Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 RNU6-1083P-201ENST00000384022 107 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 Y_RNA.481-201ENST00000384373 102 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 MIR10A-201ENST00000385043 110 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
EBF4Q9BQW3 RNU6-220P-201ENST00000390919 107 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 AL133475.1-201ENST00000404414 305 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 RNU6-387P-201ENST00000411331 105 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 AL139156.1-201ENST00000412785 841 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.99□□□□□ -2.09
EBF4Q9BQW3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC1.99□□□□□ -2.09
EBF4Q9BQW3 Z98742.2-201ENST00000431564 187 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 RNU7-26P-201ENST00000458980 63 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 RPS27P21-201ENST00000486977 252 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 AC018710.1-201ENST00000506509 158 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 PRDX4P1-201ENST00000507189 574 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.99□□□□□ -2.09
EBF4Q9BQW3 MTND3P25-201ENST00000509243 135 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 RNA5SP503-201ENST00000517047 117 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.99□□□□□ -2.09
EBF4Q9BQW3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.99□□□□□ -2.09
EBF4Q9BQW3 AC023050.3-201ENST00000541142 333 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 AL121579.1-201ENST00000555129 305 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 LARP7P3-201ENST00000579888 337 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.99□□□□□ -2.09
EBF4Q9BQW3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.99□□□□□ -2.09
EBF4Q9BQW3 AC060780.3-201ENST00000589464 80 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 CTHRC1P1-201ENST00000605383 469 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
EBF4Q9BQW3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.99□□□□□ -2.09
EBF4Q9BQW3 HMGB1P24-202ENST00000615653 685 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 AC022306.2-201ENST00000617563 647 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 AC092794.2-201ENST00000620933 563 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
EBF4Q9BQW3 AC005858.4-201ENST00000623191 700 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 AC012640.5-201ENST00000623897 319 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 AC090617.10-201ENST00000624308 134 ntBASIC1.99□□□□□ -2.09
EBF4Q9BQW3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.99□□□□□ -2.09
EBF4Q9BQW3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
EBF4Q9BQW3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
EBF4Q9BQW3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
EBF4Q9BQW3 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 SNORA72.1-201ENST00000363485 129 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 Y_RNA.378-201ENST00000365652 113 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 MIR491-201ENST00000384877 84 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 MIR218-1-201ENST00000384999 110 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 SUMO2P12-201ENST00000405924 140 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 AL356776.1-201ENST00000406574 447 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.98□□□□□ -2.09
EBF4Q9BQW3 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.98□□□□□ -2.09
EBF4Q9BQW3 AL139413.1-201ENST00000421309 217 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.98□□□□□ -2.09
EBF4Q9BQW3 AC027124.2-201ENST00000428249 105 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 AL627311.1-201ENST00000431514 115 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.98□□□□□ -2.09
EBF4Q9BQW3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.98□□□□□ -2.09
EBF4Q9BQW3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.98□□□□□ -2.09
EBF4Q9BQW3 SEPT14P3-201ENST00000439401 183 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 AL732372.2-207ENST00000445840 183 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.98□□□□□ -2.09
EBF4Q9BQW3 NDUFB1P2-201ENST00000449477 176 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.98□□□□□ -2.09
EBF4Q9BQW3 SEPT14P2-201ENST00000453405 183 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 SEPT14P4-201ENST00000513445 186 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 AC105417.1-201ENST00000514691 285 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 SNORA25.11-201ENST00000515935 105 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 SNORA20.3-201ENST00000516880 132 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.98□□□□□ -2.09
EBF4Q9BQW3 FO082796.1-201ENST00000523795 183 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.98□□□□□ -2.09
EBF4Q9BQW3 AF235103.2-201ENST00000525753 346 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.98□□□□□ -2.09
EBF4Q9BQW3 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.98□□□□□ -2.09
EBF4Q9BQW3 MIR3199-1-201ENST00000582434 88 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 AL138889.2-201ENST00000603883 242 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 APOOP1-201ENST00000604695 592 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 RNU6-89P-201ENST00000606519 100 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.98□□□□□ -2.09
EBF4Q9BQW3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.98□□□□□ -2.09
EBF4Q9BQW3 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 U6.114-201ENST00000636407 96 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 AC100810.6-201ENST00000638068 285 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.98□□□□□ -2.09
EBF4Q9BQW3 OR4G1P-203ENST00000641984 1631 ntBASIC1.98□□□□□ -2.09
EBF4Q9BQW3 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
EBF4Q9BQW3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
EBF4Q9BQW3 AL359851.1-201ENST00000569460 4997 ntBASIC1.97□□□□□ -2.09
EBF4Q9BQW3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
EBF4Q9BQW3 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.97□□□□□ -2.09
EBF4Q9BQW3 RNU6-1287P-201ENST00000362914 107 ntBASIC1.97□□□□□ -2.09
EBF4Q9BQW3 RNU6-942P-201ENST00000363002 107 ntBASIC1.97□□□□□ -2.09
EBF4Q9BQW3 Y_RNA.160-201ENST00000363677 92 ntBASIC1.97□□□□□ -2.09
EBF4Q9BQW3 RNU6-522P-201ENST00000364497 107 ntBASIC1.97□□□□□ -2.09
EBF4Q9BQW3 RNU6-1303P-201ENST00000364841 107 ntBASIC1.97□□□□□ -2.09
EBF4Q9BQW3 RNU6-72P-201ENST00000384285 79 ntBASIC1.97□□□□□ -2.09
EBF4Q9BQW3 RNU6-1060P-201ENST00000384664 107 ntBASIC1.97□□□□□ -2.09
EBF4Q9BQW3 MIR147B-201ENST00000390185 80 ntBASIC1.97□□□□□ -2.09
EBF4Q9BQW3 FGF7P8-201ENST00000402994 292 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms