Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.82□□□□□ -1.8
MBD1Q9UIS9 AL159169.1-201ENST00000421119 127 ntBASIC3.82□□□□□ -1.8
MBD1Q9UIS9 CYCSP32-201ENST00000440548 321 ntBASIC3.82□□□□□ -1.8
MBD1Q9UIS9 RN7SKP18-201ENST00000516005 275 ntBASIC3.82□□□□□ -1.8
MBD1Q9UIS9 ATP5F1P5-201ENST00000526403 760 ntBASIC3.82□□□□□ -1.8
MBD1Q9UIS9 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.82□□□□□ -1.8
MBD1Q9UIS9 MIR4282-201ENST00000583613 67 ntBASIC3.82□□□□□ -1.8
MBD1Q9UIS9 AC010928.2-201ENST00000588017 287 ntBASIC3.82□□□□□ -1.8
MBD1Q9UIS9 AC005000.2-201ENST00000605468 310 ntBASIC3.82□□□□□ -1.8
MBD1Q9UIS9 RNU1-30P-201ENST00000606575 163 ntBASIC3.82□□□□□ -1.8
MBD1Q9UIS9 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
MBD1Q9UIS9 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.82□□□□□ -1.8
MBD1Q9UIS9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MBD1Q9UIS9 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MBD1Q9UIS9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
MBD1Q9UIS9 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MBD1Q9UIS9 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
MBD1Q9UIS9 Y_RNA.8-201ENST00000362353 102 ntBASIC3.81□□□□□ -1.8
MBD1Q9UIS9 Y_RNA.245-201ENST00000364493 95 ntBASIC3.81□□□□□ -1.8
MBD1Q9UIS9 Y_RNA.275-201ENST00000364726 110 ntBASIC3.81□□□□□ -1.8
MBD1Q9UIS9 RNU5E-7P-201ENST00000365290 117 ntBASIC3.81□□□□□ -1.8
MBD1Q9UIS9 RNU6-166P-201ENST00000384371 107 ntBASIC3.81□□□□□ -1.8
MBD1Q9UIS9 Y_RNA.569-201ENST00000384749 103 ntBASIC3.81□□□□□ -1.8
MBD1Q9UIS9 MIR199A2-201ENST00000385289 110 ntBASIC3.81□□□□□ -1.8
MBD1Q9UIS9 SNORA40C-201ENST00000391285 128 ntBASIC3.81□□□□□ -1.8
MBD1Q9UIS9 BTF3L4P2-201ENST00000392798 346 ntBASIC3.81□□□□□ -1.8
MBD1Q9UIS9 AL138878.1-201ENST00000405131 347 ntBASIC3.81□□□□□ -1.8
MBD1Q9UIS9 RNU2-61P-201ENST00000411069 191 ntBASIC3.81□□□□□ -1.8
MBD1Q9UIS9 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.81□□□□□ -1.8
MBD1Q9UIS9 MTCO1P5-201ENST00000433573 344 ntBASIC3.81□□□□□ -1.8
MBD1Q9UIS9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.81□□□□□ -1.8
MBD1Q9UIS9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.81□□□□□ -1.8
MBD1Q9UIS9 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.81□□□□□ -1.8
MBD1Q9UIS9 RPS20P22-201ENST00000473700 357 ntBASIC3.81□□□□□ -1.8
MBD1Q9UIS9 RPL31P13-201ENST00000484151 370 ntBASIC3.81□□□□□ -1.8
MBD1Q9UIS9 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.81□□□□□ -1.8
MBD1Q9UIS9 RNA5SP208-201ENST00000516156 78 ntBASIC3.81□□□□□ -1.8
MBD1Q9UIS9 Y_RNA.679-201ENST00000516416 91 ntBASIC3.81□□□□□ -1.8
MBD1Q9UIS9 SNORA31.18-201ENST00000517043 134 ntBASIC3.81□□□□□ -1.8
MBD1Q9UIS9 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.81□□□□□ -1.8
MBD1Q9UIS9 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.81□□□□□ -1.8
MBD1Q9UIS9 AL365265.1-201ENST00000621045 234 ntBASIC3.81□□□□□ -1.8
MBD1Q9UIS9 U4.7-201ENST00000638126 106 ntBASIC3.81□□□□□ -1.8
MBD1Q9UIS9 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MBD1Q9UIS9 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
MBD1Q9UIS9 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
MBD1Q9UIS9 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.81□□□□□ -1.8
MBD1Q9UIS9 UBE3AP2-201ENST00000429033 2259 ntBASIC3.81□□□□□ -1.8
MBD1Q9UIS9 AC233981.2-201ENST00000611524 1614 ntBASIC3.81□□□□□ -1.8
MBD1Q9UIS9 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MBD1Q9UIS9 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MBD1Q9UIS9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MBD1Q9UIS9 RNU6-173P-201ENST00000364215 104 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 RNU6-17P-201ENST00000384245 107 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 RNU6-318P-201ENST00000384283 103 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 RNU6-18P-201ENST00000384527 107 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 MIR607-201ENST00000385241 96 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 RNU6-918P-201ENST00000391219 106 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 RNU4-30P-201ENST00000410245 143 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 RNU6-394P-201ENST00000410735 107 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 Z85995.1-201ENST00000415547 335 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.8□□□□□ -1.8
MBD1Q9UIS9 SNORA71B-202ENST00000439232 272 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 AC009296.1-201ENST00000443146 155 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 AC016700.2-201ENST00000446011 156 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.8□□□□□ -1.8
MBD1Q9UIS9 BX510359.1-201ENST00000456973 237 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 Y_RNA.638-201ENST00000459374 113 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.8□□□□□ -1.8
MBD1Q9UIS9 AL160314.1-201ENST00000490836 438 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 AC025445.1-201ENST00000502728 300 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 RAC1P2-201ENST00000511164 579 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 AC010265.1-201ENST00000513509 211 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.8□□□□□ -1.8
MBD1Q9UIS9 SCARNA15.2-201ENST00000516409 127 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 SNORA31.19-201ENST00000517079 126 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 MRPS18CP4-201ENST00000535821 231 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 AC027288.2-201ENST00000553028 243 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 AC090877.1-201ENST00000561418 344 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 FAM60BP-201ENST00000578364 658 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 AC104465.1-201ENST00000611365 139 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 AL591424.2-201ENST00000617023 128 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 SCARNA4-201ENST00000629045 128 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.8□□□□□ -1.8
MBD1Q9UIS9 BX322639.1-202ENST00000423987 2213 ntBASIC3.8□□□□□ -1.8
MBD1Q9UIS9 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.8□□□□□ -1.8
MBD1Q9UIS9 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MBD1Q9UIS9 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.8□□□□□ -1.8
MBD1Q9UIS9 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MBD1Q9UIS9 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MBD1Q9UIS9 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.79□□□□□ -1.8
MBD1Q9UIS9 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
MBD1Q9UIS9 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MBD1Q9UIS9 SNORA25.1-201ENST00000362326 128 ntBASIC3.79□□□□□ -1.8
MBD1Q9UIS9 Y_RNA.82-201ENST00000363000 102 ntBASIC3.79□□□□□ -1.8
MBD1Q9UIS9 Y_RNA.92-201ENST00000363043 102 ntBASIC3.79□□□□□ -1.8
MBD1Q9UIS9 RNU6-879P-201ENST00000364328 108 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms