Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AL135790.2-201ENST00000437701 267 ntBASIC1.16□□□□□ -2.22
CCDC112Q8NEF3 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.16□□□□□ -2.22
CCDC112Q8NEF3 NDUFB1P2-201ENST00000449477 176 ntBASIC1.16□□□□□ -2.22
CCDC112Q8NEF3 DUXAP8-207ENST00000456786 622 ntBASIC1.16□□□□□ -2.22
CCDC112Q8NEF3 COX6CP14-201ENST00000469580 174 ntBASIC1.16□□□□□ -2.22
CCDC112Q8NEF3 RPL30P12-201ENST00000474666 353 ntBASIC1.16□□□□□ -2.22
CCDC112Q8NEF3 AC087343.1-201ENST00000477341 475 ntBASIC1.16□□□□□ -2.22
CCDC112Q8NEF3 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.16□□□□□ -2.22
CCDC112Q8NEF3 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.16□□□□□ -2.22
CCDC112Q8NEF3 AC025465.3-201ENST00000510570 311 ntBASIC1.16□□□□□ -2.22
CCDC112Q8NEF3 Y_RNA.689-201ENST00000516589 107 ntBASIC1.16□□□□□ -2.22
CCDC112Q8NEF3 RNU6-965P-201ENST00000516721 96 ntBASIC1.16□□□□□ -2.22
CCDC112Q8NEF3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.16□□□□□ -2.22
CCDC112Q8NEF3 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.16□□□□□ -2.22
CCDC112Q8NEF3 AC123904.2-201ENST00000548059 300 ntBASIC1.16□□□□□ -2.22
CCDC112Q8NEF3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.16□□□□□ -2.22
CCDC112Q8NEF3 RPL21P5-201ENST00000554662 472 ntBASIC1.16□□□□□ -2.22
CCDC112Q8NEF3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.16□□□□□ -2.22
CCDC112Q8NEF3 AL391001.1-201ENST00000602747 715 ntBASIC1.16□□□□□ -2.22
CCDC112Q8NEF3 AC069431.2-201ENST00000604149 1099 ntBASIC1.16□□□□□ -2.22
CCDC112Q8NEF3 FRG1KP-201ENST00000623592 341 ntBASIC1.16□□□□□ -2.22
CCDC112Q8NEF3 AC092104.1-201ENST00000497346 1441 ntBASIC1.15□□□□□ -2.22
CCDC112Q8NEF3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
CCDC112Q8NEF3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.15□□□□□ -2.23
CCDC112Q8NEF3 AL008629.1-201ENST00000438615 184 ntBASIC1.15□□□□□ -2.23
CCDC112Q8NEF3 MTND3P1-201ENST00000441336 220 ntBASIC1.15□□□□□ -2.23
CCDC112Q8NEF3 CALM1P1-201ENST00000442082 433 ntBASIC1.15□□□□□ -2.23
CCDC112Q8NEF3 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.15□□□□□ -2.23
CCDC112Q8NEF3 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.15□□□□□ -2.23
CCDC112Q8NEF3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.15□□□□□ -2.23
CCDC112Q8NEF3 AP003122.4-201ENST00000530980 758 ntBASIC1.15□□□□□ -2.23
CCDC112Q8NEF3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.15□□□□□ -2.23
CCDC112Q8NEF3 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.15□□□□□ -2.23
CCDC112Q8NEF3 MIR4307-201ENST00000582802 84 ntBASIC1.15□□□□□ -2.23
CCDC112Q8NEF3 AC012065.4-201ENST00000602445 679 ntBASIC1.15□□□□□ -2.23
CCDC112Q8NEF3 AC144521.1-201ENST00000607148 956 ntBASIC1.15□□□□□ -2.23
CCDC112Q8NEF3 MIR6734-201ENST00000621166 68 ntBASIC1.15□□□□□ -2.23
CCDC112Q8NEF3 AC024940.5-201ENST00000622889 474 ntBASIC1.15□□□□□ -2.23
CCDC112Q8NEF3 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.15□□□□□ -2.23
CCDC112Q8NEF3 AL133216.2-202ENST00000634512 349 ntBASIC1.15□□□□□ -2.23
CCDC112Q8NEF3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 MIR412-201ENST00000362142 91 ntBASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 SNORD114-22-201ENST00000365423 72 ntBASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 RNY1P14-201ENST00000384426 108 ntBASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 RNA5SP390-201ENST00000410191 113 ntBASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 RPS27P16-201ENST00000425758 201 ntBASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 AL627311.1-201ENST00000431514 115 ntBASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 RPS26P55-201ENST00000471178 356 ntBASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 RPL30P6-201ENST00000475925 342 ntBASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 MTCYBP40-201ENST00000509390 1135 ntBASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 AC093259.1-201ENST00000509755 300 ntBASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 SNORA4-201ENST00000584302 138 ntBASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 AC078795.2-201ENST00000602835 1252 ntBASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 AL139022.2-201ENST00000606934 443 ntBASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 AL159153.1-201ENST00000619688 317 ntBASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 MIR1248-201ENST00000629190 106 ntBASIC1.14□□□□□ -2.23
CCDC112Q8NEF3 RNY4P24-201ENST00000362735 96 ntBASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 Y_RNA.99-201ENST00000363138 105 ntBASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 RNU4-92P-201ENST00000363783 136 ntBASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 RNU6-190P-201ENST00000384154 102 ntBASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 SNORD116-20-201ENST00000384529 92 ntBASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 MIR618-201ENST00000385287 98 ntBASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 RPS20P2-201ENST00000402520 389 ntBASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 SNRPEP10-201ENST00000420249 274 ntBASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 MTCO1P44-201ENST00000441935 243 ntBASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 AC012308.1-201ENST00000451232 178 ntBASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 AC112206.3-201ENST00000514578 389 ntBASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 RNU6-1003P-201ENST00000517099 105 ntBASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 RNU6-201P-201ENST00000517100 61 ntBASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 AC107934.1-201ENST00000522215 217 ntBASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 AL356057.1-201ENST00000533798 831 ntBASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 AC008015.1-201ENST00000555505 465 ntBASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 SNORA77B-201ENST00000578179 125 ntBASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 AL138889.2-201ENST00000603883 242 ntBASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 AC013244.3-201ENST00000605614 388 ntBASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 AC004808.1-201ENST00000627671 721 ntBASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
CCDC112Q8NEF3 RNU6-743P-201ENST00000364151 106 ntBASIC1.12□□□□□ -2.23
CCDC112Q8NEF3 RNU4-68P-201ENST00000364314 141 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms