Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 Y_RNA.384-201ENST00000383909 102 ntBASIC2.76□□□□□ -1.97
SIX4Q9UIU6 Y_RNA.419-201ENST00000384041 102 ntBASIC2.76□□□□□ -1.97
SIX4Q9UIU6 RNU6-214P-201ENST00000384130 107 ntBASIC2.76□□□□□ -1.97
SIX4Q9UIU6 RNA5SP210-201ENST00000391034 120 ntBASIC2.76□□□□□ -1.97
SIX4Q9UIU6 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.76□□□□□ -1.97
SIX4Q9UIU6 AC016831.2-201ENST00000417179 352 ntBASIC2.76□□□□□ -1.97
SIX4Q9UIU6 snoU13.28-201ENST00000459235 104 ntBASIC2.76□□□□□ -1.97
SIX4Q9UIU6 AC026801.1-201ENST00000497178 464 ntBASIC2.76□□□□□ -1.97
SIX4Q9UIU6 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SIX4Q9UIU6 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.76□□□□□ -1.97
SIX4Q9UIU6 RNA5SP320-201ENST00000516263 124 ntBASIC2.76□□□□□ -1.97
SIX4Q9UIU6 Y_RNA.687-201ENST00000516558 91 ntBASIC2.76□□□□□ -1.97
SIX4Q9UIU6 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SIX4Q9UIU6 AP000867.2-201ENST00000532468 320 ntBASIC2.76□□□□□ -1.97
SIX4Q9UIU6 AL391261.3-201ENST00000557194 520 ntBASIC2.76□□□□□ -1.97
SIX4Q9UIU6 AL645944.1-201ENST00000603857 493 ntBASIC2.76□□□□□ -1.97
SIX4Q9UIU6 AL355598.1-201ENST00000604169 202 ntBASIC2.76□□□□□ -1.97
SIX4Q9UIU6 MIR6817-201ENST00000615588 66 ntBASIC2.76□□□□□ -1.97
SIX4Q9UIU6 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
SIX4Q9UIU6 Z69720.2-201ENST00000624755 279 ntBASIC2.76□□□□□ -1.97
SIX4Q9UIU6 MTND4LP32-201ENST00000636111 270 ntBASIC2.76□□□□□ -1.97
SIX4Q9UIU6 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SIX4Q9UIU6 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.75□□□□□ -1.97
SIX4Q9UIU6 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SIX4Q9UIU6 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SIX4Q9UIU6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SIX4Q9UIU6 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SIX4Q9UIU6 U8.9-201ENST00000365667 134 ntBASIC2.75□□□□□ -1.97
SIX4Q9UIU6 Y_RNA.394-201ENST00000383942 103 ntBASIC2.75□□□□□ -1.97
SIX4Q9UIU6 SNORD116-29-201ENST00000384516 83 ntBASIC2.75□□□□□ -1.97
SIX4Q9UIU6 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SIX4Q9UIU6 AL445529.1-201ENST00000398713 389 ntBASIC2.75□□□□□ -1.97
SIX4Q9UIU6 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.75□□□□□ -1.97
SIX4Q9UIU6 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.75□□□□□ -1.97
SIX4Q9UIU6 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC2.75□□□□□ -1.97
SIX4Q9UIU6 AC093151.1-201ENST00000427711 313 ntBASIC2.75□□□□□ -1.97
SIX4Q9UIU6 SNAP23P1-201ENST00000433229 246 ntBASIC2.75□□□□□ -1.97
SIX4Q9UIU6 FABP5P14-201ENST00000437273 393 ntBASIC2.75□□□□□ -1.97
SIX4Q9UIU6 MTATP6P7-201ENST00000453315 681 ntBASIC2.75□□□□□ -1.97
SIX4Q9UIU6 RNU7-187P-201ENST00000458985 68 ntBASIC2.75□□□□□ -1.97
SIX4Q9UIU6 SNORD19B-201ENST00000459623 84 ntBASIC2.75□□□□□ -1.97
SIX4Q9UIU6 UBE2DNL-203ENST00000474922 222 ntBASIC2.75□□□□□ -1.97
SIX4Q9UIU6 AC096745.1-201ENST00000509945 370 ntBASIC2.75□□□□□ -1.97
SIX4Q9UIU6 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.75□□□□□ -1.97
SIX4Q9UIU6 RNA5SP148-201ENST00000516527 94 ntBASIC2.75□□□□□ -1.97
SIX4Q9UIU6 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SIX4Q9UIU6 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.75□□□□□ -1.97
SIX4Q9UIU6 AC100830.2-201ENST00000581636 240 ntBASIC2.75□□□□□ -1.97
SIX4Q9UIU6 AL121917.1-203ENST00000605534 577 ntBASIC2.75□□□□□ -1.97
SIX4Q9UIU6 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SIX4Q9UIU6 AL627309.6-201ENST00000606857 840 ntBASIC2.75□□□□□ -1.97
SIX4Q9UIU6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.75□□□□□ -1.97
SIX4Q9UIU6 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
SIX4Q9UIU6 AC138915.1-201ENST00000565427 1685 ntBASIC2.75□□□□□ -1.97
SIX4Q9UIU6 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.75□□□□□ -1.97
SIX4Q9UIU6 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
SIX4Q9UIU6 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.74□□□□□ -1.97
SIX4Q9UIU6 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SIX4Q9UIU6 RNU1-100P-201ENST00000365255 165 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 RNU6-898P-201ENST00000365627 104 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 RNU6-1297P-201ENST00000384415 104 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 RNU6-306P-201ENST00000384617 107 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 MIR518C-201ENST00000384822 101 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 MIR518D-201ENST00000385014 87 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 SNORA26.7-201ENST00000391288 122 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 RNU6-370P-201ENST00000411008 104 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 RPS20P15-201ENST00000412792 311 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 SNORD56-201ENST00000413522 71 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 AL096701.2-201ENST00000416920 238 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 TOMM20P4-201ENST00000427861 435 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 AC236972.1-201ENST00000433225 199 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 AC098831.1-201ENST00000440661 216 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 AL031274.1-201ENST00000450334 232 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 AC010099.1-201ENST00000455434 375 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 RPL23AP45-201ENST00000476406 468 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 HMGN1P13-201ENST00000505795 138 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 RNU6-1153P-201ENST00000516760 105 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.74□□□□□ -1.97
SIX4Q9UIU6 CKS1BP7-201ENST00000522230 235 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
SIX4Q9UIU6 AC007536.1-201ENST00000533382 349 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.74□□□□□ -1.97
SIX4Q9UIU6 APOOP3-201ENST00000536787 586 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 IMMP1LP2-201ENST00000552954 492 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.74□□□□□ -1.97
SIX4Q9UIU6 HMGN2P15-201ENST00000585707 270 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 AC008121.1-201ENST00000603244 268 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 AL133255.1-201ENST00000606374 441 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 AL161629.2-201ENST00000615347 275 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 MIR6128-201ENST00000615528 109 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 AC090574.1-201ENST00000623186 233 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 AC243829.7-201ENST00000633081 225 ntBASIC2.74□□□□□ -1.97
SIX4Q9UIU6 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.74□□□□□ -1.97
SIX4Q9UIU6 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SIX4Q9UIU6 RNU4-76P-201ENST00000364509 141 ntBASIC2.73□□□□□ -1.97
SIX4Q9UIU6 Y_RNA.259-201ENST00000364619 101 ntBASIC2.73□□□□□ -1.97
SIX4Q9UIU6 Y_RNA.460-201ENST00000384255 102 ntBASIC2.73□□□□□ -1.97
SIX4Q9UIU6 RNU6-72P-201ENST00000384285 79 ntBASIC2.73□□□□□ -1.97
SIX4Q9UIU6 Y_RNA.473-201ENST00000384333 102 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms