Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 RNU6-336P-201ENST00000364891 107 ntBASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 RNU6-827P-201ENST00000365553 106 ntBASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 SNORA9-201ENST00000384215 133 ntBASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 RNU6-332P-201ENST00000391193 108 ntBASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 AL139095.1-201ENST00000404326 391 ntBASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 MTND4LP11-201ENST00000422184 280 ntBASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 MTCO2P3-201ENST00000442543 421 ntBASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 MTND4P18-201ENST00000447010 465 ntBASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 AC080013.2-201ENST00000460866 323 ntBASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 MTCYBP18-201ENST00000501056 747 ntBASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 RNA5SP402-201ENST00000517148 110 ntBASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 AC010186.2-204ENST00000537668 439 ntBASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 AP000763.2-201ENST00000540641 163 ntBASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 ELOCP29-201ENST00000588193 334 ntBASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 AC073410.2-201ENST00000603240 332 ntBASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 DUXAP9-208ENST00000622815 614 ntBASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 AL137790.1-201ENST00000634283 177 ntBASIC2.71□□□□□ -1.98
LIMA1Q9UHB6 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 OR56A5-201ENST00000340110 738 ntBASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 RNU6-859P-201ENST00000362728 107 ntBASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 Y_RNA.373-201ENST00000365600 103 ntBASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 SNORA41-201ENST00000384675 132 ntBASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 MIR27B-201ENST00000385129 97 ntBASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 SNORD73A-201ENST00000386062 65 ntBASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 RNA5SP118-201ENST00000410385 109 ntBASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 CR769767.1-201ENST00000436337 346 ntBASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 AC107083.1-201ENST00000439643 279 ntBASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 AC007969.2-201ENST00000441891 191 ntBASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 AC104389.3-201ENST00000445629 235 ntBASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 RPL7P12-201ENST00000446719 750 ntBASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 SNORD109B-201ENST00000458961 67 ntBASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 SNORD109A-201ENST00000459128 67 ntBASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 AIG1P1-201ENST00000503376 148 ntBASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 AK3P2-201ENST00000507976 429 ntBASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 AP005597.4-201ENST00000526762 229 ntBASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 AC025423.5-201ENST00000550230 219 ntBASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 AC105137.2-201ENST00000569073 466 ntBASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 MIR3200-201ENST00000580767 85 ntBASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 AL355073.2-201ENST00000612106 557 ntBASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 AC104237.2-201ENST00000612456 443 ntBASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.7□□□□□ -1.98
LIMA1Q9UHB6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LIMA1Q9UHB6 RNU1-57P-201ENST00000384491 166 ntBASIC2.69□□□□□ -1.98
LIMA1Q9UHB6 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LIMA1Q9UHB6 FGF7P8-201ENST00000402994 292 ntBASIC2.69□□□□□ -1.98
LIMA1Q9UHB6 RNU6-1245P-201ENST00000411130 106 ntBASIC2.69□□□□□ -1.98
LIMA1Q9UHB6 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.69□□□□□ -1.98
LIMA1Q9UHB6 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.69□□□□□ -1.98
LIMA1Q9UHB6 EIF4EP4-201ENST00000424916 578 ntBASIC2.69□□□□□ -1.98
LIMA1Q9UHB6 RPL23AP83-201ENST00000434984 473 ntBASIC2.69□□□□□ -1.98
LIMA1Q9UHB6 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LIMA1Q9UHB6 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.69□□□□□ -1.98
LIMA1Q9UHB6 RNU6-358P-201ENST00000516564 75 ntBASIC2.69□□□□□ -1.98
LIMA1Q9UHB6 AC103996.1-201ENST00000555468 102 ntBASIC2.69□□□□□ -1.98
LIMA1Q9UHB6 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.69□□□□□ -1.98
LIMA1Q9UHB6 CTHRC1P1-201ENST00000605383 469 ntBASIC2.69□□□□□ -1.98
LIMA1Q9UHB6 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
LIMA1Q9UHB6 AC099654.14-201ENST00000638599 341 ntBASIC2.69□□□□□ -1.98
LIMA1Q9UHB6 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
LIMA1Q9UHB6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
LIMA1Q9UHB6 ZNF271P-202ENST00000465539 1970 ntBASIC2.69□□□□□ -1.98
LIMA1Q9UHB6 AC069528.2-201ENST00000624849 1991 ntBASIC2.69□□□□□ -1.98
LIMA1Q9UHB6 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LIMA1Q9UHB6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
LIMA1Q9UHB6 MIR186-201ENST00000384988 86 ntBASIC2.68□□□□□ -1.98
LIMA1Q9UHB6 RPS29P13-201ENST00000402041 169 ntBASIC2.68□□□□□ -1.98
LIMA1Q9UHB6 RNU2-23P-201ENST00000410545 195 ntBASIC2.68□□□□□ -1.98
LIMA1Q9UHB6 Y_RNA.604-201ENST00000410574 102 ntBASIC2.68□□□□□ -1.98
LIMA1Q9UHB6 RNU6-293P-201ENST00000411259 106 ntBASIC2.68□□□□□ -1.98
LIMA1Q9UHB6 EEF1B2P7-201ENST00000451177 676 ntBASIC2.68□□□□□ -1.98
LIMA1Q9UHB6 RPL30P12-201ENST00000474666 353 ntBASIC2.68□□□□□ -1.98
LIMA1Q9UHB6 AC097462.2-201ENST00000504623 481 ntBASIC2.68□□□□□ -1.98
LIMA1Q9UHB6 PRDX4P1-201ENST00000507189 574 ntBASIC2.68□□□□□ -1.98
LIMA1Q9UHB6 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.68□□□□□ -1.98
LIMA1Q9UHB6 AC109329.1-201ENST00000518744 317 ntBASIC2.68□□□□□ -1.98
LIMA1Q9UHB6 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.68□□□□□ -1.98
LIMA1Q9UHB6 AC060780.3-201ENST00000589464 80 ntBASIC2.68□□□□□ -1.98
LIMA1Q9UHB6 BNIP3P16-201ENST00000589779 534 ntBASIC2.68□□□□□ -1.98
LIMA1Q9UHB6 FAM157A-202ENST00000615155 405 ntBASIC2.68□□□□□ -1.98
LIMA1Q9UHB6 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.68□□□□□ -1.98
LIMA1Q9UHB6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
LIMA1Q9UHB6 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
LIMA1Q9UHB6 AC016717.2-201ENST00000609089 5141 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms