Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 Y_RNA.158-201ENST00000363651 101 ntBASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 RNU6-595P-201ENST00000363944 107 ntBASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 RNU1-140P-201ENST00000365040 165 ntBASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 RNU1-115P-201ENST00000365329 160 ntBASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 RNU6-784P-201ENST00000384330 106 ntBASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 Y_RNA.577-201ENST00000384794 101 ntBASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 RPL21P3-201ENST00000395517 478 ntBASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 RNU6-1156P-201ENST00000410365 100 ntBASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 RNU6-1245P-201ENST00000411130 106 ntBASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 AL161651.1-201ENST00000440882 223 ntBASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 UBBP3-201ENST00000445497 241 ntBASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 AC146507.2-201ENST00000460608 476 ntBASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 FTH1P2-201ENST00000466086 412 ntBASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 AC009812.2-201ENST00000517657 457 ntBASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 AC023442.1-201ENST00000531247 422 ntBASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 AC009163.5-201ENST00000575421 637 ntBASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 AC024581.2-201ENST00000619986 252 ntBASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 AC091903.1-201ENST00000624322 454 ntBASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 AC110079.1-202ENST00000635213 138 ntBASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 AC009093.8-201ENST00000641769 292 ntBASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PTCHD4Q6ZW05 AC009541.1-201ENST00000438279 2662 ntBASIC3□□□□□ -1.93
PTCHD4Q6ZW05 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
PTCHD4Q6ZW05 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3□□□□□ -1.93
PTCHD4Q6ZW05 RNU4-35P-201ENST00000362588 141 ntBASIC3□□□□□ -1.93
PTCHD4Q6ZW05 Y_RNA.459-201ENST00000384251 102 ntBASIC3□□□□□ -1.93
PTCHD4Q6ZW05 AL138885.1-201ENST00000405921 675 ntBASIC3□□□□□ -1.93
PTCHD4Q6ZW05 RNU2-49P-201ENST00000410666 184 ntBASIC3□□□□□ -1.93
PTCHD4Q6ZW05 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3□□□□□ -1.93
PTCHD4Q6ZW05 AL031659.1-201ENST00000447075 539 ntBASIC3□□□□□ -1.93
PTCHD4Q6ZW05 RBMY2UP-201ENST00000453474 324 ntBASIC3□□□□□ -1.93
PTCHD4Q6ZW05 AC106707.2-201ENST00000484182 374 ntBASIC3□□□□□ -1.93
PTCHD4Q6ZW05 AKIRIN2P1-201ENST00000505898 352 ntBASIC3□□□□□ -1.93
PTCHD4Q6ZW05 RNU6-1046P-201ENST00000516538 107 ntBASIC3□□□□□ -1.93
PTCHD4Q6ZW05 SNORA31.23-201ENST00000517219 133 ntBASIC3□□□□□ -1.93
PTCHD4Q6ZW05 IGKV2-26-201ENST00000518305 343 ntBASIC3□□□□□ -1.93
PTCHD4Q6ZW05 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3□□□□□ -1.93
PTCHD4Q6ZW05 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3□□□□□ -1.93
PTCHD4Q6ZW05 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3□□□□□ -1.93
PTCHD4Q6ZW05 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3□□□□□ -1.93
PTCHD4Q6ZW05 AC008739.2-201ENST00000597006 317 ntBASIC3□□□□□ -1.93
PTCHD4Q6ZW05 AC136443.5-201ENST00000603741 370 ntBASIC3□□□□□ -1.93
PTCHD4Q6ZW05 AC019159.1-201ENST00000605094 187 ntBASIC3□□□□□ -1.93
PTCHD4Q6ZW05 MIR1244-1-201ENST00000612829 85 ntBASIC3□□□□□ -1.93
PTCHD4Q6ZW05 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3□□□□□ -1.93
PTCHD4Q6ZW05 MIR1244-3-201ENST00000635744 85 ntBASIC3□□□□□ -1.93
PTCHD4Q6ZW05 MIR1244-2-201ENST00000636449 85 ntBASIC3□□□□□ -1.93
PTCHD4Q6ZW05 MIR1244-4-202ENST00000636813 85 ntBASIC3□□□□□ -1.93
PTCHD4Q6ZW05 AL356274.2-201ENST00000624379 3752 ntBASIC3□□□□□ -1.93
PTCHD4Q6ZW05 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
PTCHD4Q6ZW05 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3□□□□□ -1.93
PTCHD4Q6ZW05 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 Y_RNA.80-201ENST00000362996 102 ntBASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 Y_RNA.485-201ENST00000384395 102 ntBASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 RN7SKP111-201ENST00000410349 271 ntBASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 RNU2-23P-201ENST00000410545 195 ntBASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 AC007969.2-201ENST00000441891 191 ntBASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 AC012308.1-201ENST00000451232 178 ntBASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 CYCSP35-201ENST00000451978 304 ntBASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 RNU4-77P-201ENST00000516692 156 ntBASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 SNORA31.21-201ENST00000517180 77 ntBASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 RNA5SP380-201ENST00000517190 98 ntBASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 AC106785.1-201ENST00000565935 262 ntBASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 AC004584.2-201ENST00000570407 410 ntBASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 MIR5701-3-201ENST00000578890 82 ntBASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 MIR5701-1-201ENST00000585138 82 ntBASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 AC078899.3-201ENST00000599065 212 ntBASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 AC010620.2-201ENST00000600135 313 ntBASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 MIR5701-2-201ENST00000615634 82 ntBASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PTCHD4Q6ZW05 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 290.1 ms