Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.96□□□□□ -1.94
SIN3AQ96ST3 RNU7-66P-201ENST00000459469 62 ntBASIC2.96□□□□□ -1.94
SIN3AQ96ST3 AC117503.1-201ENST00000472241 394 ntBASIC2.96□□□□□ -1.94
SIN3AQ96ST3 FAM206BP-201ENST00000510179 541 ntBASIC2.96□□□□□ -1.94
SIN3AQ96ST3 SNORA14.1-201ENST00000516113 141 ntBASIC2.96□□□□□ -1.94
SIN3AQ96ST3 Z82243.1-201ENST00000609432 473 ntBASIC2.96□□□□□ -1.94
SIN3AQ96ST3 AL136221.1-201ENST00000621449 509 ntBASIC2.96□□□□□ -1.94
SIN3AQ96ST3 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.96□□□□□ -1.94
SIN3AQ96ST3 FO624990.1-201ENST00000636373 85 ntBASIC2.96□□□□□ -1.94
SIN3AQ96ST3 AC110491.1-201ENST00000562191 2010 ntBASIC2.95□□□□□ -1.94
SIN3AQ96ST3 Y_RNA.373-201ENST00000365600 103 ntBASIC2.95□□□□□ -1.94
SIN3AQ96ST3 RNY3P14-201ENST00000384309 102 ntBASIC2.95□□□□□ -1.94
SIN3AQ96ST3 Y_RNA.480-201ENST00000384364 102 ntBASIC2.95□□□□□ -1.94
SIN3AQ96ST3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.95□□□□□ -1.94
SIN3AQ96ST3 AC138393.2-201ENST00000414742 246 ntBASIC2.95□□□□□ -1.94
SIN3AQ96ST3 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.95□□□□□ -1.94
SIN3AQ96ST3 AC016831.2-201ENST00000417179 352 ntBASIC2.95□□□□□ -1.94
SIN3AQ96ST3 HMGN2P10-201ENST00000448085 265 ntBASIC2.95□□□□□ -1.94
SIN3AQ96ST3 AL021397.1-201ENST00000451806 248 ntBASIC2.95□□□□□ -1.94
SIN3AQ96ST3 SNORA20.3-201ENST00000516880 132 ntBASIC2.95□□□□□ -1.94
SIN3AQ96ST3 RNU6-1314P-201ENST00000517139 104 ntBASIC2.95□□□□□ -1.94
SIN3AQ96ST3 AC118273.2-201ENST00000532092 465 ntBASIC2.95□□□□□ -1.94
SIN3AQ96ST3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.95□□□□□ -1.94
SIN3AQ96ST3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SIN3AQ96ST3 AL161629.2-201ENST00000615347 275 ntBASIC2.95□□□□□ -1.94
SIN3AQ96ST3 MIR6134-201ENST00000617606 109 ntBASIC2.95□□□□□ -1.94
SIN3AQ96ST3 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.94□□□□□ -1.94
SIN3AQ96ST3 Y_RNA.160-201ENST00000363677 92 ntBASIC2.94□□□□□ -1.94
SIN3AQ96ST3 Y_RNA.324-201ENST00000365165 102 ntBASIC2.94□□□□□ -1.94
SIN3AQ96ST3 RNU6-898P-201ENST00000365627 104 ntBASIC2.94□□□□□ -1.94
SIN3AQ96ST3 PGBD4P6-201ENST00000421501 610 ntBASIC2.94□□□□□ -1.94
SIN3AQ96ST3 OOSP1P1-201ENST00000423265 274 ntBASIC2.94□□□□□ -1.94
SIN3AQ96ST3 AL513185.2-201ENST00000425543 193 ntBASIC2.94□□□□□ -1.94
SIN3AQ96ST3 RPS15AP5-201ENST00000436276 388 ntBASIC2.94□□□□□ -1.94
SIN3AQ96ST3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.94□□□□□ -1.94
SIN3AQ96ST3 MTATP6P23-201ENST00000440153 476 ntBASIC2.94□□□□□ -1.94
SIN3AQ96ST3 AC007547.1-201ENST00000462177 490 ntBASIC2.94□□□□□ -1.94
SIN3AQ96ST3 RNU6-1069P-201ENST00000516612 133 ntBASIC2.94□□□□□ -1.94
SIN3AQ96ST3 AC134698.4-201ENST00000523451 826 ntBASIC2.94□□□□□ -1.94
SIN3AQ96ST3 NACAP3-201ENST00000552100 481 ntBASIC2.94□□□□□ -1.94
SIN3AQ96ST3 PSMA3P-201ENST00000555485 635 ntBASIC2.94□□□□□ -1.94
SIN3AQ96ST3 AC021739.1-201ENST00000559631 174 ntBASIC2.94□□□□□ -1.94
SIN3AQ96ST3 LINC00933-203ENST00000559812 219 ntBASIC2.94□□□□□ -1.94
SIN3AQ96ST3 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.94□□□□□ -1.94
SIN3AQ96ST3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.94□□□□□ -1.94
SIN3AQ96ST3 AC021646.1-201ENST00000605469 484 ntBASIC2.94□□□□□ -1.94
SIN3AQ96ST3 AL121757.2-201ENST00000611223 313 ntBASIC2.94□□□□□ -1.94
SIN3AQ96ST3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.94□□□□□ -1.94
SIN3AQ96ST3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.94□□□□□ -1.94
SIN3AQ96ST3 AP000553.5-201ENST00000641933 54 ntBASIC2.94□□□□□ -1.94
SIN3AQ96ST3 AC091564.4-201ENST00000533934 2194 ntBASIC2.93□□□□□ -1.94
SIN3AQ96ST3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.93□□□□□ -1.94
SIN3AQ96ST3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.93□□□□□ -1.94
SIN3AQ96ST3 BTF3P12-201ENST00000519620 469 ntBASIC2.93□□□□□ -1.94
SIN3AQ96ST3 CYCSP27-201ENST00000527643 293 ntBASIC2.93□□□□□ -1.94
SIN3AQ96ST3 MIR3941-201ENST00000582572 103 ntBASIC2.93□□□□□ -1.94
SIN3AQ96ST3 MIR5692C1-201ENST00000585309 91 ntBASIC2.93□□□□□ -1.94
SIN3AQ96ST3 NUTF2P8-201ENST00000604593 363 ntBASIC2.93□□□□□ -1.94
SIN3AQ96ST3 AC123912.5-201ENST00000605470 343 ntBASIC2.93□□□□□ -1.94
SIN3AQ96ST3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.93□□□□□ -1.94
SIN3AQ96ST3 AC009033.1-201ENST00000624279 431 ntBASIC2.93□□□□□ -1.94
SIN3AQ96ST3 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.93□□□□□ -1.94
SIN3AQ96ST3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SIN3AQ96ST3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.92□□□□□ -1.94
SIN3AQ96ST3 CDC27P3-201ENST00000635418 1910 ntBASIC2.92□□□□□ -1.94
SIN3AQ96ST3 Y_RNA.100-201ENST00000363141 102 ntBASIC2.92□□□□□ -1.94
SIN3AQ96ST3 Y_RNA.279-201ENST00000364763 95 ntBASIC2.92□□□□□ -1.94
SIN3AQ96ST3 RNU1-109P-201ENST00000383960 147 ntBASIC2.92□□□□□ -1.94
SIN3AQ96ST3 RNU6-72P-201ENST00000384285 79 ntBASIC2.92□□□□□ -1.94
SIN3AQ96ST3 Y_RNA.530-201ENST00000384587 101 ntBASIC2.92□□□□□ -1.94
SIN3AQ96ST3 EIF4E2P1-201ENST00000393781 255 ntBASIC2.92□□□□□ -1.94
SIN3AQ96ST3 MTND4LP11-201ENST00000422184 280 ntBASIC2.92□□□□□ -1.94
SIN3AQ96ST3 RPL23AP58-201ENST00000440453 469 ntBASIC2.92□□□□□ -1.94
SIN3AQ96ST3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.92□□□□□ -1.94
SIN3AQ96ST3 AC233279.1-201ENST00000455300 423 ntBASIC2.92□□□□□ -1.94
SIN3AQ96ST3 snoU109.2-201ENST00000459316 135 ntBASIC2.92□□□□□ -1.94
SIN3AQ96ST3 SNORA19.2-201ENST00000516013 114 ntBASIC2.92□□□□□ -1.94
SIN3AQ96ST3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.92□□□□□ -1.94
SIN3AQ96ST3 AC022634.1-201ENST00000520765 532 ntBASIC2.92□□□□□ -1.94
SIN3AQ96ST3 AC107953.1-201ENST00000522216 297 ntBASIC2.92□□□□□ -1.94
SIN3AQ96ST3 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.92□□□□□ -1.94
SIN3AQ96ST3 DNAJC8P1-201ENST00000554535 372 ntBASIC2.92□□□□□ -1.94
SIN3AQ96ST3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.92□□□□□ -1.94
SIN3AQ96ST3 RPS3AP23-202ENST00000574601 686 ntBASIC2.92□□□□□ -1.94
SIN3AQ96ST3 MIR548S-201ENST00000581352 82 ntBASIC2.92□□□□□ -1.94
SIN3AQ96ST3 APOOP1-201ENST00000604695 592 ntBASIC2.92□□□□□ -1.94
SIN3AQ96ST3 AC087045.1-201ENST00000605856 382 ntBASIC2.92□□□□□ -1.94
SIN3AQ96ST3 AC004852.3-201ENST00000614131 326 ntBASIC2.92□□□□□ -1.94
SIN3AQ96ST3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.92□□□□□ -1.94
SIN3AQ96ST3 FAM157A-202ENST00000615155 405 ntBASIC2.92□□□□□ -1.94
SIN3AQ96ST3 Y_RNA.72-201ENST00000362894 103 ntBASIC2.91□□□□□ -1.94
SIN3AQ96ST3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.91□□□□□ -1.94
SIN3AQ96ST3 RNU6-799P-201ENST00000363567 107 ntBASIC2.91□□□□□ -1.94
SIN3AQ96ST3 RNU2-49P-201ENST00000410666 184 ntBASIC2.91□□□□□ -1.94
SIN3AQ96ST3 RN7SKP192-201ENST00000411291 327 ntBASIC2.91□□□□□ -1.94
SIN3AQ96ST3 RPL21P111-201ENST00000418453 477 ntBASIC2.91□□□□□ -1.94
SIN3AQ96ST3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.91□□□□□ -1.94
SIN3AQ96ST3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SIN3AQ96ST3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.91□□□□□ -1.94
SIN3AQ96ST3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 128.7 ms