Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 BTF3L4P2-201ENST00000392798 346 ntBASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 AL591416.1-201ENST00000404015 867 ntBASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 AL357139.1-201ENST00000407792 426 ntBASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 MIR1294-201ENST00000408503 142 ntBASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 POLHP1-201ENST00000411806 470 ntBASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 DPH3P2-201ENST00000422618 250 ntBASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 AL669831.1-202ENST00000428504 417 ntBASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 GTF2IP13-201ENST00000438487 386 ntBASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 AL353752.1-201ENST00000454946 260 ntBASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 AL356010.1-201ENST00000456364 102 ntBASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 MTCO3P7-201ENST00000510008 774 ntBASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 AC107222.1-201ENST00000510899 637 ntBASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 AC010486.3-201ENST00000511602 785 ntBASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 AC010493.1-201ENST00000513479 292 ntBASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 AP005435.4-201ENST00000529514 284 ntBASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 AC008147.4-201ENST00000617570 1204 ntBASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CHMP4AQ9BY43 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 AL359851.1-201ENST00000569460 4997 ntBASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 RNU6-142P-201ENST00000384019 107 ntBASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 SNORA70B-201ENST00000384210 135 ntBASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 SNORA8-201ENST00000384574 139 ntBASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 AC096920.1-201ENST00000423991 241 ntBASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 UBE2V1P4-201ENST00000425374 344 ntBASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 IFNA20P-201ENST00000436840 528 ntBASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 MTND4P32-201ENST00000437189 1237 ntBASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 USP9YP8-201ENST00000441913 500 ntBASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 RN7SL429P-201ENST00000479090 223 ntBASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 RN7SL489P-201ENST00000486185 223 ntBASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 RN7SL327P-201ENST00000488659 223 ntBASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 AC008549.1-201ENST00000512900 643 ntBASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 MTCO3P23-201ENST00000561363 289 ntBASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 AC008749.1-201ENST00000597650 306 ntBASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 AC013412.1-201ENST00000610687 192 ntBASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 RN7SL853P-201ENST00000617250 223 ntBASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 ELL2P3-201ENST00000457883 1602 ntBASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 CENPCP1-201ENST00000533085 2578 ntBASIC2.92□□□□□ -1.94
CHMP4AQ9BY43 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 snoU2_19.1-201ENST00000362361 80 ntBASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 RNU6-1120P-201ENST00000362988 108 ntBASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 RNU6-1285P-201ENST00000363480 105 ntBASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 MIR1-2-201ENST00000384961 85 ntBASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 Y_RNA.597-201ENST00000410463 100 ntBASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 RPS15AP28-201ENST00000435088 386 ntBASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 MTND2P4-201ENST00000445034 1004 ntBASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 PRPS1P1-201ENST00000445305 876 ntBASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 AL353705.4-201ENST00000449661 238 ntBASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 FDX1P2-201ENST00000450769 375 ntBASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 AC013470.1-201ENST00000453438 462 ntBASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 AL162395.1-201ENST00000457882 422 ntBASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 AC090255.1-201ENST00000495779 349 ntBASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 MTCO2P4-201ENST00000517968 247 ntBASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 AP005639.2-201ENST00000527592 928 ntBASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 MIR3945-201ENST00000581853 98 ntBASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 AC025811.1-201ENST00000604312 472 ntBASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 Z69908.1-201ENST00000622603 247 ntBASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
CHMP4AQ9BY43 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CHMP4AQ9BY43 RNU1-58P-201ENST00000362413 163 ntBASIC2.9□□□□□ -1.95
CHMP4AQ9BY43 RNU6-181P-201ENST00000363225 107 ntBASIC2.9□□□□□ -1.95
CHMP4AQ9BY43 RNU6-944P-201ENST00000364023 107 ntBASIC2.9□□□□□ -1.95
CHMP4AQ9BY43 RNU6-282P-201ENST00000365357 103 ntBASIC2.9□□□□□ -1.95
CHMP4AQ9BY43 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
CHMP4AQ9BY43 Y_RNA.399-201ENST00000383955 105 ntBASIC2.9□□□□□ -1.95
CHMP4AQ9BY43 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
CHMP4AQ9BY43 SNORA3.2-201ENST00000408221 125 ntBASIC2.9□□□□□ -1.95
CHMP4AQ9BY43 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.9□□□□□ -1.95
CHMP4AQ9BY43 Z98742.3-201ENST00000418637 326 ntBASIC2.9□□□□□ -1.95
CHMP4AQ9BY43 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms