Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RNU6-482P-201ENST00000391068 107 ntBASIC0.46□□□□□ -2.34
AP1S3Q96PC3 RAP1BP3-201ENST00000407180 549 ntBASIC0.46□□□□□ -2.34
AP1S3Q96PC3 RNU2-7P-201ENST00000410794 178 ntBASIC0.46□□□□□ -2.34
AP1S3Q96PC3 CYCSP33-201ENST00000414485 327 ntBASIC0.46□□□□□ -2.34
AP1S3Q96PC3 AC092809.3-201ENST00000415453 231 ntBASIC0.46□□□□□ -2.34
AP1S3Q96PC3 RPS26P5-201ENST00000418544 335 ntBASIC0.46□□□□□ -2.34
AP1S3Q96PC3 MTCYBP5-201ENST00000423752 1135 ntBASIC0.46□□□□□ -2.34
AP1S3Q96PC3 AL591704.1-201ENST00000432574 275 ntBASIC0.46□□□□□ -2.34
AP1S3Q96PC3 GTF2IP13-201ENST00000438487 386 ntBASIC0.46□□□□□ -2.34
AP1S3Q96PC3 AC244505.5-201ENST00000443639 207 ntBASIC0.46□□□□□ -2.34
AP1S3Q96PC3 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.46□□□□□ -2.34
AP1S3Q96PC3 AC012308.1-201ENST00000451232 178 ntBASIC0.46□□□□□ -2.34
AP1S3Q96PC3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.46□□□□□ -2.34
AP1S3Q96PC3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.46□□□□□ -2.34
AP1S3Q96PC3 RN7SKP49-201ENST00000516675 260 ntBASIC0.46□□□□□ -2.34
AP1S3Q96PC3 RNU6-914P-201ENST00000516749 109 ntBASIC0.46□□□□□ -2.34
AP1S3Q96PC3 RNA5SP490-201ENST00000517141 136 ntBASIC0.46□□□□□ -2.34
AP1S3Q96PC3 SNORA70.22-201ENST00000517160 124 ntBASIC0.46□□□□□ -2.34
AP1S3Q96PC3 OR8K2P-201ENST00000524645 927 ntBASIC0.46□□□□□ -2.34
AP1S3Q96PC3 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.46□□□□□ -2.34
AP1S3Q96PC3 AL136520.1-202ENST00000555494 763 ntBASIC0.46□□□□□ -2.34
AP1S3Q96PC3 AL157871.3-201ENST00000557231 293 ntBASIC0.46□□□□□ -2.34
AP1S3Q96PC3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.46□□□□□ -2.34
AP1S3Q96PC3 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC0.46□□□□□ -2.34
AP1S3Q96PC3 AC069545.1-201ENST00000605671 358 ntBASIC0.46□□□□□ -2.34
AP1S3Q96PC3 AC090186.1-201ENST00000605991 572 ntBASIC0.46□□□□□ -2.34
AP1S3Q96PC3 MIR6835-201ENST00000621552 64 ntBASIC0.46□□□□□ -2.34
AP1S3Q96PC3 RNA5SP99-201ENST00000364020 114 ntBASIC0.45□□□□□ -2.34
AP1S3Q96PC3 SNORA63D-201ENST00000364359 132 ntBASIC0.45□□□□□ -2.34
AP1S3Q96PC3 RNU6-392P-201ENST00000364926 101 ntBASIC0.45□□□□□ -2.34
AP1S3Q96PC3 SNORA12.2-201ENST00000391040 156 ntBASIC0.45□□□□□ -2.34
AP1S3Q96PC3 RNU6-817P-201ENST00000391083 104 ntBASIC0.45□□□□□ -2.34
AP1S3Q96PC3 AL603865.2-201ENST00000401679 213 ntBASIC0.45□□□□□ -2.34
AP1S3Q96PC3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.45□□□□□ -2.34
AP1S3Q96PC3 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.45□□□□□ -2.34
AP1S3Q96PC3 RNU6-733P-201ENST00000410759 104 ntBASIC0.45□□□□□ -2.34
AP1S3Q96PC3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.45□□□□□ -2.34
AP1S3Q96PC3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.45□□□□□ -2.34
AP1S3Q96PC3 MRPS36P1-201ENST00000421291 307 ntBASIC0.45□□□□□ -2.34
AP1S3Q96PC3 AL365338.1-201ENST00000422282 858 ntBASIC0.45□□□□□ -2.34
AP1S3Q96PC3 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.45□□□□□ -2.34
AP1S3Q96PC3 RAP1BP2-201ENST00000478270 544 ntBASIC0.45□□□□□ -2.34
AP1S3Q96PC3 MTND1P3-201ENST00000484956 952 ntBASIC0.45□□□□□ -2.34
AP1S3Q96PC3 TRBVA-201ENST00000498804 316 ntBASIC0.45□□□□□ -2.34
AP1S3Q96PC3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.45□□□□□ -2.34
AP1S3Q96PC3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.45□□□□□ -2.34
AP1S3Q96PC3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.45□□□□□ -2.34
AP1S3Q96PC3 MIR3912-201ENST00000577566 105 ntBASIC0.45□□□□□ -2.34
AP1S3Q96PC3 SNORA59B-202ENST00000578183 701 ntBASIC0.45□□□□□ -2.34
AP1S3Q96PC3 MIR1273C-201ENST00000578669 77 ntBASIC0.45□□□□□ -2.34
AP1S3Q96PC3 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.45□□□□□ -2.34
AP1S3Q96PC3 AC022432.1-201ENST00000595739 310 ntBASIC0.45□□□□□ -2.34
AP1S3Q96PC3 AC006270.3-201ENST00000605967 1036 ntBASIC0.45□□□□□ -2.34
AP1S3Q96PC3 snoU13.31-201ENST00000607291 104 ntBASIC0.45□□□□□ -2.34
AP1S3Q96PC3 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.45□□□□□ -2.34
AP1S3Q96PC3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.45□□□□□ -2.34
AP1S3Q96PC3 PCMTD1P7-201ENST00000634506 357 ntBASIC0.45□□□□□ -2.34
AP1S3Q96PC3 MTND5P42-201ENST00000637720 498 ntBASIC0.45□□□□□ -2.34
AP1S3Q96PC3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.45□□□□□ -2.34
AP1S3Q96PC3 Y_RNA.33-201ENST00000362591 102 ntBASIC0.44□□□□□ -2.34
AP1S3Q96PC3 RNU6-862P-201ENST00000362804 105 ntBASIC0.44□□□□□ -2.34
AP1S3Q96PC3 SNORD32B-201ENST00000364460 84 ntBASIC0.44□□□□□ -2.34
AP1S3Q96PC3 SNORA4.2-201ENST00000365313 147 ntBASIC0.44□□□□□ -2.34
AP1S3Q96PC3 MIR301A-201ENST00000385261 86 ntBASIC0.44□□□□□ -2.34
AP1S3Q96PC3 SNRPEP8-201ENST00000442866 260 ntBASIC0.44□□□□□ -2.34
AP1S3Q96PC3 MTCYBP42-201ENST00000444653 1130 ntBASIC0.44□□□□□ -2.34
AP1S3Q96PC3 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.44□□□□□ -2.34
AP1S3Q96PC3 AL122001.1-201ENST00000457027 370 ntBASIC0.44□□□□□ -2.34
AP1S3Q96PC3 COX6CP6-201ENST00000490840 228 ntBASIC0.44□□□□□ -2.34
AP1S3Q96PC3 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC0.44□□□□□ -2.34
AP1S3Q96PC3 MTCO3P28-201ENST00000513351 515 ntBASIC0.44□□□□□ -2.34
AP1S3Q96PC3 RN7SKP265-201ENST00000516448 223 ntBASIC0.44□□□□□ -2.34
AP1S3Q96PC3 RNA5SP168-201ENST00000516642 112 ntBASIC0.44□□□□□ -2.34
AP1S3Q96PC3 RNA5SP481-201ENST00000516814 122 ntBASIC0.44□□□□□ -2.34
AP1S3Q96PC3 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.44□□□□□ -2.34
AP1S3Q96PC3 AL442163.3-201ENST00000554110 156 ntBASIC0.44□□□□□ -2.34
AP1S3Q96PC3 AP000654.2-201ENST00000605633 586 ntBASIC0.44□□□□□ -2.34
AP1S3Q96PC3 MIR3976-201ENST00000606807 139 ntBASIC0.44□□□□□ -2.34
AP1S3Q96PC3 AC022893.3-201ENST00000607665 437 ntBASIC0.44□□□□□ -2.34
AP1S3Q96PC3 AC009229.3-201ENST00000608056 282 ntBASIC0.44□□□□□ -2.34
AP1S3Q96PC3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.44□□□□□ -2.34
AP1S3Q96PC3 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC0.44□□□□□ -2.34
AP1S3Q96PC3 AL133216.2-202ENST00000634512 349 ntBASIC0.44□□□□□ -2.34
AP1S3Q96PC3 AC023934.1-201ENST00000574529 2389 ntBASIC0.43□□□□□ -2.34
AP1S3Q96PC3 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
AP1S3Q96PC3 Y_RNA.124-201ENST00000363339 93 ntBASIC0.43□□□□□ -2.34
AP1S3Q96PC3 SNORD114-27-201ENST00000363766 70 ntBASIC0.43□□□□□ -2.34
AP1S3Q96PC3 SMIM11P1-201ENST00000369586 178 ntBASIC0.43□□□□□ -2.34
AP1S3Q96PC3 MIR508-201ENST00000384857 115 ntBASIC0.43□□□□□ -2.34
AP1S3Q96PC3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
AP1S3Q96PC3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
AP1S3Q96PC3 AL117342.1-201ENST00000404861 406 ntBASIC0.43□□□□□ -2.34
AP1S3Q96PC3 AL357139.1-201ENST00000407792 426 ntBASIC0.43□□□□□ -2.34
AP1S3Q96PC3 RNA5SP390-201ENST00000410191 113 ntBASIC0.43□□□□□ -2.34
AP1S3Q96PC3 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.43□□□□□ -2.34
AP1S3Q96PC3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.43□□□□□ -2.34
AP1S3Q96PC3 AC123900.1-201ENST00000420390 96 ntBASIC0.43□□□□□ -2.34
AP1S3Q96PC3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.43□□□□□ -2.34
AP1S3Q96PC3 AL953862.1-201ENST00000423016 168 ntBASIC0.43□□□□□ -2.34
AP1S3Q96PC3 MTCO2P1-201ENST00000424648 477 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms