Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 MTCYBP4-201ENST00000401524 249 ntBASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 AC074117.2-201ENST00000417130 397 ntBASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 MTND4P28-201ENST00000426217 387 ntBASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 MTND3P9-201ENST00000429526 346 ntBASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 UBE2V1P7-201ENST00000446395 340 ntBASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 UQCRHP3-201ENST00000451503 251 ntBASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 RAC1P5-201ENST00000512182 576 ntBASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 RNU6-612P-201ENST00000516909 102 ntBASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 Y_RNA.708-201ENST00000516950 96 ntBASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 SNORA31.18-201ENST00000517043 134 ntBASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 AC019159.1-201ENST00000605094 187 ntBASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 MIR3976-201ENST00000606807 139 ntBASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 AL133215.3-201ENST00000609801 448 ntBASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 AC084781.2-201ENST00000615568 161 ntBASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 AC126177.8-201ENST00000618339 1015 ntBASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 UCA1.1-201ENST00000620952 75 ntBASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 AC092628.2-201ENST00000622492 339 ntBASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 AC090574.1-201ENST00000623186 233 ntBASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.01□□□□□ -1.93
PAAF1Q9BRP4 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3□□□□□ -1.93
PAAF1Q9BRP4 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3□□□□□ -1.93
PAAF1Q9BRP4 Y_RNA.2-201ENST00000362330 96 ntBASIC3□□□□□ -1.93
PAAF1Q9BRP4 RNU1-35P-201ENST00000362782 153 ntBASIC3□□□□□ -1.93
PAAF1Q9BRP4 Y_RNA.460-201ENST00000384255 102 ntBASIC3□□□□□ -1.93
PAAF1Q9BRP4 RNU6-748P-201ENST00000384648 107 ntBASIC3□□□□□ -1.93
PAAF1Q9BRP4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3□□□□□ -1.93
PAAF1Q9BRP4 AL138827.1-201ENST00000402666 306 ntBASIC3□□□□□ -1.93
PAAF1Q9BRP4 USP9YP30-201ENST00000430729 455 ntBASIC3□□□□□ -1.93
PAAF1Q9BRP4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3□□□□□ -1.93
PAAF1Q9BRP4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3□□□□□ -1.93
PAAF1Q9BRP4 RN7SL75P-201ENST00000461926 281 ntBASIC3□□□□□ -1.93
PAAF1Q9BRP4 SNRPGP7-201ENST00000469016 106 ntBASIC3□□□□□ -1.93
PAAF1Q9BRP4 MTND4LP22-201ENST00000508209 276 ntBASIC3□□□□□ -1.93
PAAF1Q9BRP4 AP005902.1-201ENST00000521358 186 ntBASIC3□□□□□ -1.93
PAAF1Q9BRP4 IGHV3-76-201ENST00000522465 295 ntBASIC3□□□□□ -1.93
PAAF1Q9BRP4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3□□□□□ -1.93
PAAF1Q9BRP4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3□□□□□ -1.93
PAAF1Q9BRP4 GLYCAM1-201ENST00000546596 285 ntBASIC3□□□□□ -1.93
PAAF1Q9BRP4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3□□□□□ -1.93
PAAF1Q9BRP4 MIR4298-201ENST00000584380 73 ntBASIC3□□□□□ -1.93
PAAF1Q9BRP4 AC018462.2-201ENST00000605375 395 ntBASIC3□□□□□ -1.93
PAAF1Q9BRP4 AC099778.2-201ENST00000610904 211 ntBASIC3□□□□□ -1.93
PAAF1Q9BRP4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3□□□□□ -1.93
PAAF1Q9BRP4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3□□□□□ -1.93
PAAF1Q9BRP4 AC092593.1-201ENST00000515413 1815 ntBASIC3□□□□□ -1.93
PAAF1Q9BRP4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 MIR148B-201ENST00000362252 99 ntBASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 Y_RNA.431-201ENST00000384086 102 ntBASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 Y_RNA.473-201ENST00000384333 102 ntBASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 RPS29P13-201ENST00000402041 169 ntBASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 AL133475.1-201ENST00000404414 305 ntBASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 Y_RNA.594-201ENST00000410373 140 ntBASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 RNU6-1050P-201ENST00000410388 107 ntBASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 AC063976.3-201ENST00000426849 329 ntBASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 AC009414.1-201ENST00000427200 443 ntBASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 DAP3P1-201ENST00000441522 278 ntBASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 RPL30P15-201ENST00000457129 321 ntBASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 Y_RNA.653-201ENST00000459091 95 ntBASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 SNORD19B-201ENST00000459623 84 ntBASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 RN7SKP43-201ENST00000516173 320 ntBASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 AC093331.1-201ENST00000521474 169 ntBASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 APOOP3-201ENST00000536787 586 ntBASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 MIR4273-201ENST00000582824 84 ntBASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 BNIP3P16-201ENST00000589779 534 ntBASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 AC005046.1-201ENST00000608515 625 ntBASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 AC107294.3-201ENST00000609211 526 ntBASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 AC133104.2-201ENST00000615272 193 ntBASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 AC138627.2-201ENST00000624202 601 ntBASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
PAAF1Q9BRP4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 RBBP8P1-201ENST00000449447 1844 ntBASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 RNU6-843P-201ENST00000384454 104 ntBASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 SNORA75.4-201ENST00000391278 119 ntBASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 BTF3L4P2-201ENST00000392798 346 ntBASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 RPS20P15-201ENST00000412792 311 ntBASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 AC138623.1-201ENST00000418060 216 ntBASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 ATG3P1-201ENST00000419507 911 ntBASIC2.98□□□□□ -1.93
PAAF1Q9BRP4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms