Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 AC243964.1-201ENST00000441814 261 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 RPS29P29-201ENST00000456396 171 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 RNU1-123P-201ENST00000458950 160 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 MTND4P16-201ENST00000466108 1367 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 RNU7-51P-201ENST00000516560 62 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 RN7SKP88-201ENST00000516847 250 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 AC011979.2-201ENST00000527568 352 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 AP003168.1-201ENST00000530091 307 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 AP002453.2-201ENST00000533503 320 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 ADI1P3-201ENST00000549509 470 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 AL161670.1-201ENST00000554348 137 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 MIR4742-201ENST00000581069 85 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 MIR3136-201ENST00000583498 78 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 AC110760.3-201ENST00000598794 467 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 AL158032.1-201ENST00000605401 106 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 RNU6-87P-201ENST00000607561 108 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 AL021879.1-201ENST00000611756 288 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 7SK.8-201ENST00000612110 250 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 AC083806.3-201ENST00000614016 455 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 7SK.11-201ENST00000615477 250 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 7SK.13-201ENST00000622040 250 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 AC097372.5-201ENST00000623665 376 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 AL159152.1-201ENST00000635019 2587 ntBASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.51□□□□□ -2.33
CDC42SE1Q9NRR8 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 AC073343.1-201ENST00000328239 651 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 AC062016.1-201ENST00000355719 319 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 RNU5E-10P-201ENST00000363506 118 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 RNU5E-7P-201ENST00000365290 117 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 SNORA4.2-201ENST00000365313 147 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 MIR515-2-201ENST00000384883 83 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 MIR515-1-201ENST00000384884 83 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 CYCSP33-201ENST00000414485 327 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 ARL5AP1-201ENST00000418991 388 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 AL591043.1-201ENST00000432461 424 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 AC132479.1-201ENST00000449160 144 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 AC104982.1-201ENST00000478775 574 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 AL358832.1-201ENST00000497800 389 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 AC108078.2-201ENST00000510750 236 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 PSMC1P5-201ENST00000512850 177 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 RNA5SP337-201ENST00000517007 109 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 RNA5SP503-201ENST00000517047 117 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 AC022616.6-201ENST00000520479 119 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 MTATP6P15-201ENST00000527233 835 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 AP003033.1-201ENST00000527244 415 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 AC110588.1-201ENST00000559699 137 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 MIR4319-201ENST00000577285 85 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 MIR5697-201ENST00000578045 78 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 SNORA59B-202ENST00000578183 701 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 DNAJC19P3-201ENST00000594491 331 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 AC073539.2-201ENST00000597113 165 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 BNIP3P8-201ENST00000597863 560 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 AC112187.2-201ENST00000604345 283 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 BNIP3P19-201ENST00000605397 577 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 AC026790.2-201ENST00000606282 430 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 AL139286.2-201ENST00000606838 396 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 Z69720.2-201ENST00000624755 279 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 AC068647.2-201ENST00000637380 353 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 AC106858.1-201ENST00000637497 429 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 AC245060.5-201ENST00000610778 3293 ntBASIC0.5□□□□□ -2.33
CDC42SE1Q9NRR8 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 SNORD56.2-201ENST00000363242 71 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 RNU1-96P-201ENST00000364163 162 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 RNU4-91P-201ENST00000364778 135 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 SNORD31B-201ENST00000364977 69 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 RNU6-43P-201ENST00000384302 107 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 MIR583-201ENST00000384846 75 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 RNU6-607P-201ENST00000411283 108 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 RPL21P90-201ENST00000415692 466 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 AC114482.1-201ENST00000418010 247 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 AC006366.1-201ENST00000422002 759 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 USP9YP14-201ENST00000430663 563 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 AC000111.3-201ENST00000433478 193 ntBASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.49□□□□□ -2.33
CDC42SE1Q9NRR8 MTND3P1-201ENST00000441336 220 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms