Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 RNU6-2-201ENST00000384627 107 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-29P-201ENST00000384637 107 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-9-201ENST00000384776 107 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-33P-201ENST00000384793 107 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 RNU1-101P-201ENST00000391171 127 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 5S_rRNA.2-201ENST00000391293 112 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 AL356432.1-201ENST00000405809 419 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 HIGD1AP11-201ENST00000438361 280 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 RPS12P2-201ENST00000439728 269 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 MRPL50P4-201ENST00000446432 475 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 RPL7P43-201ENST00000478876 753 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 AC026801.1-201ENST00000497178 464 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 FGF7P4-201ENST00000509595 295 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 FGF7P1-201ENST00000582820 288 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 MIR3672-201ENST00000584290 82 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 RNU6-6P-201ENST00000606623 107 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 AC103810.6-201ENST00000606708 136 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 AC004852.3-201ENST00000614131 326 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 FAM157A-202ENST00000615155 405 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 TPTEP1-208ENST00000636884 213 ntBASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.34□□□□□ -1.87
KRT28Q7Z3Y7 AC080128.1-201ENST00000474389 1917 ntBASIC3.34□□□□□ -1.88
KRT28Q7Z3Y7 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.33□□□□□ -1.88
KRT28Q7Z3Y7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
KRT28Q7Z3Y7 RNU6-128P-201ENST00000383976 107 ntBASIC3.33□□□□□ -1.88
KRT28Q7Z3Y7 AL359672.1-201ENST00000442302 409 ntBASIC3.33□□□□□ -1.88
KRT28Q7Z3Y7 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.33□□□□□ -1.88
KRT28Q7Z3Y7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.33□□□□□ -1.88
KRT28Q7Z3Y7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KRT28Q7Z3Y7 Y_RNA.682-201ENST00000516457 100 ntBASIC3.33□□□□□ -1.88
KRT28Q7Z3Y7 CKS1BP7-201ENST00000522230 235 ntBASIC3.33□□□□□ -1.88
KRT28Q7Z3Y7 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.33□□□□□ -1.88
KRT28Q7Z3Y7 AC008121.1-201ENST00000603244 268 ntBASIC3.33□□□□□ -1.88
KRT28Q7Z3Y7 C8orf59P2-201ENST00000603441 271 ntBASIC3.33□□□□□ -1.88
KRT28Q7Z3Y7 AC104237.2-201ENST00000612456 443 ntBASIC3.33□□□□□ -1.88
KRT28Q7Z3Y7 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.33□□□□□ -1.88
KRT28Q7Z3Y7 AC104985.2-201ENST00000620598 500 ntBASIC3.33□□□□□ -1.88
KRT28Q7Z3Y7 MIR3199-2-201ENST00000636243 86 ntBASIC3.33□□□□□ -1.88
KRT28Q7Z3Y7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.33□□□□□ -1.88
KRT28Q7Z3Y7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.33□□□□□ -1.88
KRT28Q7Z3Y7 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.33□□□□□ -1.88
KRT28Q7Z3Y7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
KRT28Q7Z3Y7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
KRT28Q7Z3Y7 RNA5SP456-201ENST00000364002 114 ntBASIC3.32□□□□□ -1.88
KRT28Q7Z3Y7 Y_RNA.301-201ENST00000364990 103 ntBASIC3.32□□□□□ -1.88
KRT28Q7Z3Y7 MT-TD-201ENST00000387419 68 ntBASIC3.32□□□□□ -1.88
KRT28Q7Z3Y7 AC016831.2-201ENST00000417179 352 ntBASIC3.32□□□□□ -1.88
KRT28Q7Z3Y7 NCOR1P3-201ENST00000420479 303 ntBASIC3.32□□□□□ -1.88
KRT28Q7Z3Y7 AL139396.1-201ENST00000421137 167 ntBASIC3.32□□□□□ -1.88
KRT28Q7Z3Y7 BPY2DP-201ENST00000422208 265 ntBASIC3.32□□□□□ -1.88
KRT28Q7Z3Y7 AC093151.1-201ENST00000427711 313 ntBASIC3.32□□□□□ -1.88
KRT28Q7Z3Y7 AL714022.1-201ENST00000439897 151 ntBASIC3.32□□□□□ -1.88
KRT28Q7Z3Y7 AC104389.3-201ENST00000445629 235 ntBASIC3.32□□□□□ -1.88
KRT28Q7Z3Y7 RNA5SP385-201ENST00000515947 110 ntBASIC3.32□□□□□ -1.88
KRT28Q7Z3Y7 RNA5SP458-201ENST00000516188 119 ntBASIC3.32□□□□□ -1.88
KRT28Q7Z3Y7 Y_RNA.687-201ENST00000516558 91 ntBASIC3.32□□□□□ -1.88
KRT28Q7Z3Y7 Y_RNA.691-201ENST00000516611 103 ntBASIC3.32□□□□□ -1.88
KRT28Q7Z3Y7 RNU6-566P-201ENST00000516790 107 ntBASIC3.32□□□□□ -1.88
KRT28Q7Z3Y7 RNU6-1088P-201ENST00000516850 104 ntBASIC3.32□□□□□ -1.88
KRT28Q7Z3Y7 RAB11AP2-201ENST00000545905 639 ntBASIC3.32□□□□□ -1.88
KRT28Q7Z3Y7 AC026371.1-201ENST00000551867 419 ntBASIC3.32□□□□□ -1.88
KRT28Q7Z3Y7 AC009233.1-201ENST00000616477 371 ntBASIC3.32□□□□□ -1.88
KRT28Q7Z3Y7 AL133216.2-202ENST00000634512 349 ntBASIC3.32□□□□□ -1.88
KRT28Q7Z3Y7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
KRT28Q7Z3Y7 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 AC110491.1-201ENST00000562191 2010 ntBASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 AC110774.1-201ENST00000623567 2018 ntBASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 AC069528.2-201ENST00000624849 1991 ntBASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 Y_RNA.4-201ENST00000362333 112 ntBASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 RNU6-562P-201ENST00000362731 107 ntBASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 Y_RNA.135-201ENST00000363439 95 ntBASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 RNU1-91P-201ENST00000364746 163 ntBASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 Z98749.2-208ENST00000381646 500 ntBASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 RNU6-1106P-201ENST00000390845 107 ntBASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 AL096701.2-201ENST00000416920 238 ntBASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 AC098831.1-201ENST00000440661 216 ntBASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 AL031274.1-201ENST00000450334 232 ntBASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 AC233279.1-201ENST00000455300 423 ntBASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 AMD1P1-201ENST00000457220 922 ntBASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 RNU7-23P-201ENST00000459465 62 ntBASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 RPL23AP49-201ENST00000492925 468 ntBASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 AC026436.1-201ENST00000510537 270 ntBASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 MTND3P22-201ENST00000510932 243 ntBASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 AC113155.1-201ENST00000511141 769 ntBASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 AL133393.1-201ENST00000603277 287 ntBASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 AC123912.5-201ENST00000605470 343 ntBASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 AC016717.2-201ENST00000609089 5141 ntBASIC3.31□□□□□ -1.88
KRT28Q7Z3Y7 FAM35CP-201ENST00000554755 2470 ntBASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 Y_RNA.184-201ENST00000363884 108 ntBASIC3.3□□□□□ -1.88
KRT28Q7Z3Y7 RNU6-1280P-201ENST00000365211 107 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms