Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.35□□□□□ -2.19
RHBDD3Q9Y3P4 RNA5SP445-201ENST00000515889 115 ntBASIC1.35□□□□□ -2.19
RHBDD3Q9Y3P4 RNU1-86P-201ENST00000516108 154 ntBASIC1.35□□□□□ -2.19
RHBDD3Q9Y3P4 RNU1-107P-201ENST00000516617 154 ntBASIC1.35□□□□□ -2.19
RHBDD3Q9Y3P4 MTND2P7-201ENST00000521337 640 ntBASIC1.35□□□□□ -2.19
RHBDD3Q9Y3P4 AL356057.1-201ENST00000533798 831 ntBASIC1.35□□□□□ -2.19
RHBDD3Q9Y3P4 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.35□□□□□ -2.19
RHBDD3Q9Y3P4 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.35□□□□□ -2.19
RHBDD3Q9Y3P4 AC002400.1-201ENST00000569310 726 ntBASIC1.35□□□□□ -2.19
RHBDD3Q9Y3P4 AC018714.1-201ENST00000605028 208 ntBASIC1.35□□□□□ -2.19
RHBDD3Q9Y3P4 PRR13P7-201ENST00000605538 430 ntBASIC1.35□□□□□ -2.19
RHBDD3Q9Y3P4 AL590240.4-201ENST00000616908 390 ntBASIC1.35□□□□□ -2.19
RHBDD3Q9Y3P4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
RHBDD3Q9Y3P4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
RHBDD3Q9Y3P4 AP000560.1-201ENST00000624150 1937 ntBASIC1.34□□□□□ -2.19
RHBDD3Q9Y3P4 ZNF29P-201ENST00000225587 168 ntBASIC1.34□□□□□ -2.19
RHBDD3Q9Y3P4 RNU6-527P-201ENST00000363425 104 ntBASIC1.34□□□□□ -2.19
RHBDD3Q9Y3P4 RNU6-501P-201ENST00000364072 100 ntBASIC1.34□□□□□ -2.19
RHBDD3Q9Y3P4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
RHBDD3Q9Y3P4 RNU6-641P-201ENST00000384006 107 ntBASIC1.34□□□□□ -2.19
RHBDD3Q9Y3P4 RNU2-8P-201ENST00000410727 190 ntBASIC1.34□□□□□ -2.19
RHBDD3Q9Y3P4 ELOCP4-201ENST00000420090 333 ntBASIC1.34□□□□□ -2.19
RHBDD3Q9Y3P4 MTCYBP39-201ENST00000437562 491 ntBASIC1.34□□□□□ -2.19
RHBDD3Q9Y3P4 FTH1P25-201ENST00000447665 469 ntBASIC1.34□□□□□ -2.19
RHBDD3Q9Y3P4 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.34□□□□□ -2.19
RHBDD3Q9Y3P4 AMD1P1-201ENST00000457220 922 ntBASIC1.34□□□□□ -2.19
RHBDD3Q9Y3P4 HMGN1P13-201ENST00000505795 138 ntBASIC1.34□□□□□ -2.19
RHBDD3Q9Y3P4 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.34□□□□□ -2.19
RHBDD3Q9Y3P4 RNU6-902P-201ENST00000517212 91 ntBASIC1.34□□□□□ -2.19
RHBDD3Q9Y3P4 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.34□□□□□ -2.19
RHBDD3Q9Y3P4 AL354943.1-201ENST00000572103 781 ntBASIC1.34□□□□□ -2.19
RHBDD3Q9Y3P4 MIR3683-201ENST00000580847 82 ntBASIC1.34□□□□□ -2.19
RHBDD3Q9Y3P4 AC008521.1-201ENST00000587471 187 ntBASIC1.34□□□□□ -2.19
RHBDD3Q9Y3P4 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.34□□□□□ -2.19
RHBDD3Q9Y3P4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.34□□□□□ -2.19
RHBDD3Q9Y3P4 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
RHBDD3Q9Y3P4 U4.7-201ENST00000638126 106 ntBASIC1.34□□□□□ -2.19
RHBDD3Q9Y3P4 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 RNU6-1285P-201ENST00000363480 105 ntBASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 RNU6-142P-201ENST00000384019 107 ntBASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 RNU6-439P-201ENST00000384188 106 ntBASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 RNU6-39P-201ENST00000384344 107 ntBASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 MIR544A-201ENST00000384855 91 ntBASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 MTCYBP36-201ENST00000404146 440 ntBASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 MIR1267-201ENST00000408723 78 ntBASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 AC106883.1-201ENST00000418805 562 ntBASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 AL589872.1-201ENST00000426602 288 ntBASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 UBE2V1P8-201ENST00000437166 265 ntBASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 HSPE1P24-201ENST00000450782 238 ntBASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 AC005908.1-201ENST00000468701 347 ntBASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 AC091951.3-201ENST00000504093 246 ntBASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 MTATP6P9-201ENST00000515039 680 ntBASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 RNU6-685P-201ENST00000517088 95 ntBASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 AP003034.1-201ENST00000534621 422 ntBASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 AC027807.1-201ENST00000559921 996 ntBASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 AL034555.1-201ENST00000604816 211 ntBASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 AC006927.3-201ENST00000638789 384 ntBASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 MTND5P9-201ENST00000503854 1755 ntBASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
RHBDD3Q9Y3P4 SNORD33-201ENST00000362761 85 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 RNU6-112P-201ENST00000363599 104 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 Y_RNA.255-201ENST00000364581 97 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 RNA5SP190-201ENST00000365222 118 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 RNU6-61P-201ENST00000365528 109 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 RNU6-26P-201ENST00000383985 107 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 SNORD26-201ENST00000384147 75 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 AC068050.1-201ENST00000394891 380 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 MIR1304-201ENST00000408243 91 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 RNU6-955P-201ENST00000410497 104 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 RNU6-607P-201ENST00000411283 108 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 C1DP2-201ENST00000418167 426 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 EBAG9P1-201ENST00000418955 543 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 AC123900.1-201ENST00000420390 96 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 MTCO3P46-201ENST00000425787 232 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 AL121890.1-201ENST00000435457 205 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 CR769776.1-201ENST00000441254 787 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 MTND2P4-201ENST00000445034 1004 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 HMGN2P18-201ENST00000450680 270 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 AC130509.1-201ENST00000464158 433 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 AC099513.1-201ENST00000490423 301 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 AC034244.1-201ENST00000507687 207 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 MTND3P5-201ENST00000512798 333 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 SNORD60.2-201ENST00000516883 86 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 AP002453.2-201ENST00000533503 320 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 BX248123.2-201ENST00000606318 124 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 AC025754.2-201ENST00000606491 432 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 AC138749.5-201ENST00000611461 208 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 AC116165.2-201ENST00000616705 206 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 AC091304.6-201ENST00000619761 202 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 AC131159.1-201ENST00000621854 213 ntBASIC1.32□□□□□ -2.2
RHBDD3Q9Y3P4 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms