 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms