Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SNORA48.11-201ENST00000517015 89 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 AC118273.2-201ENST00000532092 465 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 CYCSP26-201ENST00000534107 320 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 RPS3AP23-202ENST00000574601 686 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 MIR5089-201ENST00000580047 84 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 MIR4524B-201ENST00000581569 115 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 MIR4448-201ENST00000584360 86 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 AC073648.5-201ENST00000603502 305 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 AC009314.1-201ENST00000603871 304 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 AC025449.1-201ENST00000603896 529 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 AC008536.2-201ENST00000607284 349 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 AC009090.3-201ENST00000616553 565 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 AC022079.1-201ENST00000621546 602 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 AC007792.1-201ENST00000623023 402 ntBASIC1.75□□□□□ -2.13
CLCF1Q9UBD9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 KPNA2P1-201ENST00000458289 1591 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 RNU6-655P-201ENST00000362858 107 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 RNU6-434P-201ENST00000384376 107 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 RNU6-393P-201ENST00000384475 107 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 BTF3L4P1-201ENST00000413813 468 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 AL591043.1-201ENST00000432461 424 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 AL021397.1-201ENST00000451806 248 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 AL356010.1-201ENST00000456364 102 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 AC025033.1-201ENST00000463883 194 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 AC010424.1-201ENST00000506336 297 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 AC079140.5-201ENST00000507882 310 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 MTCYBP40-201ENST00000509390 1135 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 AC117532.1-201ENST00000514638 323 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 RNA5SP182-201ENST00000516064 82 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 RNU6-295P-201ENST00000516901 104 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 RNA5SP364-201ENST00000516938 78 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 RNU6-586P-201ENST00000517265 104 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 IL7-206ENST00000520269 456 ntTSL 3 BASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 MIR3126-201ENST00000577443 74 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 AC025165.5-201ENST00000602802 578 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 APOOP1-201ENST00000604695 592 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 NDUFA8P1-201ENST00000605525 367 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 AL161423.1-201ENST00000613700 262 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 Z69720.2-201ENST00000624755 279 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 ZNF680P1-201ENST00000436625 1469 ntBASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
CLCF1Q9UBD9 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 RNU6-527P-201ENST00000363425 104 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 RNA5SP160-201ENST00000364866 120 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 SNORD116-9-201ENST00000384000 95 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 RNU5A-6P-201ENST00000384136 116 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 SNORD116-3-201ENST00000384287 95 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 Y_RNA.480-201ENST00000384364 102 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 SNORD116-7-201ENST00000384404 95 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 SNORD116-5-201ENST00000384462 95 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 MIR583-201ENST00000384846 75 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 RNA5SP270-201ENST00000411361 118 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 MTCO2P34-201ENST00000421994 607 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 AIMP1P2-201ENST00000425294 312 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 MTCO1P19-201ENST00000443487 500 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 PRPS1P1-201ENST00000445305 876 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 snoU13.14-201ENST00000459372 104 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 MTCO3P7-201ENST00000510008 774 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 MIR514B-201ENST00000516774 80 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 IMMP1LP2-201ENST00000552954 492 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 AC110588.1-201ENST00000559699 137 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 AC093249.1-201ENST00000567049 203 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 AC006362.1-201ENST00000567392 174 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 AC002984.1-201ENST00000591692 448 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 MIR6845-201ENST00000613182 61 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 AC136475.10-201ENST00000620253 385 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 AC005609.4-201ENST00000625071 447 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 AC090582.1-201ENST00000636321 199 ntBASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.73□□□□□ -2.13
CLCF1Q9UBD9 MTND4P14-201ENST00000435799 1354 ntBASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 RNU6-212P-201ENST00000362642 104 ntBASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 RNU6-1210P-201ENST00000363775 107 ntBASIC1.72□□□□□ -2.13
CLCF1Q9UBD9 RNU6-1032P-201ENST00000384100 107 ntBASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 178.9 ms