Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
TRIM41Q8WV44 RNA5SP120-201ENST00000410900 112 ntBASIC6.82□□□□□ -1.32
TRIM41Q8WV44 Y_RNA.641-201ENST00000459414 105 ntBASIC6.82□□□□□ -1.32
TRIM41Q8WV44 AC091874.1-201ENST00000511402 339 ntBASIC6.82□□□□□ -1.32
TRIM41Q8WV44 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC6.82□□□□□ -1.32
TRIM41Q8WV44 MIR4782-201ENST00000577987 79 ntBASIC6.82□□□□□ -1.32
TRIM41Q8WV44 AC027309.3-201ENST00000623419 351 ntBASIC6.82□□□□□ -1.32
TRIM41Q8WV44 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC6.82□□□□□ -1.32
TRIM41Q8WV44 snoU18.1-201ENST00000629629 71 ntBASIC6.82□□□□□ -1.32
TRIM41Q8WV44 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM41Q8WV44 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
TRIM41Q8WV44 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
TRIM41Q8WV44 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM41Q8WV44 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
TRIM41Q8WV44 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
TRIM41Q8WV44 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
TRIM41Q8WV44 RNU6-653P-201ENST00000363074 106 ntBASIC6.81□□□□□ -1.32
TRIM41Q8WV44 SNORD35B-201ENST00000363660 87 ntBASIC6.81□□□□□ -1.32
TRIM41Q8WV44 SNORA38.1-201ENST00000364172 131 ntBASIC6.81□□□□□ -1.32
TRIM41Q8WV44 RNU6-818P-201ENST00000364837 108 ntBASIC6.81□□□□□ -1.32
TRIM41Q8WV44 SNORA72.2-201ENST00000365028 127 ntBASIC6.81□□□□□ -1.32
TRIM41Q8WV44 RNA5SP235-201ENST00000365411 114 ntBASIC6.81□□□□□ -1.32
TRIM41Q8WV44 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC6.81□□□□□ -1.32
TRIM41Q8WV44 RNU2-68P-201ENST00000410878 191 ntBASIC6.81□□□□□ -1.32
TRIM41Q8WV44 RNU6-1245P-201ENST00000411130 106 ntBASIC6.81□□□□□ -1.32
TRIM41Q8WV44 HLA-N-201ENST00000437516 135 ntBASIC6.81□□□□□ -1.32
TRIM41Q8WV44 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC6.81□□□□□ -1.32
TRIM41Q8WV44 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC6.81□□□□□ -1.32
TRIM41Q8WV44 SNRPGP7-201ENST00000469016 106 ntBASIC6.81□□□□□ -1.32
TRIM41Q8WV44 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC6.81□□□□□ -1.32
TRIM41Q8WV44 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TRIM41Q8WV44 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC6.8□□□□□ -1.32
TRIM41Q8WV44 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM41Q8WV44 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
TRIM41Q8WV44 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM41Q8WV44 Y_RNA.182-201ENST00000363880 111 ntBASIC6.8□□□□□ -1.32
TRIM41Q8WV44 SNORA80A-201ENST00000363922 136 ntBASIC6.8□□□□□ -1.32
TRIM41Q8WV44 RNU6-281P-201ENST00000384212 103 ntBASIC6.8□□□□□ -1.32
TRIM41Q8WV44 SNORA40.19-201ENST00000390846 128 ntBASIC6.8□□□□□ -1.32
TRIM41Q8WV44 AL512844.2-201ENST00000433990 593 ntBASIC6.8□□□□□ -1.32
TRIM41Q8WV44 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC6.8□□□□□ -1.32
TRIM41Q8WV44 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC6.8□□□□□ -1.32
TRIM41Q8WV44 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC6.8□□□□□ -1.32
TRIM41Q8WV44 MIR4458-201ENST00000578872 75 ntBASIC6.8□□□□□ -1.32
TRIM41Q8WV44 AC012493.2-201ENST00000595083 291 ntBASIC6.8□□□□□ -1.32
TRIM41Q8WV44 AL133393.1-201ENST00000603277 287 ntBASIC6.8□□□□□ -1.32
TRIM41Q8WV44 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC6.8□□□□□ -1.32
TRIM41Q8WV44 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC6.8□□□□□ -1.32
TRIM41Q8WV44 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TRIM41Q8WV44 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
TRIM41Q8WV44 SPATA31D2P-201ENST00000429999 4388 ntBASIC6.8□□□□□ -1.32
TRIM41Q8WV44 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
TRIM41Q8WV44 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM41Q8WV44 Z82217.1-201ENST00000625157 8149 ntBASIC6.79□□□□□ -1.32
TRIM41Q8WV44 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM41Q8WV44 Y_RNA.7-201ENST00000362352 102 ntBASIC6.79□□□□□ -1.32
TRIM41Q8WV44 RNU4-80P-201ENST00000363200 141 ntBASIC6.79□□□□□ -1.32
TRIM41Q8WV44 SNORA29-201ENST00000384183 140 ntBASIC6.79□□□□□ -1.32
TRIM41Q8WV44 MIR487A-201ENST00000385009 80 ntBASIC6.79□□□□□ -1.32
TRIM41Q8WV44 SNORA48.8-201ENST00000391324 134 ntBASIC6.79□□□□□ -1.32
TRIM41Q8WV44 AC006517.1-201ENST00000480485 328 ntBASIC6.79□□□□□ -1.32
TRIM41Q8WV44 PPBPP1-201ENST00000510807 373 ntBASIC6.79□□□□□ -1.32
TRIM41Q8WV44 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC6.79□□□□□ -1.32
TRIM41Q8WV44 TGIF1P1-201ENST00000558095 802 ntBASIC6.79□□□□□ -1.32
TRIM41Q8WV44 MIR3684-201ENST00000579779 74 ntBASIC6.79□□□□□ -1.32
TRIM41Q8WV44 MIR3145-201ENST00000580727 82 ntBASIC6.79□□□□□ -1.32
TRIM41Q8WV44 RPL12P50-201ENST00000603116 116 ntBASIC6.79□□□□□ -1.32
TRIM41Q8WV44 Y_RNA.778-201ENST00000620203 90 ntBASIC6.79□□□□□ -1.32
TRIM41Q8WV44 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
TRIM41Q8WV44 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
TRIM41Q8WV44 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM41Q8WV44 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM41Q8WV44 RNA5SP205-201ENST00000364653 136 ntBASIC6.78□□□□□ -1.32
TRIM41Q8WV44 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC6.78□□□□□ -1.32
TRIM41Q8WV44 Y_RNA.412-201ENST00000384001 104 ntBASIC6.78□□□□□ -1.32
TRIM41Q8WV44 MIR329-1-201ENST00000385028 80 ntBASIC6.78□□□□□ -1.32
TRIM41Q8WV44 AL357075.1-201ENST00000404107 726 ntBASIC6.78□□□□□ -1.32
TRIM41Q8WV44 AC098614.2-201ENST00000426040 255 ntBASIC6.78□□□□□ -1.32
TRIM41Q8WV44 AL121890.1-201ENST00000435457 205 ntBASIC6.78□□□□□ -1.32
TRIM41Q8WV44 AC005042.3-201ENST00000453230 174 ntBASIC6.78□□□□□ -1.32
TRIM41Q8WV44 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC6.78□□□□□ -1.32
TRIM41Q8WV44 AC114982.1-201ENST00000469402 321 ntBASIC6.78□□□□□ -1.32
TRIM41Q8WV44 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
TRIM41Q8WV44 RNA5SP291-201ENST00000517222 105 ntBASIC6.78□□□□□ -1.32
TRIM41Q8WV44 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC6.78□□□□□ -1.32
TRIM41Q8WV44 CYCSP30-201ENST00000546447 172 ntBASIC6.78□□□□□ -1.32
TRIM41Q8WV44 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC6.78□□□□□ -1.32
TRIM41Q8WV44 CYP4A43P-201ENST00000568156 121 ntBASIC6.78□□□□□ -1.32
TRIM41Q8WV44 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC6.77□□□□□ -1.32
TRIM41Q8WV44 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM41Q8WV44 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM41Q8WV44 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM41Q8WV44 RNU6-312P-201ENST00000364629 107 ntBASIC6.77□□□□□ -1.33
TRIM41Q8WV44 Y_RNA.273-201ENST00000364703 102 ntBASIC6.77□□□□□ -1.33
TRIM41Q8WV44 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC6.77□□□□□ -1.33
TRIM41Q8WV44 Z82210.1-201ENST00000440037 231 ntBASIC6.77□□□□□ -1.33
TRIM41Q8WV44 RN7SL585P-201ENST00000470538 280 ntBASIC6.77□□□□□ -1.33
TRIM41Q8WV44 MAPK10-372ENST00000641954 3413 ntBASIC6.77□□□□□ -1.33
TRIM41Q8WV44 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
TRIM41Q8WV44 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms