Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AC009541.1-201ENST00000438279 2662 ntBASIC0.32□□□□□ -2.36
VPS25Q9BRG1 RNU4-79P-201ENST00000362764 141 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 SNORD3E-201ENST00000362899 217 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 SNORD114-27-201ENST00000363766 70 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 RNU6-853P-201ENST00000364306 107 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 Y_RNA.363-201ENST00000365529 113 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
VPS25Q9BRG1 RNA5SP213-201ENST00000391031 106 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 SNORA12.2-201ENST00000391040 156 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 BX664727.1-201ENST00000416024 466 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 RPS3AP37-201ENST00000419176 745 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.31□□□□□ -2.36
VPS25Q9BRG1 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.31□□□□□ -2.36
VPS25Q9BRG1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.31□□□□□ -2.36
VPS25Q9BRG1 FO393414.1-201ENST00000428697 1184 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 MTND4P6-201ENST00000438297 472 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 AC073910.1-201ENST00000445047 438 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 ART2BP-201ENST00000453501 499 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 AC098869.1-201ENST00000481627 292 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 AC005840.1-201ENST00000498412 377 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.31□□□□□ -2.36
VPS25Q9BRG1 AC024589.1-201ENST00000512207 263 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 RNU1-41P-201ENST00000516161 162 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 RNU1-48P-201ENST00000516400 162 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 RN7SKP265-201ENST00000516448 223 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
VPS25Q9BRG1 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.31□□□□□ -2.36
VPS25Q9BRG1 AC133485.1-201ENST00000567176 124 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 AC138907.6-201ENST00000568401 126 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 AL158827.2-201ENST00000602494 330 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 AC231657.1-201ENST00000624313 397 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 AL691447.3-201ENST00000635020 330 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 ELL2P3-201ENST00000457883 1602 ntBASIC0.31□□□□□ -2.36
VPS25Q9BRG1 AC018630.2-201ENST00000534866 2403 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 RNU6-17P-201ENST00000384245 107 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 RNU6-18P-201ENST00000384527 107 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 Y_RNA.534-201ENST00000384599 112 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.3□□□□□ -2.36
VPS25Q9BRG1 MIR942-201ENST00000401111 86 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 RNA5SP111-201ENST00000411386 101 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 AC083875.1-201ENST00000419509 405 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 AC123900.1-201ENST00000420390 96 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 AC011233.1-201ENST00000422812 283 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 USP9YP14-201ENST00000430663 563 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.3□□□□□ -2.36
VPS25Q9BRG1 AL122001.1-201ENST00000457027 370 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 RPS26P45-201ENST00000471748 340 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 ATP5EP1-201ENST00000510257 156 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.3□□□□□ -2.36
VPS25Q9BRG1 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.3□□□□□ -2.36
VPS25Q9BRG1 SNORA31.4-201ENST00000516049 129 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 RNU6-113P-201ENST00000516653 101 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 SNORD60.2-201ENST00000516883 86 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 RNU6-1315P-201ENST00000517187 99 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 MTND1P36-201ENST00000522384 936 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 AC004812.1-201ENST00000540773 146 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC0.3□□□□□ -2.36
VPS25Q9BRG1 AC091489.2-201ENST00000566263 604 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC0.3□□□□□ -2.36
VPS25Q9BRG1 VN1R82P-201ENST00000601481 356 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 RNU6-87P-201ENST00000607561 108 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 AC083806.3-201ENST00000614016 455 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 AL159153.1-201ENST00000619688 317 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.3□□□□□ -2.36
VPS25Q9BRG1 AL133216.2-202ENST00000634512 349 ntBASIC0.3□□□□□ -2.36
VPS25Q9BRG1 RNU6-1335P-201ENST00000365426 107 ntBASIC0.29□□□□□ -2.36
VPS25Q9BRG1 RNU6-969P-201ENST00000383900 105 ntBASIC0.29□□□□□ -2.36
VPS25Q9BRG1 RNU6-945P-201ENST00000383947 107 ntBASIC0.29□□□□□ -2.36
VPS25Q9BRG1 RNU6-883P-201ENST00000384597 107 ntBASIC0.29□□□□□ -2.36
VPS25Q9BRG1 MTCO1P56-201ENST00000401674 224 ntBASIC0.29□□□□□ -2.36
VPS25Q9BRG1 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.29□□□□□ -2.36
VPS25Q9BRG1 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.29□□□□□ -2.36
VPS25Q9BRG1 LARP1BP3-201ENST00000437229 869 ntBASIC0.29□□□□□ -2.36
VPS25Q9BRG1 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.29□□□□□ -2.36
VPS25Q9BRG1 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.29□□□□□ -2.36
VPS25Q9BRG1 EEF1E1P1-201ENST00000446998 430 ntBASIC0.29□□□□□ -2.36
VPS25Q9BRG1 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC0.29□□□□□ -2.36
VPS25Q9BRG1 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC0.29□□□□□ -2.36
VPS25Q9BRG1 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.29□□□□□ -2.36
VPS25Q9BRG1 AC104563.1-201ENST00000476147 376 ntBASIC0.29□□□□□ -2.36
VPS25Q9BRG1 AC002350.1-201ENST00000490759 375 ntBASIC0.29□□□□□ -2.36
VPS25Q9BRG1 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
VPS25Q9BRG1 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.29□□□□□ -2.36
VPS25Q9BRG1 RNA5SP255-201ENST00000516370 107 ntBASIC0.29□□□□□ -2.36
VPS25Q9BRG1 SUMO2P16-201ENST00000519475 264 ntBASIC0.29□□□□□ -2.36
VPS25Q9BRG1 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.29□□□□□ -2.36
VPS25Q9BRG1 AL157871.3-201ENST00000557231 293 ntBASIC0.29□□□□□ -2.36
VPS25Q9BRG1 MIR5708-201ENST00000579723 85 ntBASIC0.29□□□□□ -2.36
VPS25Q9BRG1 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.29□□□□□ -2.36
VPS25Q9BRG1 BNIP3P8-201ENST00000597863 560 ntBASIC0.29□□□□□ -2.36
VPS25Q9BRG1 OR4H6P-202ENST00000603819 340 ntBASIC0.29□□□□□ -2.36
VPS25Q9BRG1 AC105148.1-201ENST00000604961 409 ntBASIC0.29□□□□□ -2.36
VPS25Q9BRG1 AL353765.1-201ENST00000605514 183 ntBASIC0.29□□□□□ -2.36
VPS25Q9BRG1 AC026741.1-201ENST00000605892 482 ntBASIC0.29□□□□□ -2.36
VPS25Q9BRG1 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
VPS25Q9BRG1 AC126177.8-201ENST00000618339 1015 ntBASIC0.29□□□□□ -2.36
VPS25Q9BRG1 AP000676.3-201ENST00000623299 569 ntBASIC0.29□□□□□ -2.36
VPS25Q9BRG1 RNU5B-1-201ENST00000363286 116 ntBASIC0.28□□□□□ -2.36
VPS25Q9BRG1 RNU6-72P-201ENST00000384285 79 ntBASIC0.28□□□□□ -2.36
VPS25Q9BRG1 RNU6-1176P-201ENST00000390955 107 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms