Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.2□□□□□ -2.22
VCX3AQ9NNX9 AL391994.1-201ENST00000254724 282 ntBASIC1.2□□□□□ -2.22
VCX3AQ9NNX9 RNU6-527P-201ENST00000363425 104 ntBASIC1.2□□□□□ -2.22
VCX3AQ9NNX9 SNORD1A-201ENST00000364968 72 ntBASIC1.2□□□□□ -2.22
VCX3AQ9NNX9 RNU6-61P-201ENST00000365528 109 ntBASIC1.2□□□□□ -2.22
VCX3AQ9NNX9 RNU2-39P-201ENST00000410604 198 ntBASIC1.2□□□□□ -2.22
VCX3AQ9NNX9 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.2□□□□□ -2.22
VCX3AQ9NNX9 RPS27P16-201ENST00000425758 201 ntBASIC1.2□□□□□ -2.22
VCX3AQ9NNX9 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.2□□□□□ -2.22
VCX3AQ9NNX9 RPL26P26-201ENST00000480251 434 ntBASIC1.2□□□□□ -2.22
VCX3AQ9NNX9 AF131216.2-201ENST00000512316 564 ntBASIC1.2□□□□□ -2.22
VCX3AQ9NNX9 AC090821.2-201ENST00000523552 176 ntBASIC1.2□□□□□ -2.22
VCX3AQ9NNX9 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.2□□□□□ -2.22
VCX3AQ9NNX9 AC091489.2-201ENST00000566263 604 ntBASIC1.2□□□□□ -2.22
VCX3AQ9NNX9 AC005668.1-201ENST00000571142 476 ntBASIC1.2□□□□□ -2.22
VCX3AQ9NNX9 AL034555.1-201ENST00000604816 211 ntBASIC1.2□□□□□ -2.22
VCX3AQ9NNX9 AC018714.1-201ENST00000605028 208 ntBASIC1.2□□□□□ -2.22
VCX3AQ9NNX9 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.2□□□□□ -2.22
VCX3AQ9NNX9 AP002371.2-201ENST00000624450 503 ntBASIC1.2□□□□□ -2.22
VCX3AQ9NNX9 MTND5P9-201ENST00000503854 1755 ntBASIC1.2□□□□□ -2.22
VCX3AQ9NNX9 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 Y_RNA.333-201ENST00000365274 102 ntBASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 MIR558-201ENST00000384920 94 ntBASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 RNU2-3P-201ENST00000410144 191 ntBASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 AC123900.1-201ENST00000420390 96 ntBASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 MRPL35P3-201ENST00000421557 364 ntBASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 AC137499.1-201ENST00000427602 88 ntBASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 UBE2V1P8-201ENST00000437166 265 ntBASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 MTND1P30-201ENST00000441241 901 ntBASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 HMGN1P13-201ENST00000505795 138 ntBASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 AC117522.1-201ENST00000509821 380 ntBASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 MTND3P5-201ENST00000512798 333 ntBASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 AL512310.1-201ENST00000548639 172 ntBASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 MIR5697-201ENST00000578045 78 ntBASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 AP000720.1-201ENST00000625091 483 ntBASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 AC095038.3-201ENST00000634439 195 ntBASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 AL445984.1-201ENST00000637834 659 ntBASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 U4.7-201ENST00000638126 106 ntBASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 ICE2P2-201ENST00000483823 2787 ntBASIC1.19□□□□□ -2.22
VCX3AQ9NNX9 AC233981.2-201ENST00000611524 1614 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 MIR208A-201ENST00000362287 71 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 Y_RNA.22-201ENST00000362492 102 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 SNORA22-201ENST00000383907 134 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 RNU6-641P-201ENST00000384006 107 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 SNORA22C-201ENST00000384614 134 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 CYCSP33-201ENST00000414485 327 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 AL589872.1-201ENST00000426602 288 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 MED13P1-201ENST00000428342 171 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 RPS24P1-201ENST00000438550 371 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 JTBP1-201ENST00000441314 247 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 SNRPEP8-201ENST00000442866 260 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 RPS29P28-201ENST00000446439 141 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 RPS27AP8-201ENST00000452665 445 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 MTCO2P29-201ENST00000465212 189 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 AC108078.1-201ENST00000508073 725 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 AC090888.2-201ENST00000559765 1144 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 MIR5692A1-201ENST00000580523 69 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 AC103987.3-201ENST00000582071 292 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 MIR4999-201ENST00000585029 91 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 AL031775.1-201ENST00000607014 887 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 RNU6-87P-201ENST00000607561 108 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 AL392048.1-201ENST00000613946 534 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 ZNF72P-201ENST00000425869 1908 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 AP000560.1-201ENST00000624150 1937 ntBASIC1.18□□□□□ -2.22
VCX3AQ9NNX9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 RNU6-26P-201ENST00000383985 107 ntBASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 MIR548B-201ENST00000385247 97 ntBASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 RNU6-1176P-201ENST00000390955 107 ntBASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 AL627390.1-201ENST00000396055 340 ntBASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 Z92545.1-201ENST00000411782 234 ntBASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 ELOCP4-201ENST00000420090 333 ntBASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 AC139712.2-201ENST00000424302 339 ntBASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 C8orf59P1-201ENST00000429930 303 ntBASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 HSPE1P9-201ENST00000440046 311 ntBASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 ATP5EP1-201ENST00000510257 156 ntBASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 AC005741.1-201ENST00000511094 432 ntBASIC1.17□□□□□ -2.22
VCX3AQ9NNX9 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms