Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 RPL23AP88-201ENST00000605759 454 ntBASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.77□□□□□ -1.97
SMARCAL1Q9NZC9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 RNU4-76P-201ENST00000364509 141 ntBASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 Y_RNA.473-201ENST00000384333 102 ntBASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 RNU6-601P-201ENST00000384540 107 ntBASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 RNU6-306P-201ENST00000384617 107 ntBASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 AL445529.1-201ENST00000398713 389 ntBASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 AL135938.1-201ENST00000443141 297 ntBASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 AC007677.1-201ENST00000445757 515 ntBASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 RNU7-187P-201ENST00000458985 68 ntBASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 SNORD19B-201ENST00000459623 84 ntBASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 AC026801.1-201ENST00000497178 464 ntBASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 SEM1P1-201ENST00000506694 209 ntBASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 AC096745.1-201ENST00000509945 370 ntBASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 Y_RNA.687-201ENST00000516558 91 ntBASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 Y_RNA.701-201ENST00000516812 110 ntBASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 Y_RNA.718-201ENST00000517110 102 ntBASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 APOOP3-201ENST00000536787 586 ntBASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 AC100830.2-201ENST00000581636 240 ntBASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 MIR3609-201ENST00000582661 80 ntBASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 AL121917.1-203ENST00000605534 577 ntBASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 AC084781.2-201ENST00000615568 161 ntBASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 AL160413.1-201ENST00000622780 310 ntBASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 Z69720.2-201ENST00000624755 279 ntBASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SMARCAL1Q9NZC9 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 RNU6-898P-201ENST00000365627 104 ntBASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 RNU1-109P-201ENST00000383960 147 ntBASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 RNU6-1297P-201ENST00000384415 104 ntBASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 SNORD56-201ENST00000413522 71 ntBASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 AL096701.2-201ENST00000416920 238 ntBASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 AL513477.1-202ENST00000417061 214 ntBASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 AC087499.2-201ENST00000432861 149 ntBASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 AC236972.2-201ENST00000434979 310 ntBASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 AL031274.1-201ENST00000450334 232 ntBASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 RNU6-1213P-201ENST00000517075 94 ntBASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 IMMP1LP2-201ENST00000552954 492 ntBASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 AC010620.2-201ENST00000600135 313 ntBASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 AL137847.3-201ENST00000611521 109 ntBASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 AC010378.1-201ENST00000619270 362 ntBASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 AC073308.1-201ENST00000623696 305 ntBASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SMARCAL1Q9NZC9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 Y_RNA.151-201ENST00000363566 112 ntBASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 RNU6-1180P-201ENST00000364935 107 ntBASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 Y_RNA.482-201ENST00000384377 111 ntBASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 Y_RNA.579-201ENST00000390939 94 ntBASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 MIR888-201ENST00000401186 77 ntBASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 Z92545.1-201ENST00000411782 234 ntBASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 RPL26P27-201ENST00000414397 437 ntBASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 AF228730.4-201ENST00000421457 183 ntBASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 UBE2V1P4-201ENST00000425374 344 ntBASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 TOMM20P4-201ENST00000427861 435 ntBASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 AC098831.1-201ENST00000440661 216 ntBASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 MTATP6P7-201ENST00000453315 681 ntBASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 RPL23AP45-201ENST00000476406 468 ntBASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 RPS27AP10-201ENST00000496103 208 ntBASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 AL391261.3-201ENST00000557194 520 ntBASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 AC008121.1-201ENST00000603244 268 ntBASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 AC126177.8-201ENST00000618339 1015 ntBASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 AC099654.10-201ENST00000640395 161 ntBASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SMARCAL1Q9NZC9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 AC022336.2-201ENST00000568966 2538 ntBASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 RNU6-827P-201ENST00000365553 106 ntBASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 RNU6-72P-201ENST00000384285 79 ntBASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 MIR518D-201ENST00000385014 87 ntBASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 MIR34A-201ENST00000385130 110 ntBASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 RNY4P36-201ENST00000391116 96 ntBASIC2.73□□□□□ -1.97
SMARCAL1Q9NZC9 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms