Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 Y_RNA.60-201ENST00000362831 98 ntBASIC0.22□□□□□ -2.37
SCAPERQ9BY12 RNU6-252P-201ENST00000363232 107 ntBASIC0.22□□□□□ -2.37
SCAPERQ9BY12 RNU6-743P-201ENST00000364151 106 ntBASIC0.22□□□□□ -2.37
SCAPERQ9BY12 AL669831.1-202ENST00000428504 417 ntBASIC0.22□□□□□ -2.37
SCAPERQ9BY12 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.22□□□□□ -2.37
SCAPERQ9BY12 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.22□□□□□ -2.37
SCAPERQ9BY12 OR6C5P-201ENST00000452388 923 ntBASIC0.22□□□□□ -2.37
SCAPERQ9BY12 AC130509.1-201ENST00000464158 433 ntBASIC0.22□□□□□ -2.37
SCAPERQ9BY12 AC074344.1-201ENST00000512823 224 ntBASIC0.22□□□□□ -2.37
SCAPERQ9BY12 RNU6-927P-201ENST00000516199 100 ntBASIC0.22□□□□□ -2.37
SCAPERQ9BY12 AP001893.2-201ENST00000526949 202 ntBASIC0.22□□□□□ -2.37
SCAPERQ9BY12 AC018630.3-201ENST00000542637 96 ntBASIC0.22□□□□□ -2.37
SCAPERQ9BY12 MIR5094-201ENST00000578766 85 ntBASIC0.22□□□□□ -2.37
SCAPERQ9BY12 uc_338.15-201ENST00000615470 191 ntBASIC0.22□□□□□ -2.37
SCAPERQ9BY12 AL596245.1-201ENST00000618994 362 ntBASIC0.22□□□□□ -2.37
SCAPERQ9BY12 AC009269.6-201ENST00000621778 588 ntBASIC0.22□□□□□ -2.37
SCAPERQ9BY12 U6.101-201ENST00000637707 76 ntBASIC0.22□□□□□ -2.37
SCAPERQ9BY12 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
SCAPERQ9BY12 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.22□□□□□ -2.37
SCAPERQ9BY12 AL391994.1-201ENST00000254724 282 ntBASIC0.21□□□□□ -2.38
SCAPERQ9BY12 TAF13P2-201ENST00000416876 286 ntBASIC0.21□□□□□ -2.38
SCAPERQ9BY12 MTATP6P27-201ENST00000416987 621 ntBASIC0.21□□□□□ -2.38
SCAPERQ9BY12 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.21□□□□□ -2.38
SCAPERQ9BY12 RNU6-965P-201ENST00000516721 96 ntBASIC0.21□□□□□ -2.38
SCAPERQ9BY12 RNU6-1183P-201ENST00000517054 60 ntBASIC0.21□□□□□ -2.38
SCAPERQ9BY12 AC087897.1-201ENST00000550134 156 ntBASIC0.21□□□□□ -2.38
SCAPERQ9BY12 AC073410.2-201ENST00000603240 332 ntBASIC0.21□□□□□ -2.38
SCAPERQ9BY12 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.21□□□□□ -2.38
SCAPERQ9BY12 RNU4-12P-201ENST00000365233 139 ntBASIC0.21□□□□□ -2.38
SCAPERQ9BY12 MIR520A-201ENST00000384862 85 ntBASIC0.21□□□□□ -2.38
SCAPERQ9BY12 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.21□□□□□ -2.38
SCAPERQ9BY12 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.21□□□□□ -2.38
SCAPERQ9BY12 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.21□□□□□ -2.38
SCAPERQ9BY12 AC063976.4-201ENST00000421971 163 ntBASIC0.21□□□□□ -2.38
SCAPERQ9BY12 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC0.21□□□□□ -2.38
SCAPERQ9BY12 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.21□□□□□ -2.38
SCAPERQ9BY12 AC010631.1-201ENST00000474150 156 ntBASIC0.21□□□□□ -2.38
SCAPERQ9BY12 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.21□□□□□ -2.38
SCAPERQ9BY12 HMGB1P33-201ENST00000563485 527 ntBASIC0.21□□□□□ -2.38
SCAPERQ9BY12 AC091489.2-201ENST00000566263 604 ntBASIC0.21□□□□□ -2.38
SCAPERQ9BY12 AC068790.6-201ENST00000602558 258 ntBASIC0.21□□□□□ -2.38
SCAPERQ9BY12 AP001596.2-201ENST00000608410 312 ntBASIC0.21□□□□□ -2.38
SCAPERQ9BY12 AC130324.3-201ENST00000614165 542 ntBASIC0.21□□□□□ -2.38
SCAPERQ9BY12 AC018926.1-201ENST00000616335 435 ntBASIC0.21□□□□□ -2.38
SCAPERQ9BY12 AL590240.4-201ENST00000616908 390 ntBASIC0.21□□□□□ -2.38
SCAPERQ9BY12 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.21□□□□□ -2.38
SCAPERQ9BY12 AC106858.1-201ENST00000637497 429 ntBASIC0.21□□□□□ -2.38
SCAPERQ9BY12 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.2□□□□□ -2.38
SCAPERQ9BY12 RNU6-1167P-201ENST00000363227 94 ntBASIC0.2□□□□□ -2.38
SCAPERQ9BY12 SNORD114-6-201ENST00000364393 72 ntBASIC0.2□□□□□ -2.38
SCAPERQ9BY12 RNU6-637P-201ENST00000384050 107 ntBASIC0.2□□□□□ -2.38
SCAPERQ9BY12 MIR194-1-201ENST00000384892 85 ntBASIC0.2□□□□□ -2.38
SCAPERQ9BY12 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
SCAPERQ9BY12 RNU2-28P-201ENST00000410457 189 ntBASIC0.2□□□□□ -2.38
SCAPERQ9BY12 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.2□□□□□ -2.38
SCAPERQ9BY12 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.2□□□□□ -2.38
SCAPERQ9BY12 GPM6BP2-201ENST00000432046 144 ntBASIC0.2□□□□□ -2.38
SCAPERQ9BY12 RPL36AP53-201ENST00000432891 316 ntBASIC0.2□□□□□ -2.38
SCAPERQ9BY12 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.2□□□□□ -2.38
SCAPERQ9BY12 AC002429.1-201ENST00000437672 148 ntBASIC0.2□□□□□ -2.38
SCAPERQ9BY12 RPEP5-201ENST00000441137 268 ntBASIC0.2□□□□□ -2.38
SCAPERQ9BY12 GPM6BP1-201ENST00000446387 144 ntBASIC0.2□□□□□ -2.38
SCAPERQ9BY12 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.2□□□□□ -2.38
SCAPERQ9BY12 AL353997.4-201ENST00000586196 166 ntBASIC0.2□□□□□ -2.38
SCAPERQ9BY12 AC024060.1-201ENST00000607052 494 ntBASIC0.2□□□□□ -2.38
SCAPERQ9BY12 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.2□□□□□ -2.38
SCAPERQ9BY12 AC123767.1-202ENST00000620407 817 ntBASIC0.2□□□□□ -2.38
SCAPERQ9BY12 DBF4P1-201ENST00000412976 1892 ntBASIC0.19□□□□□ -2.38
SCAPERQ9BY12 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
SCAPERQ9BY12 Y_RNA.124-201ENST00000363339 93 ntBASIC0.19□□□□□ -2.38
SCAPERQ9BY12 RNU6-944P-201ENST00000364023 107 ntBASIC0.19□□□□□ -2.38
SCAPERQ9BY12 SNORD12-201ENST00000391002 90 ntBASIC0.19□□□□□ -2.38
SCAPERQ9BY12 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC0.19□□□□□ -2.38
SCAPERQ9BY12 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.19□□□□□ -2.38
SCAPERQ9BY12 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.19□□□□□ -2.38
SCAPERQ9BY12 VN1R10P-201ENST00000447106 875 ntBASIC0.19□□□□□ -2.38
SCAPERQ9BY12 AC013828.1-201ENST00000481845 158 ntBASIC0.19□□□□□ -2.38
SCAPERQ9BY12 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC0.19□□□□□ -2.38
SCAPERQ9BY12 AC005741.1-201ENST00000511094 432 ntBASIC0.19□□□□□ -2.38
SCAPERQ9BY12 RNU5A-4P-201ENST00000516588 111 ntBASIC0.19□□□□□ -2.38
SCAPERQ9BY12 RN7SKP256-201ENST00000517201 314 ntBASIC0.19□□□□□ -2.38
SCAPERQ9BY12 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.19□□□□□ -2.38
SCAPERQ9BY12 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.19□□□□□ -2.38
SCAPERQ9BY12 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.19□□□□□ -2.38
SCAPERQ9BY12 AL121579.1-201ENST00000555129 305 ntBASIC0.19□□□□□ -2.38
SCAPERQ9BY12 MIR5589-201ENST00000579442 60 ntBASIC0.19□□□□□ -2.38
SCAPERQ9BY12 MTND4P14-201ENST00000435799 1354 ntBASIC0.18□□□□□ -2.38
SCAPERQ9BY12 RNU6-529P-201ENST00000363383 104 ntBASIC0.18□□□□□ -2.38
SCAPERQ9BY12 RNU6-657P-201ENST00000383904 107 ntBASIC0.18□□□□□ -2.38
SCAPERQ9BY12 MIR186-201ENST00000384988 86 ntBASIC0.18□□□□□ -2.38
SCAPERQ9BY12 MIR548B-201ENST00000385247 97 ntBASIC0.18□□□□□ -2.38
SCAPERQ9BY12 RPL21P24-201ENST00000413752 448 ntBASIC0.18□□□□□ -2.38
SCAPERQ9BY12 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.18□□□□□ -2.38
SCAPERQ9BY12 RAC1P8-201ENST00000427086 527 ntBASIC0.18□□□□□ -2.38
SCAPERQ9BY12 MTCO2P25-201ENST00000447065 681 ntBASIC0.18□□□□□ -2.38
SCAPERQ9BY12 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.18□□□□□ -2.38
SCAPERQ9BY12 AC067940.1-201ENST00000458411 300 ntBASIC0.18□□□□□ -2.38
SCAPERQ9BY12 AC098869.1-201ENST00000481627 292 ntBASIC0.18□□□□□ -2.38
SCAPERQ9BY12 RNA5SP135-201ENST00000517019 125 ntBASIC0.18□□□□□ -2.38
SCAPERQ9BY12 MIR4802-201ENST00000581881 80 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms