Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 AC104073.1-201ENST00000451988 151 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 Y_RNA.687-201ENST00000516558 91 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 RNU7-4P-201ENST00000516961 62 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 RNU6-64P-201ENST00000517119 105 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AF186190.1-201ENST00000517470 480 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AC069113.1-201ENST00000517763 267 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AC034102.8-201ENST00000615146 484 ntBASIC2.39□□□□□ -2.03
NOTCH3Q9UM47 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 Y_RNA.183-201ENST00000363882 113 ntBASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 Y_RNA.292-201ENST00000364904 97 ntBASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 RNU6-1293P-201ENST00000384077 107 ntBASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 RNU6-658P-201ENST00000384606 106 ntBASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 RPL23AP33-201ENST00000442301 452 ntBASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 RPS26P56-201ENST00000444468 240 ntBASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 AL109933.2-201ENST00000452651 260 ntBASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 RPL31P60-201ENST00000478450 367 ntBASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 TRBV12-1-201ENST00000479785 344 ntBASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 ANXA2P1-201ENST00000505539 926 ntBASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 RNU6-346P-201ENST00000516288 111 ntBASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 MIR4273-201ENST00000582824 84 ntBASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 AC174048.1-201ENST00000603389 144 ntBASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 RNU6-156P-201ENST00000621869 107 ntBASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 PWAR6-201ENST00000552334 4618 ntBASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 AL356274.2-201ENST00000624379 3752 ntBASIC2.38□□□□□ -2.03
NOTCH3Q9UM47 AC138393.1-203ENST00000327086 343 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 MIR22-201ENST00000362190 85 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 RNY1-201ENST00000364228 113 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 RNU6-1325P-201ENST00000364905 105 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 Y_RNA.304-201ENST00000365011 112 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 RNU6-1226P-201ENST00000384317 107 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 SNORD15B-201ENST00000384714 146 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 MIR887-201ENST00000401258 79 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 MTCYBP2-201ENST00000407745 171 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 AL030996.1-201ENST00000411430 235 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 AC093106.2-201ENST00000428212 385 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 AL139132.1-201ENST00000431587 344 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 AL591623.2-201ENST00000449978 222 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 MRPL42P6-201ENST00000486397 371 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 AC092470.1-201ENST00000546187 132 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 RPL23AP84-201ENST00000571193 464 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 MIR5696-201ENST00000578474 85 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 MIR7-2-201ENST00000384970 110 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 SNORA53-201ENST00000391141 249 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 RNU6-325P-201ENST00000411132 105 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 FTLP19-201ENST00000433300 394 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 AL603825.1-201ENST00000438481 80 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 PIGFP3-201ENST00000441918 722 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 AC113155.1-201ENST00000511141 769 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 AMZ2P1-203ENST00000565833 850 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 DEFB122-202ENST00000569013 197 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 AC024153.1-201ENST00000603103 365 ntBASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC2.37□□□□□ -2.03
NOTCH3Q9UM47 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 Y_RNA.398-201ENST00000383952 99 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 RPS29P13-201ENST00000402041 169 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 RNA5SP31-201ENST00000411144 127 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 EI24P1-201ENST00000416584 867 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 AL513477.1-202ENST00000417061 214 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 AC108938.1-201ENST00000451204 136 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 COX6CP14-201ENST00000469580 174 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 MRPS18CP4-201ENST00000535821 231 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 AC011602.1-201ENST00000546484 331 ntBASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.36□□□□□ -2.03
NOTCH3Q9UM47 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms