Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC090572.1-201ENST00000519251 160 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 AC087883.1-201ENST00000551882 391 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.87□□□□□ -2.11
NPAS2Q99743 MIR5692A1-201ENST00000580523 69 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 MIR3682-201ENST00000581338 84 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 AL670379.2-201ENST00000604983 252 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 AL670379.4-201ENST00000605279 254 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 AC006566.1-201ENST00000608943 513 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 RMST_4.1-201ENST00000616886 107 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 AC098657.3-201ENST00000620434 263 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 AC138649.3-201ENST00000622154 254 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 AC091932.3-201ENST00000624223 323 ntBASIC1.87□□□□□ -2.11
NPAS2Q99743 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.87□□□□□ -2.11
NPAS2Q99743 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
NPAS2Q99743 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.87□□□□□ -2.11
NPAS2Q99743 ZNF355P-201ENST00000427301 3216 ntBASIC1.86□□□□□ -2.11
NPAS2Q99743 RNU6-371P-201ENST00000364283 108 ntBASIC1.86□□□□□ -2.11
NPAS2Q99743 RNU6-282P-201ENST00000365357 103 ntBASIC1.86□□□□□ -2.11
NPAS2Q99743 RNU6-1274P-201ENST00000384557 107 ntBASIC1.86□□□□□ -2.11
NPAS2Q99743 Y_RNA.553-201ENST00000384670 102 ntBASIC1.86□□□□□ -2.11
NPAS2Q99743 U8.13-201ENST00000390842 128 ntBASIC1.86□□□□□ -2.11
NPAS2Q99743 RNU2-20P-201ENST00000410425 191 ntBASIC1.86□□□□□ -2.11
NPAS2Q99743 RNU2-48P-201ENST00000410694 191 ntBASIC1.86□□□□□ -2.11
NPAS2Q99743 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.86□□□□□ -2.11
NPAS2Q99743 HMGN2P19-201ENST00000425149 265 ntBASIC1.86□□□□□ -2.11
NPAS2Q99743 MTATP6P16-201ENST00000434543 526 ntBASIC1.86□□□□□ -2.11
NPAS2Q99743 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.86□□□□□ -2.11
NPAS2Q99743 MTND2P22-201ENST00000444325 1033 ntBASIC1.86□□□□□ -2.11
NPAS2Q99743 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.86□□□□□ -2.11
NPAS2Q99743 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.86□□□□□ -2.11
NPAS2Q99743 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.86□□□□□ -2.11
NPAS2Q99743 AC010424.1-201ENST00000506336 297 ntBASIC1.86□□□□□ -2.11
NPAS2Q99743 RBBP4P6-201ENST00000508098 202 ntBASIC1.86□□□□□ -2.11
NPAS2Q99743 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.86□□□□□ -2.11
NPAS2Q99743 MTCO3P28-201ENST00000513351 515 ntBASIC1.86□□□□□ -2.11
NPAS2Q99743 RNU6-685P-201ENST00000517088 95 ntBASIC1.86□□□□□ -2.11
NPAS2Q99743 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.86□□□□□ -2.11
NPAS2Q99743 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.86□□□□□ -2.11
NPAS2Q99743 CYCSP27-201ENST00000527643 293 ntBASIC1.86□□□□□ -2.11
NPAS2Q99743 AC018630.3-201ENST00000542637 96 ntBASIC1.86□□□□□ -2.11
NPAS2Q99743 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.86□□□□□ -2.11
NPAS2Q99743 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.86□□□□□ -2.11
NPAS2Q99743 RSL24D1P11-201ENST00000591045 491 ntBASIC1.86□□□□□ -2.11
NPAS2Q99743 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.86□□□□□ -2.11
NPAS2Q99743 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.86□□□□□ -2.11
NPAS2Q99743 AC007792.1-201ENST00000623023 402 ntBASIC1.86□□□□□ -2.11
NPAS2Q99743 AC090517.3-201ENST00000625170 141 ntBASIC1.86□□□□□ -2.11
NPAS2Q99743 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.86□□□□□ -2.11
NPAS2Q99743 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
NPAS2Q99743 AC009487.4-201ENST00000624969 3585 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 AC002543.1-201ENST00000299783 1954 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 Y_RNA.40-201ENST00000362645 93 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 RNU6-179P-201ENST00000363350 107 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 RNU6-546P-201ENST00000383991 107 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 SNORA75-201ENST00000384158 137 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 SNORD116-1-201ENST00000384335 95 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 MIR29B2-201ENST00000385055 81 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 RNU6-482P-201ENST00000391068 107 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 RNU2-32P-201ENST00000411193 191 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 OR9R1P-201ENST00000412200 877 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 MTND3P17-201ENST00000416968 344 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 EIF1AXP1-201ENST00000419267 435 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 CALM2P2-201ENST00000428512 440 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC1.85□□□□□ -2.11
NPAS2Q99743 AL358934.1-201ENST00000432346 324 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 KATNBL1P3-201ENST00000443475 909 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 AL360221.1-201ENST00000445989 335 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 AC079448.1-201ENST00000449377 373 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.85□□□□□ -2.11
NPAS2Q99743 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.85□□□□□ -2.11
NPAS2Q99743 AC116337.1-201ENST00000509680 687 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.85□□□□□ -2.11
NPAS2Q99743 BNIP3P6-201ENST00000549284 499 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.85□□□□□ -2.11
NPAS2Q99743 AC006362.1-201ENST00000567392 174 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 MIR4528-201ENST00000577763 90 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 MIR4299-201ENST00000577899 72 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 AC087752.4-201ENST00000605911 462 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 AL359314.1-201ENST00000616913 261 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.85□□□□□ -2.11
NPAS2Q99743 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
NPAS2Q99743 CENPCP1-201ENST00000533085 2578 ntBASIC1.84□□□□□ -2.11
NPAS2Q99743 RNA5SP276-201ENST00000362580 94 ntBASIC1.84□□□□□ -2.11
NPAS2Q99743 Y_RNA.77-201ENST00000362962 107 ntBASIC1.84□□□□□ -2.11
NPAS2Q99743 Y_RNA.359-201ENST00000365498 102 ntBASIC1.84□□□□□ -2.11
NPAS2Q99743 Y_RNA.367-201ENST00000365544 101 ntBASIC1.84□□□□□ -2.11
NPAS2Q99743 RNA5SP465-201ENST00000391195 109 ntBASIC1.84□□□□□ -2.11
NPAS2Q99743 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.84□□□□□ -2.11
NPAS2Q99743 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.84□□□□□ -2.11
NPAS2Q99743 RNA5SP111-201ENST00000411386 101 ntBASIC1.84□□□□□ -2.11
NPAS2Q99743 AL030996.1-201ENST00000411430 235 ntBASIC1.84□□□□□ -2.11
NPAS2Q99743 BTF3L4P1-201ENST00000413813 468 ntBASIC1.84□□□□□ -2.11
NPAS2Q99743 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.84□□□□□ -2.11
NPAS2Q99743 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.84□□□□□ -2.11
NPAS2Q99743 MTCO2P34-201ENST00000421994 607 ntBASIC1.84□□□□□ -2.11
NPAS2Q99743 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.84□□□□□ -2.11
NPAS2Q99743 AL136380.1-201ENST00000447970 162 ntBASIC1.84□□□□□ -2.11
NPAS2Q99743 AC245102.2-201ENST00000448956 180 ntBASIC1.84□□□□□ -2.11
NPAS2Q99743 RPL31P3-201ENST00000458430 332 ntBASIC1.84□□□□□ -2.11
NPAS2Q99743 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms