Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AL589823.1-201ENST00000429577 183 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 AL078601.1-201ENST00000444542 271 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 NDUFB1P2-201ENST00000449477 176 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.96□□□□□ -2.1
NXF3Q9H4D5 AL162395.1-201ENST00000457882 422 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 TPTE2P5-203ENST00000458118 728 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.96□□□□□ -2.1
NXF3Q9H4D5 AC117503.1-201ENST00000472241 394 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.96□□□□□ -2.1
NXF3Q9H4D5 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.96□□□□□ -2.1
NXF3Q9H4D5 AC018437.1-201ENST00000492214 406 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.96□□□□□ -2.1
NXF3Q9H4D5 RNA5SP503-201ENST00000517047 117 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 SNORA31.19-201ENST00000517079 126 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 AP003034.1-201ENST00000534621 422 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.96□□□□□ -2.1
NXF3Q9H4D5 AL121821.2-201ENST00000556081 394 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 AL133241.1-201ENST00000556832 487 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 LINC00933-203ENST00000559812 219 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.96□□□□□ -2.1
NXF3Q9H4D5 MIR4703-201ENST00000577728 79 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 MIR4782-201ENST00000577987 79 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.96□□□□□ -2.1
NXF3Q9H4D5 MIR548AC-201ENST00000585049 88 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.96□□□□□ -2.1
NXF3Q9H4D5 AC004223.2-201ENST00000590309 544 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 DEFB131E-202ENST00000602581 683 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 AL138889.2-201ENST00000603883 242 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 AC008945.2-201ENST00000606056 604 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 MIR6134-201ENST00000617606 109 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 AC024581.2-201ENST00000619986 252 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.96□□□□□ -2.1
NXF3Q9H4D5 OR5AK4P-201ENST00000635912 903 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 AC068137.4-201ENST00000638485 296 ntBASIC1.96□□□□□ -2.1
NXF3Q9H4D5 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
NXF3Q9H4D5 CDC27P3-201ENST00000635418 1910 ntBASIC1.95□□□□□ -2.1
NXF3Q9H4D5 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
NXF3Q9H4D5 KPNA2P1-201ENST00000458289 1591 ntBASIC1.95□□□□□ -2.1
NXF3Q9H4D5 MIR412-201ENST00000362142 91 ntBASIC1.95□□□□□ -2.1
NXF3Q9H4D5 RNU6-1287P-201ENST00000362914 107 ntBASIC1.95□□□□□ -2.1
NXF3Q9H4D5 Y_RNA.517-201ENST00000384551 106 ntBASIC1.95□□□□□ -2.1
NXF3Q9H4D5 RNU6-1060P-201ENST00000384664 107 ntBASIC1.95□□□□□ -2.1
NXF3Q9H4D5 CIR1P3-201ENST00000405137 479 ntBASIC1.95□□□□□ -2.1
NXF3Q9H4D5 RNU4-46P-201ENST00000410818 138 ntBASIC1.95□□□□□ -2.1
NXF3Q9H4D5 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.95□□□□□ -2.1
NXF3Q9H4D5 SRIP2-201ENST00000428470 166 ntBASIC1.95□□□□□ -2.1
NXF3Q9H4D5 RPL30P4-201ENST00000429309 333 ntBASIC1.95□□□□□ -2.1
NXF3Q9H4D5 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.95□□□□□ -2.1
NXF3Q9H4D5 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.95□□□□□ -2.1
NXF3Q9H4D5 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.95□□□□□ -2.1
NXF3Q9H4D5 AC124916.1-201ENST00000444020 547 ntBASIC1.95□□□□□ -2.1
NXF3Q9H4D5 RPS29P15-201ENST00000458329 171 ntBASIC1.95□□□□□ -2.1
NXF3Q9H4D5 RNA5SP233-201ENST00000459153 113 ntBASIC1.95□□□□□ -2.1
NXF3Q9H4D5 AC090515.1-201ENST00000465295 476 ntBASIC1.95□□□□□ -2.1
NXF3Q9H4D5 AL121769.1-201ENST00000469473 401 ntBASIC1.95□□□□□ -2.1
NXF3Q9H4D5 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.95□□□□□ -2.1
NXF3Q9H4D5 AC107401.1-201ENST00000503426 685 ntBASIC1.95□□□□□ -2.1
NXF3Q9H4D5 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.95□□□□□ -2.1
NXF3Q9H4D5 AC112206.3-201ENST00000514578 389 ntBASIC1.95□□□□□ -2.1
NXF3Q9H4D5 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.95□□□□□ -2.1
NXF3Q9H4D5 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.95□□□□□ -2.1
NXF3Q9H4D5 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.95□□□□□ -2.1
NXF3Q9H4D5 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.95□□□□□ -2.1
NXF3Q9H4D5 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.95□□□□□ -2.1
NXF3Q9H4D5 AC008536.2-201ENST00000607284 349 ntBASIC1.95□□□□□ -2.1
NXF3Q9H4D5 AP001596.2-201ENST00000608410 312 ntBASIC1.95□□□□□ -2.1
NXF3Q9H4D5 AC015540.1-201ENST00000615828 501 ntBASIC1.95□□□□□ -2.1
NXF3Q9H4D5 SDR42E1P4-201ENST00000620894 481 ntBASIC1.95□□□□□ -2.1
NXF3Q9H4D5 AC124864.2-201ENST00000624736 186 ntBASIC1.95□□□□□ -2.1
NXF3Q9H4D5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
NXF3Q9H4D5 SNORA16.1-201ENST00000364597 132 ntBASIC1.94□□□□□ -2.1
NXF3Q9H4D5 RNU6-116P-201ENST00000384042 109 ntBASIC1.94□□□□□ -2.1
NXF3Q9H4D5 MIR578-201ENST00000384828 96 ntBASIC1.94□□□□□ -2.1
NXF3Q9H4D5 MIR218-1-201ENST00000384999 110 ntBASIC1.94□□□□□ -2.1
NXF3Q9H4D5 MIR518D-201ENST00000385014 87 ntBASIC1.94□□□□□ -2.1
NXF3Q9H4D5 RNU2-29P-201ENST00000410423 189 ntBASIC1.94□□□□□ -2.1
NXF3Q9H4D5 RNA5SP270-201ENST00000411361 118 ntBASIC1.94□□□□□ -2.1
NXF3Q9H4D5 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.94□□□□□ -2.1
NXF3Q9H4D5 AL353193.1-201ENST00000421444 268 ntBASIC1.94□□□□□ -2.1
NXF3Q9H4D5 AL358453.1-201ENST00000422522 250 ntBASIC1.94□□□□□ -2.1
NXF3Q9H4D5 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.94□□□□□ -2.1
NXF3Q9H4D5 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.94□□□□□ -2.1
NXF3Q9H4D5 AL603825.1-201ENST00000438481 80 ntBASIC1.94□□□□□ -2.1
NXF3Q9H4D5 AL360271.2-201ENST00000447710 161 ntBASIC1.94□□□□□ -2.1
NXF3Q9H4D5 MTND1P18-201ENST00000448191 573 ntBASIC1.94□□□□□ -2.1
NXF3Q9H4D5 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.94□□□□□ -2.1
NXF3Q9H4D5 AC006512.1-201ENST00000468816 291 ntBASIC1.94□□□□□ -2.1
NXF3Q9H4D5 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.94□□□□□ -2.1
NXF3Q9H4D5 AC091435.1-201ENST00000505442 584 ntBASIC1.94□□□□□ -2.1
NXF3Q9H4D5 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.94□□□□□ -2.1
NXF3Q9H4D5 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.94□□□□□ -2.1
NXF3Q9H4D5 AP005435.4-201ENST00000529514 284 ntBASIC1.94□□□□□ -2.1
NXF3Q9H4D5 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.94□□□□□ -2.1
NXF3Q9H4D5 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.94□□□□□ -2.1
NXF3Q9H4D5 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC1.94□□□□□ -2.1
NXF3Q9H4D5 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.94□□□□□ -2.1
NXF3Q9H4D5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.94□□□□□ -2.1
NXF3Q9H4D5 MIR3683-201ENST00000580847 82 ntBASIC1.94□□□□□ -2.1
NXF3Q9H4D5 AC078899.2-201ENST00000595282 212 ntBASIC1.94□□□□□ -2.1
NXF3Q9H4D5 AC012507.3-201ENST00000603556 477 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms