Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 AC103810.1-201ENST00000579873 453 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 AC073410.2-201ENST00000603240 332 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 AC113139.1-201ENST00000605049 239 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 AC016727.1-205ENST00000605437 569 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 MIR3976-201ENST00000606807 139 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 AC004832.5-201ENST00000608677 401 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 AC135507.2-201ENST00000612443 309 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.6□□□□□ -1.99
LSM4Q9Y4Z0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
LSM4Q9Y4Z0 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
LSM4Q9Y4Z0 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.59□□□□□ -1.99
LSM4Q9Y4Z0 RNU1-70P-201ENST00000362618 164 ntBASIC2.59□□□□□ -1.99
LSM4Q9Y4Z0 MIR186-201ENST00000384988 86 ntBASIC2.59□□□□□ -1.99
LSM4Q9Y4Z0 U6atac.2-201ENST00000408644 118 ntBASIC2.59□□□□□ -1.99
LSM4Q9Y4Z0 RN7SKP61-201ENST00000410642 295 ntBASIC2.59□□□□□ -1.99
LSM4Q9Y4Z0 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.59□□□□□ -1.99
LSM4Q9Y4Z0 AC245054.2-201ENST00000415639 319 ntBASIC2.59□□□□□ -1.99
LSM4Q9Y4Z0 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.59□□□□□ -1.99
LSM4Q9Y4Z0 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.59□□□□□ -1.99
LSM4Q9Y4Z0 FTH1P25-201ENST00000447665 469 ntBASIC2.59□□□□□ -1.99
LSM4Q9Y4Z0 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.59□□□□□ -1.99
LSM4Q9Y4Z0 AC008571.1-201ENST00000467232 300 ntBASIC2.59□□□□□ -1.99
LSM4Q9Y4Z0 FCF1P8-201ENST00000510322 597 ntBASIC2.59□□□□□ -1.99
LSM4Q9Y4Z0 MTND3P22-201ENST00000510932 243 ntBASIC2.59□□□□□ -1.99
LSM4Q9Y4Z0 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.59□□□□□ -1.99
LSM4Q9Y4Z0 ACA59.1-201ENST00000515966 143 ntBASIC2.59□□□□□ -1.99
LSM4Q9Y4Z0 RNU6-1016P-201ENST00000516689 94 ntBASIC2.59□□□□□ -1.99
LSM4Q9Y4Z0 RAB11AP2-201ENST00000545905 639 ntBASIC2.59□□□□□ -1.99
LSM4Q9Y4Z0 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.59□□□□□ -1.99
LSM4Q9Y4Z0 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.59□□□□□ -1.99
LSM4Q9Y4Z0 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.59□□□□□ -1.99
LSM4Q9Y4Z0 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.59□□□□□ -1.99
LSM4Q9Y4Z0 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.59□□□□□ -2
LSM4Q9Y4Z0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
LSM4Q9Y4Z0 AC026241.1-201ENST00000517873 2142 ntBASIC2.59□□□□□ -2
LSM4Q9Y4Z0 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
LSM4Q9Y4Z0 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.58□□□□□ -2
LSM4Q9Y4Z0 AC093831.2-201ENST00000624393 3427 ntBASIC2.58□□□□□ -2
LSM4Q9Y4Z0 AC080128.1-201ENST00000474389 1917 ntBASIC2.58□□□□□ -2
LSM4Q9Y4Z0 AP000560.1-201ENST00000624150 1937 ntBASIC2.58□□□□□ -2
LSM4Q9Y4Z0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.58□□□□□ -2
LSM4Q9Y4Z0 FAM35CP-201ENST00000554755 2470 ntBASIC2.58□□□□□ -2
LSM4Q9Y4Z0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
LSM4Q9Y4Z0 Y_RNA.387-201ENST00000383918 102 ntBASIC2.58□□□□□ -2
LSM4Q9Y4Z0 RNU6-601P-201ENST00000384540 107 ntBASIC2.58□□□□□ -2
LSM4Q9Y4Z0 RNU6-306P-201ENST00000384617 107 ntBASIC2.58□□□□□ -2
LSM4Q9Y4Z0 EIF4EP4-201ENST00000424916 578 ntBASIC2.58□□□□□ -2
LSM4Q9Y4Z0 SAR1AP4-201ENST00000429225 591 ntBASIC2.58□□□□□ -2
LSM4Q9Y4Z0 USP9YP30-201ENST00000430729 455 ntBASIC2.58□□□□□ -2
LSM4Q9Y4Z0 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.58□□□□□ -2
LSM4Q9Y4Z0 Z96811.1-201ENST00000445880 108 ntBASIC2.58□□□□□ -2
LSM4Q9Y4Z0 RN7SL75P-201ENST00000461926 281 ntBASIC2.58□□□□□ -2
LSM4Q9Y4Z0 MTND4P17-201ENST00000470444 350 ntBASIC2.58□□□□□ -2
LSM4Q9Y4Z0 RPS26P21-201ENST00000475397 348 ntBASIC2.58□□□□□ -2
LSM4Q9Y4Z0 RPL30P1-201ENST00000488676 339 ntBASIC2.58□□□□□ -2
LSM4Q9Y4Z0 AC026782.1-201ENST00000512952 449 ntBASIC2.58□□□□□ -2
LSM4Q9Y4Z0 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.58□□□□□ -2
LSM4Q9Y4Z0 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.58□□□□□ -2
LSM4Q9Y4Z0 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.58□□□□□ -2
LSM4Q9Y4Z0 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.58□□□□□ -2
LSM4Q9Y4Z0 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.58□□□□□ -2
LSM4Q9Y4Z0 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.58□□□□□ -2
LSM4Q9Y4Z0 MIR5680-201ENST00000577577 84 ntBASIC2.58□□□□□ -2
LSM4Q9Y4Z0 MIR4325-201ENST00000583049 90 ntBASIC2.58□□□□□ -2
LSM4Q9Y4Z0 AL117336.2-201ENST00000602435 335 ntBASIC2.58□□□□□ -2
LSM4Q9Y4Z0 AC018462.2-201ENST00000605375 395 ntBASIC2.58□□□□□ -2
LSM4Q9Y4Z0 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.58□□□□□ -2
LSM4Q9Y4Z0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
LSM4Q9Y4Z0 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.58□□□□□ -2
LSM4Q9Y4Z0 AC009541.1-201ENST00000438279 2662 ntBASIC2.57□□□□□ -2
LSM4Q9Y4Z0 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LSM4Q9Y4Z0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
LSM4Q9Y4Z0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
LSM4Q9Y4Z0 Y_RNA.40-201ENST00000362645 93 ntBASIC2.57□□□□□ -2
LSM4Q9Y4Z0 RNU6-461P-201ENST00000364195 107 ntBASIC2.57□□□□□ -2
LSM4Q9Y4Z0 Y_RNA.384-201ENST00000383909 102 ntBASIC2.57□□□□□ -2
LSM4Q9Y4Z0 RNU6-784P-201ENST00000384330 106 ntBASIC2.57□□□□□ -2
LSM4Q9Y4Z0 SNORA46-201ENST00000384762 135 ntBASIC2.57□□□□□ -2
LSM4Q9Y4Z0 MIR627-201ENST00000384979 97 ntBASIC2.57□□□□□ -2
LSM4Q9Y4Z0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.57□□□□□ -2
LSM4Q9Y4Z0 RNU6-1050P-201ENST00000410388 107 ntBASIC2.57□□□□□ -2
LSM4Q9Y4Z0 RNU4-14P-201ENST00000410858 122 ntBASIC2.57□□□□□ -2
LSM4Q9Y4Z0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
LSM4Q9Y4Z0 AIMP1P2-201ENST00000425294 312 ntBASIC2.57□□□□□ -2
LSM4Q9Y4Z0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC2.57□□□□□ -2
LSM4Q9Y4Z0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.57□□□□□ -2
LSM4Q9Y4Z0 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.57□□□□□ -2
LSM4Q9Y4Z0 AC244670.1-201ENST00000436879 112 ntBASIC2.57□□□□□ -2
LSM4Q9Y4Z0 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.57□□□□□ -2
LSM4Q9Y4Z0 RPS12P18-201ENST00000442381 270 ntBASIC2.57□□□□□ -2
LSM4Q9Y4Z0 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.57□□□□□ -2
LSM4Q9Y4Z0 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.57□□□□□ -2
LSM4Q9Y4Z0 AC080013.2-201ENST00000460866 323 ntBASIC2.57□□□□□ -2
LSM4Q9Y4Z0 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.57□□□□□ -2
LSM4Q9Y4Z0 AC092185.1-201ENST00000491371 97 ntBASIC2.57□□□□□ -2
LSM4Q9Y4Z0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms