Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 RNU6-214P-201ENST00000384130 107 ntBASIC2.51□□□□□ -2.01
SIX2Q9NPC8 SNORD73A-201ENST00000386062 65 ntBASIC2.51□□□□□ -2.01
SIX2Q9NPC8 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SIX2Q9NPC8 MIR548K-201ENST00000408406 116 ntBASIC2.51□□□□□ -2.01
SIX2Q9NPC8 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.51□□□□□ -2.01
SIX2Q9NPC8 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.51□□□□□ -2.01
SIX2Q9NPC8 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.51□□□□□ -2.01
SIX2Q9NPC8 MTND3P23-201ENST00000431980 347 ntBASIC2.51□□□□□ -2.01
SIX2Q9NPC8 HIGD1AP11-201ENST00000438361 280 ntBASIC2.51□□□□□ -2.01
SIX2Q9NPC8 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.51□□□□□ -2.01
SIX2Q9NPC8 HMGN2P10-201ENST00000448085 265 ntBASIC2.51□□□□□ -2.01
SIX2Q9NPC8 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC2.51□□□□□ -2.01
SIX2Q9NPC8 BTF3P15-201ENST00000455606 336 ntBASIC2.51□□□□□ -2.01
SIX2Q9NPC8 snoU109.2-201ENST00000459316 135 ntBASIC2.51□□□□□ -2.01
SIX2Q9NPC8 AC087190.1-201ENST00000484462 480 ntBASIC2.51□□□□□ -2.01
SIX2Q9NPC8 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.51□□□□□ -2.01
SIX2Q9NPC8 RNU6-277P-201ENST00000516272 106 ntBASIC2.51□□□□□ -2.01
SIX2Q9NPC8 RNU6-711P-201ENST00000517255 106 ntBASIC2.51□□□□□ -2.01
SIX2Q9NPC8 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC2.51□□□□□ -2.01
SIX2Q9NPC8 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.51□□□□□ -2.01
SIX2Q9NPC8 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.51□□□□□ -2.01
SIX2Q9NPC8 AC025281.1-201ENST00000567026 265 ntBASIC2.51□□□□□ -2.01
SIX2Q9NPC8 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.51□□□□□ -2.01
SIX2Q9NPC8 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.51□□□□□ -2.01
SIX2Q9NPC8 AC008121.1-201ENST00000603244 268 ntBASIC2.51□□□□□ -2.01
SIX2Q9NPC8 SCARNA4-202ENST00000625402 129 ntBASIC2.51□□□□□ -2.01
SIX2Q9NPC8 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SIX2Q9NPC8 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SIX2Q9NPC8 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
SIX2Q9NPC8 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.5□□□□□ -2.01
SIX2Q9NPC8 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SIX2Q9NPC8 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
SIX2Q9NPC8 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SIX2Q9NPC8 Y_RNA.61-201ENST00000362835 102 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 RNU4-73P-201ENST00000363164 141 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 SNORA14A-201ENST00000364773 135 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 RNU6-1329P-201ENST00000365664 107 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 Y_RNA.474-201ENST00000384341 102 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 SNORA67.4-201ENST00000384688 142 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 U3.26-201ENST00000391236 204 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 AL139095.1-201ENST00000404326 391 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 MIR548F5-201ENST00000408421 86 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 SNORD56-201ENST00000413522 71 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 AL590632.1-201ENST00000424289 371 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 RPS15AP28-201ENST00000435088 386 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.5□□□□□ -2.01
SIX2Q9NPC8 MTND1P17-201ENST00000448961 204 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.5□□□□□ -2.01
SIX2Q9NPC8 AL031183.1-201ENST00000457667 207 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 AC092436.3-201ENST00000511788 257 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.5□□□□□ -2.01
SIX2Q9NPC8 AC021269.2-201ENST00000532318 330 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 AC026371.1-201ENST00000551867 419 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 AL163153.1-201ENST00000554223 283 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 AC021739.1-201ENST00000559631 174 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 MIR4790-201ENST00000577799 79 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 MIR3162-201ENST00000581818 82 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 MIR5007-201ENST00000583098 95 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SIX2Q9NPC8 ELOCP5-201ENST00000604924 333 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.5□□□□□ -2.01
SIX2Q9NPC8 AL161629.2-201ENST00000615347 275 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.5□□□□□ -2.01
SIX2Q9NPC8 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.5□□□□□ -2.01
SIX2Q9NPC8 ZNF271P-202ENST00000465539 1970 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 MAPK10-266ENST00000641066 6555 ntBASIC2.5□□□□□ -2.01
SIX2Q9NPC8 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.49□□□□□ -2.01
SIX2Q9NPC8 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SIX2Q9NPC8 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SIX2Q9NPC8 AC023141.4-201ENST00000412031 328 ntBASIC2.49□□□□□ -2.01
SIX2Q9NPC8 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.49□□□□□ -2.01
SIX2Q9NPC8 AL139396.1-201ENST00000421137 167 ntBASIC2.49□□□□□ -2.01
SIX2Q9NPC8 UBE2V1P4-201ENST00000425374 344 ntBASIC2.49□□□□□ -2.01
SIX2Q9NPC8 SNAP23P1-201ENST00000433229 246 ntBASIC2.49□□□□□ -2.01
SIX2Q9NPC8 MTND4P17-201ENST00000470444 350 ntBASIC2.49□□□□□ -2.01
SIX2Q9NPC8 MTND5P5-201ENST00000503764 376 ntBASIC2.49□□□□□ -2.01
SIX2Q9NPC8 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
SIX2Q9NPC8 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SIX2Q9NPC8 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.49□□□□□ -2.01
SIX2Q9NPC8 AC104576.1-201ENST00000524225 88 ntBASIC2.49□□□□□ -2.01
SIX2Q9NPC8 AP004607.1-201ENST00000524456 203 ntBASIC2.49□□□□□ -2.01
SIX2Q9NPC8 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.49□□□□□ -2.01
SIX2Q9NPC8 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.49□□□□□ -2.01
SIX2Q9NPC8 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.49□□□□□ -2.01
SIX2Q9NPC8 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.49□□□□□ -2.01
SIX2Q9NPC8 POLR3GP2-201ENST00000588366 668 ntBASIC2.49□□□□□ -2.01
SIX2Q9NPC8 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.49□□□□□ -2.01
SIX2Q9NPC8 AC064836.2-201ENST00000609491 462 ntBASIC2.49□□□□□ -2.01
SIX2Q9NPC8 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.49□□□□□ -2.01
SIX2Q9NPC8 AC010378.1-201ENST00000619270 362 ntBASIC2.49□□□□□ -2.01
SIX2Q9NPC8 MIR6766-201ENST00000622641 72 ntBASIC2.49□□□□□ -2.01
SIX2Q9NPC8 AC138627.2-201ENST00000624202 601 ntBASIC2.49□□□□□ -2.01
SIX2Q9NPC8 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.49□□□□□ -2.01
SIX2Q9NPC8 MIR1302-1-201ENST00000637932 143 ntBASIC2.49□□□□□ -2.01
SIX2Q9NPC8 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SIX2Q9NPC8 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.49□□□□□ -2.01
SIX2Q9NPC8 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.48□□□□□ -2.01
SIX2Q9NPC8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SIX2Q9NPC8 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
SIX2Q9NPC8 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms