Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 AC138393.1-203ENST00000327086 343 ntBASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 Y_RNA.315-201ENST00000365117 102 ntBASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 RNU6-43P-201ENST00000384302 107 ntBASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 Y_RNA.482-201ENST00000384377 111 ntBASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 SNORA48.2-201ENST00000390926 124 ntBASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 MTCO2P27-201ENST00000420740 428 ntBASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 AC112220.1-201ENST00000434628 355 ntBASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 RNU7-152P-201ENST00000458982 64 ntBASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 snoU13.22-201ENST00000459428 104 ntBASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 RNU7-138P-201ENST00000459479 64 ntBASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 AC107626.1-201ENST00000471084 183 ntBASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 AC090525.1-201ENST00000479116 478 ntBASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 AC011005.2-201ENST00000487324 359 ntBASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 HMGB1P30-201ENST00000492455 606 ntBASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 APOOP3-201ENST00000536787 586 ntBASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 AC079600.2-201ENST00000550076 130 ntBASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 AC064836.2-201ENST00000609491 462 ntBASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.36□□□□□ -2.03
SNAI3Q3KNW1 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AC010889.1-201ENST00000566193 2666 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 MIR412-201ENST00000362142 91 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 SNORD3E-201ENST00000362899 217 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 Y_RNA.138-201ENST00000363462 102 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 RNU1-112P-201ENST00000364401 164 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 RNU6-384P-201ENST00000364900 104 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 Y_RNA.324-201ENST00000365165 102 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 RNU6-658P-201ENST00000384606 106 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 RNU6-95P-201ENST00000384697 107 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 Y_RNA.579-201ENST00000390939 94 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 RNY4P36-201ENST00000391116 96 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 MTCYBP4-201ENST00000401524 249 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AL138827.1-201ENST00000402666 306 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 RNU6-370P-201ENST00000411008 104 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 RNU2-25P-201ENST00000411041 191 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 RPL26P27-201ENST00000414397 437 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AL590632.1-201ENST00000424289 371 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 MTCO2P12-201ENST00000427426 682 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 HMGB1P9-201ENST00000429856 646 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AC087499.2-201ENST00000432861 149 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AL445687.1-201ENST00000439946 251 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 NDUFB1P2-201ENST00000449477 176 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AC139453.3-201ENST00000493276 369 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AC026801.1-201ENST00000497178 464 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AIG1P1-201ENST00000503376 148 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AC092436.3-201ENST00000511788 257 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 MIR892C-201ENST00000516410 77 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 RPPH1-2P-201ENST00000516688 293 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 SNORA31.15-201ENST00000516771 132 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AC069113.1-201ENST00000517763 267 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AC025755.1-201ENST00000521306 278 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AC025423.5-201ENST00000550230 219 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AC026371.1-201ENST00000551867 419 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 NACAP3-201ENST00000552100 481 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AL442663.2-201ENST00000554385 511 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AC093249.1-201ENST00000567049 203 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AL451007.1-201ENST00000595491 289 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AL161756.2-201ENST00000604597 246 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AC007938.3-201ENST00000604965 623 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AC084781.2-201ENST00000615568 161 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AC098657.3-201ENST00000620434 263 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 MIR3199-2-201ENST00000636243 86 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
SNAI3Q3KNW1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 SNORD42.2-201ENST00000365570 69 ntBASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 RNU6-214P-201ENST00000384130 107 ntBASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 SNORA9-201ENST00000384215 133 ntBASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 AL353729.1-201ENST00000425044 720 ntBASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 AL645568.3-201ENST00000433683 316 ntBASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 AC098831.1-201ENST00000440661 216 ntBASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 AC130509.1-201ENST00000464158 433 ntBASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.34□□□□□ -2.03
SNAI3Q3KNW1 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 161.6 ms