Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.95□□□□□ -1.62
LHX6Q9UPM6 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.95□□□□□ -1.62
LHX6Q9UPM6 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LHX6Q9UPM6 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LHX6Q9UPM6 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
LHX6Q9UPM6 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
LHX6Q9UPM6 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.94□□□□□ -1.62
LHX6Q9UPM6 RNA5SP326-201ENST00000363209 110 ntBASIC4.94□□□□□ -1.62
LHX6Q9UPM6 RNU6-529P-201ENST00000363383 104 ntBASIC4.94□□□□□ -1.62
LHX6Q9UPM6 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.94□□□□□ -1.62
LHX6Q9UPM6 RNF10P1-201ENST00000418589 369 ntBASIC4.94□□□□□ -1.62
LHX6Q9UPM6 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.94□□□□□ -1.62
LHX6Q9UPM6 AC245102.2-201ENST00000448956 180 ntBASIC4.94□□□□□ -1.62
LHX6Q9UPM6 AC107934.2-201ENST00000518653 310 ntBASIC4.94□□□□□ -1.62
LHX6Q9UPM6 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.94□□□□□ -1.62
LHX6Q9UPM6 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.94□□□□□ -1.62
LHX6Q9UPM6 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
LHX6Q9UPM6 AL162726.3-218ENST00000636401 95 ntBASIC4.94□□□□□ -1.62
LHX6Q9UPM6 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.94□□□□□ -1.62
LHX6Q9UPM6 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
LHX6Q9UPM6 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LHX6Q9UPM6 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
LHX6Q9UPM6 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
LHX6Q9UPM6 AL022322.2-201ENST00000624072 20397 ntBASIC4.94□□□□□ -1.62
LHX6Q9UPM6 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.93□□□□□ -1.62
LHX6Q9UPM6 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LHX6Q9UPM6 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
LHX6Q9UPM6 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.93□□□□□ -1.62
LHX6Q9UPM6 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LHX6Q9UPM6 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LHX6Q9UPM6 Y_RNA.40-201ENST00000362645 93 ntBASIC4.93□□□□□ -1.62
LHX6Q9UPM6 RNU6-1209P-201ENST00000363655 107 ntBASIC4.93□□□□□ -1.62
LHX6Q9UPM6 SNORA51.4-201ENST00000364993 124 ntBASIC4.93□□□□□ -1.62
LHX6Q9UPM6 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LHX6Q9UPM6 Y_RNA.437-201ENST00000384113 113 ntBASIC4.93□□□□□ -1.62
LHX6Q9UPM6 MIR181A2-201ENST00000384863 110 ntBASIC4.93□□□□□ -1.62
LHX6Q9UPM6 MIR548D2-201ENST00000384955 97 ntBASIC4.93□□□□□ -1.62
LHX6Q9UPM6 MIR195-201ENST00000385194 87 ntBASIC4.93□□□□□ -1.62
LHX6Q9UPM6 MT-TI-201ENST00000387365 69 ntBASIC4.93□□□□□ -1.62
LHX6Q9UPM6 MIR298-201ENST00000401212 88 ntBASIC4.93□□□□□ -1.62
LHX6Q9UPM6 AL139095.1-201ENST00000404326 391 ntBASIC4.93□□□□□ -1.62
LHX6Q9UPM6 AL031121.1-201ENST00000406553 254 ntBASIC4.93□□□□□ -1.62
LHX6Q9UPM6 AC063976.3-201ENST00000426849 329 ntBASIC4.93□□□□□ -1.62
LHX6Q9UPM6 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.93□□□□□ -1.62
LHX6Q9UPM6 RNU7-171P-201ENST00000459581 62 ntBASIC4.93□□□□□ -1.62
LHX6Q9UPM6 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.93□□□□□ -1.62
LHX6Q9UPM6 RNA5SP464-201ENST00000516251 108 ntBASIC4.93□□□□□ -1.62
LHX6Q9UPM6 MIR4715-201ENST00000584117 79 ntBASIC4.93□□□□□ -1.62
LHX6Q9UPM6 HSPE1P7-201ENST00000604681 321 ntBASIC4.93□□□□□ -1.62
LHX6Q9UPM6 Six3os1_7.1-201ENST00000621512 201 ntBASIC4.93□□□□□ -1.62
LHX6Q9UPM6 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.93□□□□□ -1.62
LHX6Q9UPM6 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LHX6Q9UPM6 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LHX6Q9UPM6 AC058791.1-201ENST00000608412 3198 ntBASIC4.93□□□□□ -1.62
LHX6Q9UPM6 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.93□□□□□ -1.62
LHX6Q9UPM6 AL356489.2-201ENST00000566968 3528 ntBASIC4.93□□□□□ -1.62
LHX6Q9UPM6 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.93□□□□□ -1.62
LHX6Q9UPM6 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LHX6Q9UPM6 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LHX6Q9UPM6 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LHX6Q9UPM6 A2MP1-204ENST00000566278 4130 ntBASIC4.92□□□□□ -1.62
LHX6Q9UPM6 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.92□□□□□ -1.62
LHX6Q9UPM6 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LHX6Q9UPM6 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LHX6Q9UPM6 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
LHX6Q9UPM6 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LHX6Q9UPM6 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LHX6Q9UPM6 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LHX6Q9UPM6 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.92□□□□□ -1.62
LHX6Q9UPM6 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.92□□□□□ -1.62
LHX6Q9UPM6 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.92□□□□□ -1.62
LHX6Q9UPM6 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LHX6Q9UPM6 MUC2-202ENST00000613187 4845 ntBASIC4.92□□□□□ -1.62
LHX6Q9UPM6 RNU1-136P-201ENST00000384181 164 ntBASIC4.92□□□□□ -1.62
LHX6Q9UPM6 RNA5SP187-201ENST00000384400 119 ntBASIC4.92□□□□□ -1.62
LHX6Q9UPM6 AL451046.2-201ENST00000403074 277 ntBASIC4.92□□□□□ -1.62
LHX6Q9UPM6 Y_RNA.601-201ENST00000410500 113 ntBASIC4.92□□□□□ -1.62
LHX6Q9UPM6 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
LHX6Q9UPM6 RPL39P25-201ENST00000449384 154 ntBASIC4.92□□□□□ -1.62
LHX6Q9UPM6 RPS3P1-201ENST00000456781 192 ntBASIC4.92□□□□□ -1.62
LHX6Q9UPM6 RNA5SP57-201ENST00000459463 123 ntBASIC4.92□□□□□ -1.62
LHX6Q9UPM6 AC080013.2-201ENST00000460866 323 ntBASIC4.92□□□□□ -1.62
LHX6Q9UPM6 HMGN2P9-201ENST00000476875 229 ntBASIC4.92□□□□□ -1.62
LHX6Q9UPM6 AC105137.1-201ENST00000484355 562 ntBASIC4.92□□□□□ -1.62
LHX6Q9UPM6 NIP7P2-201ENST00000485801 544 ntBASIC4.92□□□□□ -1.62
LHX6Q9UPM6 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.92□□□□□ -1.62
LHX6Q9UPM6 MIR6716-201ENST00000613413 80 ntBASIC4.92□□□□□ -1.62
LHX6Q9UPM6 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LHX6Q9UPM6 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
LHX6Q9UPM6 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LHX6Q9UPM6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
LHX6Q9UPM6 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
LHX6Q9UPM6 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
LHX6Q9UPM6 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
LHX6Q9UPM6 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
LHX6Q9UPM6 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.91□□□□□ -1.62
LHX6Q9UPM6 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LHX6Q9UPM6 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
LHX6Q9UPM6 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
LHX6Q9UPM6 AL590240.1-201ENST00000334118 313 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms