Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC100830.2-201ENST00000581636 240 ntBASIC3.24□□□□□ -1.89
SNX27Q96L92 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.24□□□□□ -1.89
SNX27Q96L92 AL670379.10-201ENST00000604330 253 ntBASIC3.24□□□□□ -1.89
SNX27Q96L92 AL670379.9-201ENST00000605428 253 ntBASIC3.24□□□□□ -1.89
SNX27Q96L92 AL627309.6-201ENST00000606857 840 ntBASIC3.24□□□□□ -1.89
SNX27Q96L92 AC007318.2-201ENST00000620999 243 ntBASIC3.24□□□□□ -1.89
SNX27Q96L92 TPTEP1-208ENST00000636884 213 ntBASIC3.24□□□□□ -1.89
SNX27Q96L92 AL355596.1-201ENST00000565399 3996 ntBASIC3.24□□□□□ -1.89
SNX27Q96L92 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
SNX27Q96L92 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SNX27Q96L92 AC093010.3-201ENST00000570269 15214 ntBASIC3.23□□□□□ -1.89
SNX27Q96L92 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SNX27Q96L92 RNU6-858P-201ENST00000362436 107 ntBASIC3.23□□□□□ -1.89
SNX27Q96L92 Y_RNA.140-201ENST00000363474 103 ntBASIC3.23□□□□□ -1.89
SNX27Q96L92 SNORA51.4-201ENST00000364993 124 ntBASIC3.23□□□□□ -1.89
SNX27Q96L92 RNU6-1329P-201ENST00000365664 107 ntBASIC3.23□□□□□ -1.89
SNX27Q96L92 MIR767-201ENST00000390228 109 ntBASIC3.23□□□□□ -1.89
SNX27Q96L92 RNA5SP354-201ENST00000391247 136 ntBASIC3.23□□□□□ -1.89
SNX27Q96L92 RPL21P3-201ENST00000395517 478 ntBASIC3.23□□□□□ -1.89
SNX27Q96L92 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.23□□□□□ -1.89
SNX27Q96L92 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.23□□□□□ -1.89
SNX27Q96L92 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.23□□□□□ -1.89
SNX27Q96L92 RPL7P37-201ENST00000425095 738 ntBASIC3.23□□□□□ -1.89
SNX27Q96L92 AMD1P1-201ENST00000457220 922 ntBASIC3.23□□□□□ -1.89
SNX27Q96L92 AC006026.2-201ENST00000457376 180 ntBASIC3.23□□□□□ -1.89
SNX27Q96L92 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.23□□□□□ -1.89
SNX27Q96L92 RNA5SP454-201ENST00000517231 127 ntBASIC3.23□□□□□ -1.89
SNX27Q96L92 AC109479.2-201ENST00000517842 174 ntBASIC3.23□□□□□ -1.89
SNX27Q96L92 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.23□□□□□ -1.89
SNX27Q96L92 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.23□□□□□ -1.89
SNX27Q96L92 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.23□□□□□ -1.89
SNX27Q96L92 AP000787.2-201ENST00000604432 568 ntBASIC3.23□□□□□ -1.89
SNX27Q96L92 ELOCP5-201ENST00000604924 333 ntBASIC3.23□□□□□ -1.89
SNX27Q96L92 LARP7P1-201ENST00000605576 316 ntBASIC3.23□□□□□ -1.89
SNX27Q96L92 AC104237.2-201ENST00000612456 443 ntBASIC3.23□□□□□ -1.89
SNX27Q96L92 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.23□□□□□ -1.89
SNX27Q96L92 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.23□□□□□ -1.89
SNX27Q96L92 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
SNX27Q96L92 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SNX27Q96L92 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SNX27Q96L92 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SNX27Q96L92 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
SNX27Q96L92 RNU6-78P-201ENST00000362897 107 ntBASIC3.22□□□□□ -1.89
SNX27Q96L92 RNU6-942P-201ENST00000363002 107 ntBASIC3.22□□□□□ -1.89
SNX27Q96L92 Y_RNA.135-201ENST00000363439 95 ntBASIC3.22□□□□□ -1.89
SNX27Q96L92 Y_RNA.263-201ENST00000364659 114 ntBASIC3.22□□□□□ -1.89
SNX27Q96L92 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SNX27Q96L92 FTH1P15-201ENST00000406984 280 ntBASIC3.22□□□□□ -1.89
SNX27Q96L92 UBE2V1P4-201ENST00000425374 344 ntBASIC3.22□□□□□ -1.89
SNX27Q96L92 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.22□□□□□ -1.89
SNX27Q96L92 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.22□□□□□ -1.89
SNX27Q96L92 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.22□□□□□ -1.89
SNX27Q96L92 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SNX27Q96L92 MTND1P11-201ENST00000456661 876 ntBASIC3.22□□□□□ -1.89
SNX27Q96L92 RPS27P26-201ENST00000494583 239 ntBASIC3.22□□□□□ -1.89
SNX27Q96L92 RNU6-377P-201ENST00000515965 102 ntBASIC3.22□□□□□ -1.89
SNX27Q96L92 SNORA43.2-201ENST00000516652 128 ntBASIC3.22□□□□□ -1.89
SNX27Q96L92 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.22□□□□□ -1.89
SNX27Q96L92 COPS8P3-201ENST00000526024 482 ntBASIC3.22□□□□□ -1.89
SNX27Q96L92 MIR4790-201ENST00000577799 79 ntBASIC3.22□□□□□ -1.89
SNX27Q96L92 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.22□□□□□ -1.89
SNX27Q96L92 AC064836.2-201ENST00000609491 462 ntBASIC3.22□□□□□ -1.89
SNX27Q96L92 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.22□□□□□ -1.89
SNX27Q96L92 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
SNX27Q96L92 ZNF519P1-201ENST00000449011 1626 ntBASIC3.22□□□□□ -1.89
SNX27Q96L92 WWP1P1-201ENST00000466609 2769 ntBASIC3.22□□□□□ -1.89
SNX27Q96L92 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
SNX27Q96L92 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
SNX27Q96L92 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SNX27Q96L92 AC010889.1-201ENST00000566193 2666 ntBASIC3.21□□□□□ -1.9
SNX27Q96L92 Y_RNA.112-201ENST00000363250 102 ntBASIC3.21□□□□□ -1.9
SNX27Q96L92 U3.6-201ENST00000363622 211 ntBASIC3.21□□□□□ -1.9
SNX27Q96L92 Y_RNA.356-201ENST00000365475 113 ntBASIC3.21□□□□□ -1.9
SNX27Q96L92 RNU6-827P-201ENST00000365553 106 ntBASIC3.21□□□□□ -1.9
SNX27Q96L92 RNU6-1106P-201ENST00000390845 107 ntBASIC3.21□□□□□ -1.9
SNX27Q96L92 RNU6-750P-201ENST00000390946 107 ntBASIC3.21□□□□□ -1.9
SNX27Q96L92 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.21□□□□□ -1.9
SNX27Q96L92 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.21□□□□□ -1.9
SNX27Q96L92 AL590632.1-201ENST00000424289 371 ntBASIC3.21□□□□□ -1.9
SNX27Q96L92 Z98742.2-201ENST00000431564 187 ntBASIC3.21□□□□□ -1.9
SNX27Q96L92 SNAP23P1-201ENST00000433229 246 ntBASIC3.21□□□□□ -1.9
SNX27Q96L92 AL135938.1-201ENST00000443141 297 ntBASIC3.21□□□□□ -1.9
SNX27Q96L92 MRPL42P6-201ENST00000486397 371 ntBASIC3.21□□□□□ -1.9
SNX27Q96L92 AC096745.1-201ENST00000509945 370 ntBASIC3.21□□□□□ -1.9
SNX27Q96L92 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.21□□□□□ -1.9
SNX27Q96L92 AC105029.1-201ENST00000520250 669 ntBASIC3.21□□□□□ -1.9
SNX27Q96L92 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.21□□□□□ -1.9
SNX27Q96L92 AC024153.1-201ENST00000603103 365 ntBASIC3.21□□□□□ -1.9
SNX27Q96L92 AL121917.1-203ENST00000605534 577 ntBASIC3.21□□□□□ -1.9
SNX27Q96L92 AC090617.7-201ENST00000623952 126 ntBASIC3.21□□□□□ -1.9
SNX27Q96L92 AC099654.5-201ENST00000636479 350 ntBASIC3.21□□□□□ -1.9
SNX27Q96L92 U4.7-201ENST00000638126 106 ntBASIC3.21□□□□□ -1.9
SNX27Q96L92 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
SNX27Q96L92 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
SNX27Q96L92 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.21□□□□□ -1.9
SNX27Q96L92 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.21□□□□□ -1.9
SNX27Q96L92 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SNX27Q96L92 AL109809.4-201ENST00000603520 2185 ntBASIC3.2□□□□□ -1.9
SNX27Q96L92 MIR337-201ENST00000362281 93 ntBASIC3.2□□□□□ -1.9
SNX27Q96L92 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms