Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 RNU6-873P-201ENST00000363833 107 ntBASIC4.5□□□□□ -1.69
HCN4Q9Y3Q4 RNU6-884P-201ENST00000363889 107 ntBASIC4.5□□□□□ -1.69
HCN4Q9Y3Q4 Y_RNA.272-201ENST00000364696 102 ntBASIC4.5□□□□□ -1.69
HCN4Q9Y3Q4 RNU6-211P-201ENST00000384047 107 ntBASIC4.5□□□□□ -1.69
HCN4Q9Y3Q4 SNORA36A-201ENST00000384221 132 ntBASIC4.5□□□□□ -1.69
HCN4Q9Y3Q4 SNORA40.19-201ENST00000390846 128 ntBASIC4.5□□□□□ -1.69
HCN4Q9Y3Q4 U3.26-201ENST00000391236 204 ntBASIC4.5□□□□□ -1.69
HCN4Q9Y3Q4 SNORA57.3-201ENST00000411095 141 ntBASIC4.5□□□□□ -1.69
HCN4Q9Y3Q4 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.5□□□□□ -1.69
HCN4Q9Y3Q4 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.5□□□□□ -1.69
HCN4Q9Y3Q4 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HCN4Q9Y3Q4 AC244670.1-201ENST00000436879 112 ntBASIC4.5□□□□□ -1.69
HCN4Q9Y3Q4 AP000705.1-201ENST00000454567 350 ntBASIC4.5□□□□□ -1.69
HCN4Q9Y3Q4 SNRPGP7-201ENST00000469016 106 ntBASIC4.5□□□□□ -1.69
HCN4Q9Y3Q4 AL133393.1-201ENST00000603277 287 ntBASIC4.5□□□□□ -1.69
HCN4Q9Y3Q4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.5□□□□□ -1.69
HCN4Q9Y3Q4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.5□□□□□ -1.69
HCN4Q9Y3Q4 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HCN4Q9Y3Q4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
HCN4Q9Y3Q4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HCN4Q9Y3Q4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HCN4Q9Y3Q4 RNU4-56P-201ENST00000364700 142 ntBASIC4.49□□□□□ -1.69
HCN4Q9Y3Q4 AL357139.1-201ENST00000407792 426 ntBASIC4.49□□□□□ -1.69
HCN4Q9Y3Q4 AC012306.1-201ENST00000423267 114 ntBASIC4.49□□□□□ -1.69
HCN4Q9Y3Q4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.49□□□□□ -1.69
HCN4Q9Y3Q4 AC007215.1-201ENST00000464893 276 ntBASIC4.49□□□□□ -1.69
HCN4Q9Y3Q4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.49□□□□□ -1.69
HCN4Q9Y3Q4 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.49□□□□□ -1.69
HCN4Q9Y3Q4 RNA5SP497-201ENST00000516081 97 ntBASIC4.49□□□□□ -1.69
HCN4Q9Y3Q4 TRAV8-5-201ENST00000537369 341 ntBASIC4.49□□□□□ -1.69
HCN4Q9Y3Q4 NACAP3-201ENST00000552100 481 ntBASIC4.49□□□□□ -1.69
HCN4Q9Y3Q4 AC009163.5-201ENST00000575421 637 ntBASIC4.49□□□□□ -1.69
HCN4Q9Y3Q4 AL451007.1-201ENST00000595491 289 ntBASIC4.49□□□□□ -1.69
HCN4Q9Y3Q4 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HCN4Q9Y3Q4 AC092435.4-201ENST00000623012 4159 ntBASIC4.49□□□□□ -1.69
HCN4Q9Y3Q4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HCN4Q9Y3Q4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HCN4Q9Y3Q4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HCN4Q9Y3Q4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HCN4Q9Y3Q4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HCN4Q9Y3Q4 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HCN4Q9Y3Q4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.49□□□□□ -1.69
HCN4Q9Y3Q4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HCN4Q9Y3Q4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 MAPK10-303ENST00000641324 3959 ntBASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 USP8P1-201ENST00000494673 3183 ntBASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 CEP170P1-201ENST00000502249 4587 ntBASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 RNU6-1285P-201ENST00000363480 105 ntBASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 SNORA72.2-201ENST00000365028 127 ntBASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 RNU6-1280P-201ENST00000365211 107 ntBASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 MIR183-201ENST00000384958 110 ntBASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 RNA5SP390-201ENST00000410191 113 ntBASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 RNU2-51P-201ENST00000410708 197 ntBASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 RNU5E-9P-201ENST00000411164 104 ntBASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 AC138623.1-201ENST00000418060 216 ntBASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 HMGN2P31-201ENST00000432430 273 ntBASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 IGKV2D-19-201ENST00000523346 262 ntBASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 AC018448.1-201ENST00000552843 316 ntBASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 MTND6P33-201ENST00000571794 183 ntBASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 AL359198.2-201ENST00000611836 194 ntBASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 MIR3529-201ENST00000637713 78 ntBASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 AC068254.2-201ENST00000623938 3577 ntBASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 MTND5P35-201ENST00000557537 1720 ntBASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC4.48□□□□□ -1.69
HCN4Q9Y3Q4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 AC027290.2-201ENST00000623210 18662 ntBASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 MIR331-201ENST00000362302 94 ntBASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 Y_RNA.101-201ENST00000363154 102 ntBASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 Y_RNA.179-201ENST00000363844 90 ntBASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 RNU6-312P-201ENST00000364629 107 ntBASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 RNU6-1310P-201ENST00000384153 107 ntBASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 RNU6-22P-201ENST00000384355 107 ntBASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 RNU6-959P-201ENST00000384671 107 ntBASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 Y_RNA.571-201ENST00000384753 98 ntBASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 snoU13.6-201ENST00000458785 104 ntBASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 RNU6-625P-201ENST00000459412 107 ntBASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 RNU6-479P-201ENST00000516348 105 ntBASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 RNU6-966P-201ENST00000516479 104 ntBASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 RNU6-62P-201ENST00000516526 102 ntBASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 AC068831.7-201ENST00000616954 363 ntBASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 346.2 ms