Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 TOMM20P4-201ENST00000427861 435 ntBASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 AL669831.1-202ENST00000428504 417 ntBASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 GTF2IP13-201ENST00000438487 386 ntBASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 AL353689.1-201ENST00000438895 199 ntBASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 AC007969.2-201ENST00000441891 191 ntBASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 AL137159.1-201ENST00000452808 512 ntBASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 MTCO3P28-201ENST00000513351 515 ntBASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 AL590229.1-201ENST00000603497 542 ntBASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 AL132822.1-201ENST00000617063 513 ntBASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 AL159153.1-201ENST00000619688 317 ntBASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 AC120349.3-201ENST00000624377 529 ntBASIC1.82□□□□□ -2.12
CCDC50Q8IVM0 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 RNU6-37P-201ENST00000362692 107 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 RNU6-743P-201ENST00000364151 106 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 RNU6-11P-201ENST00000364234 107 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 RNU5E-7P-201ENST00000365290 117 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 RNU6-25P-201ENST00000383873 107 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 RNU6-1-201ENST00000383898 107 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 RNU6-1029P-201ENST00000384109 107 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 RNU6-48P-201ENST00000384161 107 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 RNU6-36P-201ENST00000384172 107 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 RNU6-4P-201ENST00000384205 107 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 RNU6-5P-201ENST00000384238 107 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 RNU6-3P-201ENST00000384314 107 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 RNU6-16P-201ENST00000384385 107 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 RNU6-15P-201ENST00000384534 107 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 RNU6-2-201ENST00000384627 107 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 RNU6-29P-201ENST00000384637 107 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 RNU6-9-201ENST00000384776 107 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 RNU6-33P-201ENST00000384793 107 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 MIR454-201ENST00000390180 115 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 RAP1BP3-201ENST00000407180 549 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 OR9R1P-201ENST00000412200 877 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 KATNBL1P3-201ENST00000443475 909 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 AC079781.2-201ENST00000446424 169 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 AC079448.1-201ENST00000449377 373 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 snoU13.14-201ENST00000459372 104 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 AC074344.1-201ENST00000512823 224 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 SNORD27.1-201ENST00000516319 72 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 AC145350.1-201ENST00000567426 208 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 AC005034.5-201ENST00000604219 466 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 RNU6-6P-201ENST00000606623 107 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 AC104073.3-201ENST00000610942 955 ntBASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CCDC50Q8IVM0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
CCDC50Q8IVM0 Y_RNA.201-201ENST00000364052 96 ntBASIC1.8□□□□□ -2.12
CCDC50Q8IVM0 RNU6-546P-201ENST00000383991 107 ntBASIC1.8□□□□□ -2.12
CCDC50Q8IVM0 RNU5A-2P-201ENST00000384337 116 ntBASIC1.8□□□□□ -2.12
CCDC50Q8IVM0 MIR583-201ENST00000384846 75 ntBASIC1.8□□□□□ -2.12
CCDC50Q8IVM0 MIR544A-201ENST00000384855 91 ntBASIC1.8□□□□□ -2.12
CCDC50Q8IVM0 MIR1294-201ENST00000408503 142 ntBASIC1.8□□□□□ -2.12
CCDC50Q8IVM0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.8□□□□□ -2.12
CCDC50Q8IVM0 RPL39P29-201ENST00000447779 157 ntBASIC1.8□□□□□ -2.12
CCDC50Q8IVM0 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC50Q8IVM0 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC50Q8IVM0 AC104581.2-201ENST00000572227 430 ntBASIC1.8□□□□□ -2.12
CCDC50Q8IVM0 MIR4513-201ENST00000581077 86 ntBASIC1.8□□□□□ -2.12
CCDC50Q8IVM0 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.8□□□□□ -2.12
CCDC50Q8IVM0 SNRPGP17-201ENST00000603780 214 ntBASIC1.8□□□□□ -2.12
CCDC50Q8IVM0 AL670379.2-201ENST00000604983 252 ntBASIC1.8□□□□□ -2.12
CCDC50Q8IVM0 AC009318.2-201ENST00000610917 651 ntBASIC1.8□□□□□ -2.12
CCDC50Q8IVM0 Z69720.2-201ENST00000624755 279 ntBASIC1.8□□□□□ -2.12
CCDC50Q8IVM0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.8□□□□□ -2.12
CCDC50Q8IVM0 RNU6-527P-201ENST00000363425 104 ntBASIC1.79□□□□□ -2.12
CCDC50Q8IVM0 Y_RNA.324-201ENST00000365165 102 ntBASIC1.79□□□□□ -2.12
CCDC50Q8IVM0 RNU6-108P-201ENST00000365558 107 ntBASIC1.79□□□□□ -2.12
CCDC50Q8IVM0 MTCO2P34-201ENST00000421994 607 ntBASIC1.79□□□□□ -2.12
CCDC50Q8IVM0 BX510359.4-201ENST00000423750 193 ntBASIC1.79□□□□□ -2.12
CCDC50Q8IVM0 RPL32P28-201ENST00000443577 397 ntBASIC1.79□□□□□ -2.12
CCDC50Q8IVM0 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC50Q8IVM0 RPS27AP8-201ENST00000452665 445 ntBASIC1.79□□□□□ -2.12
CCDC50Q8IVM0 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.79□□□□□ -2.12
CCDC50Q8IVM0 PRELID3BP1-201ENST00000457142 540 ntBASIC1.79□□□□□ -2.12
CCDC50Q8IVM0 AC006026.2-201ENST00000457376 180 ntBASIC1.79□□□□□ -2.12
CCDC50Q8IVM0 RNU7-182P-201ENST00000459009 62 ntBASIC1.79□□□□□ -2.12
CCDC50Q8IVM0 RNA5SP269-201ENST00000459032 137 ntBASIC1.79□□□□□ -2.12
CCDC50Q8IVM0 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC50Q8IVM0 RNA5SP182-201ENST00000516064 82 ntBASIC1.79□□□□□ -2.12
CCDC50Q8IVM0 RNA5SP503-201ENST00000517047 117 ntBASIC1.79□□□□□ -2.12
CCDC50Q8IVM0 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC50Q8IVM0 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.79□□□□□ -2.12
CCDC50Q8IVM0 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.79□□□□□ -2.12
CCDC50Q8IVM0 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.79□□□□□ -2.12
CCDC50Q8IVM0 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms