Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 AC021269.2-201ENST00000532318 330 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 CYCSP26-201ENST00000534107 320 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 AC245505.1-201ENST00000556398 224 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 MIR5092-201ENST00000583139 88 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 AC073410.2-201ENST00000603240 332 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 AL161423.1-201ENST00000613700 262 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 AC015540.1-201ENST00000615828 501 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 AC009233.1-201ENST00000616477 371 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 AL359880.1-201ENST00000621879 266 ntBASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PCDHGA1Q9Y5H4 ZNF72P-201ENST00000425869 1908 ntBASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 RNU6-1303P-201ENST00000364841 107 ntBASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 Y_RNA.480-201ENST00000384364 102 ntBASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 SNORD116-4-201ENST00000384733 96 ntBASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 AL589823.1-201ENST00000429577 183 ntBASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 HMGN2P3-201ENST00000433603 273 ntBASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 HMGN2P5-201ENST00000436882 273 ntBASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 MRPL50P4-201ENST00000446432 475 ntBASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 AC140059.1-201ENST00000489238 361 ntBASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 AL121917.1-203ENST00000605534 577 ntBASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 HULC.1-201ENST00000612720 240 ntBASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 uc_338.15-201ENST00000615470 191 ntBASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 Z69720.2-201ENST00000624755 279 ntBASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 MIR1291-201ENST00000627649 87 ntBASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 RBBP8P1-201ENST00000449447 1844 ntBASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PCDHGA1Q9Y5H4 RNU6-1085P-201ENST00000363576 107 ntBASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 DEFA7P-201ENST00000382676 285 ntBASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 SNORD116-20-201ENST00000384529 92 ntBASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 SNORD23.1-201ENST00000408212 104 ntBASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 MIR1289-2-201ENST00000408360 111 ntBASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 RPL7P54-201ENST00000438336 674 ntBASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 IPO7P1-201ENST00000442031 636 ntBASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 RNU6-261P-201ENST00000459506 102 ntBASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 AC009646.1-201ENST00000510455 318 ntBASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 AC107222.1-201ENST00000510899 637 ntBASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 RNA5SP281-201ENST00000516504 135 ntBASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 SNORA48.11-201ENST00000517015 89 ntBASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 SNORA31.23-201ENST00000517219 133 ntBASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 HSPE1P18-201ENST00000517602 280 ntBASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 AC026464.5-201ENST00000562497 722 ntBASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 MIR3126-201ENST00000577443 74 ntBASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 MIR3941-201ENST00000582572 103 ntBASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 MIR4424-201ENST00000585257 86 ntBASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 AC093788.1-201ENST00000609356 927 ntBASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 AC007792.1-201ENST00000623023 402 ntBASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 AC241585.2-209ENST00000638217 143 ntBASIC2.34□□□□□ -2.03
PCDHGA1Q9Y5H4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.04
PCDHGA1Q9Y5H4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
PCDHGA1Q9Y5H4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU1-91P-201ENST00000364746 163 ntBASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 SNORA69-201ENST00000383895 132 ntBASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 SNORA6-201ENST00000384033 151 ntBASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 OR9R1P-201ENST00000412200 877 ntBASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 AC074117.2-201ENST00000417130 397 ntBASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 HMGB1P31-201ENST00000437242 427 ntBASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 AP001025.1-201ENST00000486139 332 ntBASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 AC019235.1-201ENST00000503847 207 ntBASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 MTCYBP40-201ENST00000509390 1135 ntBASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 SNORA25.11-201ENST00000515935 105 ntBASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 RNU6-991P-201ENST00000516168 107 ntBASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 Y_RNA.693-201ENST00000516641 110 ntBASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 SNORA25.17-201ENST00000517184 124 ntBASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 MTND4P7-201ENST00000523876 130 ntBASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 SNRPGP18-201ENST00000553000 214 ntBASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 AC121758.2-201ENST00000553271 193 ntBASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 RPS3AP23-202ENST00000574601 686 ntBASIC2.33□□□□□ -2.04
PCDHGA1Q9Y5H4 MIR5583-1-201ENST00000580941 59 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms