Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC097372.5-201ENST00000623665 376 ntBASIC3.08□□□□□ -1.92
SNX18Q96RF0 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.08□□□□□ -1.92
SNX18Q96RF0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
SNX18Q96RF0 AC091812.1-201ENST00000432235 1948 ntBASIC3.08□□□□□ -1.92
SNX18Q96RF0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SNX18Q96RF0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SNX18Q96RF0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
SNX18Q96RF0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SNX18Q96RF0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.08□□□□□ -1.92
SNX18Q96RF0 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SNX18Q96RF0 MTND5P9-201ENST00000503854 1755 ntBASIC3.07□□□□□ -1.92
SNX18Q96RF0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
SNX18Q96RF0 Y_RNA.39-201ENST00000362620 98 ntBASIC3.07□□□□□ -1.92
SNX18Q96RF0 Y_RNA.389-201ENST00000383924 113 ntBASIC3.07□□□□□ -1.92
SNX18Q96RF0 Y_RNA.577-201ENST00000384794 101 ntBASIC3.07□□□□□ -1.92
SNX18Q96RF0 RNA5SP38-201ENST00000410750 119 ntBASIC3.07□□□□□ -1.92
SNX18Q96RF0 BPY2DP-201ENST00000422208 265 ntBASIC3.07□□□□□ -1.92
SNX18Q96RF0 AC096644.2-201ENST00000429278 159 ntBASIC3.07□□□□□ -1.92
SNX18Q96RF0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.07□□□□□ -1.92
SNX18Q96RF0 AC010099.1-201ENST00000455434 375 ntBASIC3.07□□□□□ -1.92
SNX18Q96RF0 AC114801.2-201ENST00000503825 781 ntBASIC3.07□□□□□ -1.92
SNX18Q96RF0 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.07□□□□□ -1.92
SNX18Q96RF0 SNORA43.2-201ENST00000516652 128 ntBASIC3.07□□□□□ -1.92
SNX18Q96RF0 SNORA70.24-201ENST00000517233 118 ntBASIC3.07□□□□□ -1.92
SNX18Q96RF0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.07□□□□□ -1.92
SNX18Q96RF0 AP000867.2-201ENST00000532468 320 ntBASIC3.07□□□□□ -1.92
SNX18Q96RF0 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.07□□□□□ -1.92
SNX18Q96RF0 GNAI2P1-201ENST00000541815 315 ntBASIC3.07□□□□□ -1.92
SNX18Q96RF0 AL117187.1-201ENST00000555482 181 ntBASIC3.07□□□□□ -1.92
SNX18Q96RF0 HMGN2P15-201ENST00000585707 270 ntBASIC3.07□□□□□ -1.92
SNX18Q96RF0 MIR1244-1-201ENST00000612829 85 ntBASIC3.07□□□□□ -1.92
SNX18Q96RF0 AL138880.2-201ENST00000616214 239 ntBASIC3.07□□□□□ -1.92
SNX18Q96RF0 AL606534.2-204ENST00000635008 178 ntBASIC3.07□□□□□ -1.92
SNX18Q96RF0 MIR1244-3-201ENST00000635744 85 ntBASIC3.07□□□□□ -1.92
SNX18Q96RF0 MIR1244-2-201ENST00000636449 85 ntBASIC3.07□□□□□ -1.92
SNX18Q96RF0 MIR1244-4-202ENST00000636813 85 ntBASIC3.07□□□□□ -1.92
SNX18Q96RF0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SNX18Q96RF0 AC110491.1-201ENST00000562191 2010 ntBASIC3.07□□□□□ -1.92
SNX18Q96RF0 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.07□□□□□ -1.92
SNX18Q96RF0 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
SNX18Q96RF0 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.06□□□□□ -1.92
SNX18Q96RF0 RNU6-527P-201ENST00000363425 104 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 RNA5SP50-201ENST00000363731 107 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 RNU6-450P-201ENST00000364654 107 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 Y_RNA.455-201ENST00000384230 98 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 RNU6-463P-201ENST00000384340 107 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 Y_RNA.557-201ENST00000384680 107 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 RPS29P13-201ENST00000402041 169 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 AL138885.1-201ENST00000405921 675 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 ZNF299P-201ENST00000406845 1804 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 EIF4EP2-201ENST00000422816 654 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 ZNF72P-201ENST00000425869 1908 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.06□□□□□ -1.92
SNX18Q96RF0 AC005300.1-201ENST00000428401 373 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 CYCSP32-201ENST00000440548 321 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 MTND5P1-201ENST00000445440 1375 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 CHEK2P4-201ENST00000450340 246 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 RBMY2UP-201ENST00000453474 324 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 ADAM3A-203ENST00000461344 2157 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 RPS29P27-201ENST00000463711 170 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 RPL23AP49-201ENST00000492925 468 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 SNORA70.18-201ENST00000516696 98 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 AP000889.1-201ENST00000530968 660 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 HSBP1P1-201ENST00000555205 166 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 AC008269.2-201ENST00000561915 1105 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.06□□□□□ -1.92
SNX18Q96RF0 AC024153.1-201ENST00000603103 365 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.06□□□□□ -1.92
SNX18Q96RF0 7SK.10-201ENST00000621414 298 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 AC006111.3-201ENST00000622137 383 ntBASIC3.06□□□□□ -1.92
SNX18Q96RF0 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.06□□□□□ -1.92
SNX18Q96RF0 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.06□□□□□ -1.92
SNX18Q96RF0 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.05□□□□□ -1.92
SNX18Q96RF0 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.05□□□□□ -1.92
SNX18Q96RF0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SNX18Q96RF0 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.05□□□□□ -1.92
SNX18Q96RF0 RNU6-227P-201ENST00000362865 103 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 SNORD50.1-201ENST00000362987 71 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 RNU6-942P-201ENST00000363002 107 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 Y_RNA.123-201ENST00000363338 102 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 RNU6-525P-201ENST00000363685 104 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 RNU6-105P-201ENST00000363909 104 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 RNU6-1280P-201ENST00000365211 107 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 RNU1-100P-201ENST00000365255 165 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 RNU6-26P-201ENST00000383985 107 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 RNVU1-14-201ENST00000384770 164 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 MIR548F4-201ENST00000408515 105 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 HMGB3P2-201ENST00000411913 584 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 DBIP2-201ENST00000419076 262 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.05□□□□□ -1.92
SNX18Q96RF0 HMGN2P20-201ENST00000437531 273 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX18Q96RF0 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.05□□□□□ -1.92
SNX18Q96RF0 HMGN2P10-201ENST00000448085 265 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 RN7SL75P-201ENST00000461926 281 ntBASIC3.05□□□□□ -1.92
SNX18Q96RF0 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX18Q96RF0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX18Q96RF0 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX18Q96RF0 RNU6-581P-201ENST00000516214 105 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms