Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 CR383656.8-201ENST00000549046 145 ntBASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 U1.23-201ENST00000610293 146 ntBASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 AC009318.2-201ENST00000610917 651 ntBASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 RNU1-68P-201ENST00000615382 146 ntBASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 U1.39-201ENST00000621562 146 ntBASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
AMBRA1Q9C0C7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 RNU6-1280P-201ENST00000365211 107 ntBASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 MIR568-201ENST00000385036 95 ntBASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 MIR625-201ENST00000385047 85 ntBASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 U3.19-201ENST00000390893 196 ntBASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 RNU6-700P-201ENST00000391043 107 ntBASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 BTF3L4P2-201ENST00000392798 346 ntBASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 RNU6-101P-201ENST00000410323 104 ntBASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 BPY2DP-201ENST00000422208 265 ntBASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 SETP5-201ENST00000437270 562 ntBASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 snoU13.28-201ENST00000459235 104 ntBASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 MTATP8P1-201ENST00000467115 207 ntBASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 AL049830.2-201ENST00000480072 201 ntBASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 AC144568.1-201ENST00000520139 137 ntBASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 AC021739.1-201ENST00000559631 174 ntBASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 AC113195.1-201ENST00000579952 141 ntBASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 AC016727.2-201ENST00000603988 621 ntBASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 AC002076.2-201ENST00000617362 122 ntBASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 AC073308.1-201ENST00000623696 305 ntBASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 AC008669.1-201ENST00000565823 2178 ntBASIC3.17□□□□□ -1.9
AMBRA1Q9C0C7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 AC091152.2-201ENST00000591628 2569 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 Y_RNA.123-201ENST00000363338 102 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 RNU1-100P-201ENST00000365255 165 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 RNU6-196P-201ENST00000384315 107 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 RNU6-823P-201ENST00000391042 103 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 U3.26-201ENST00000391236 204 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 MIR548F4-201ENST00000408515 105 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 AP000275.1-201ENST00000411943 390 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 AC007098.1-201ENST00000420122 367 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 ARF4P2-201ENST00000430209 526 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 IPO7P1-201ENST00000442031 636 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 HMGN2P10-201ENST00000448085 265 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 CHEK2P4-201ENST00000450340 246 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 AC079354.2-201ENST00000453523 154 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 AC112492.4-201ENST00000456549 352 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 U3.44-201ENST00000458938 192 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 RN7SL330P-201ENST00000469709 307 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 MTCO2P24-201ENST00000515611 426 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 SNORA40.14-201ENST00000516543 86 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 AL391261.3-201ENST00000557194 520 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 AC004584.2-201ENST00000570407 410 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 MIR1244-1-201ENST00000612829 85 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 AL138825.1-201ENST00000618587 192 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 XIST_intron.1-201ENST00000619444 68 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 AC073476.4-201ENST00000628409 72 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 MIR3651-201ENST00000630427 90 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 MIR1244-3-201ENST00000635744 85 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 MIR4272-201ENST00000635924 64 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 MIR1244-2-201ENST00000636449 85 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 MIR1244-4-202ENST00000636813 85 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 ZNF72P-201ENST00000425869 1908 ntBASIC3.16□□□□□ -1.9
AMBRA1Q9C0C7 AC017071.1-201ENST00000564407 2204 ntBASIC3.15□□□□□ -1.9
AMBRA1Q9C0C7 RNY3P11-201ENST00000364153 102 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 SNORA38.1-201ENST00000364172 131 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 RNU4-42P-201ENST00000364738 142 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 RNA5SP267-201ENST00000364893 126 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 SNORD14.1-201ENST00000365609 90 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 SNORD116-20-201ENST00000384529 92 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 RNA5SP494-201ENST00000410653 129 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 RNU6-1245P-201ENST00000411130 106 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 AC074117.2-201ENST00000417130 397 ntBASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
AMBRA1Q9C0C7 AC092423.1-201ENST00000430165 186 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 205 ms