Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC087045.1-201ENST00000605856 382 ntBASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 AC109347.2-201ENST00000610220 349 ntBASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 AC005296.1-201ENST00000616145 209 ntBASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 ZNF355P-201ENST00000427301 3216 ntBASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 ZNF680P1-201ENST00000436625 1469 ntBASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 AC002543.1-201ENST00000299783 1954 ntBASIC2.25□□□□□ -2.05
SHROOM1Q2M3G4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 Y_RNA.296-201ENST00000364930 108 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 RNU6-715P-201ENST00000365204 103 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 RNU4-48P-201ENST00000365559 182 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 RNU6-72P-201ENST00000384285 79 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 RNU6-1119P-201ENST00000384349 108 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 RNU6-387P-201ENST00000411331 105 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 USP9YP14-201ENST00000430663 563 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 AC009238.1-201ENST00000442165 424 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 AC009237.6-201ENST00000446969 424 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 MTND1P18-201ENST00000448191 573 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 AC090515.1-201ENST00000465295 476 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 AC107032.1-201ENST00000485945 480 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 MTCO3P9-201ENST00000506989 781 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 MRPS17P9-201ENST00000511924 393 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 OR5AQ1P-201ENST00000527596 927 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 FAM92A1P1-201ENST00000528023 890 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 MIR4287-201ENST00000579398 78 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 MIR5692A1-201ENST00000580523 69 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 AC008752.3-201ENST00000588113 712 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 AL670379.10-201ENST00000604330 253 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 AL138963.2-201ENST00000605137 226 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 AL670379.9-201ENST00000605428 253 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 AC007684.1-201ENST00000609671 477 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 AL162373.1-201ENST00000620433 407 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 AC092656.1-203ENST00000624134 423 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 Z75746.1-201ENST00000440243 2080 ntBASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.24□□□□□ -2.05
SHROOM1Q2M3G4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 OR4G2P-201ENST00000328113 903 ntBASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 RNU6-45P-201ENST00000384471 107 ntBASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 SNORA46.1-201ENST00000391069 153 ntBASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 MTATP6P18-201ENST00000417994 673 ntBASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 AC016907.1-201ENST00000419483 435 ntBASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 MTCYBP8-201ENST00000422855 651 ntBASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 AL596276.1-201ENST00000434465 418 ntBASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 AC068781.1-201ENST00000488231 618 ntBASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 AC140059.1-201ENST00000489238 361 ntBASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 RNA5SP458-201ENST00000516188 119 ntBASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 AP003392.2-201ENST00000527269 208 ntBASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 AP003072.2-201ENST00000527756 676 ntBASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 BNIP3P6-201ENST00000549284 499 ntBASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 MIR4703-201ENST00000577728 79 ntBASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 AL096840.1-201ENST00000603287 93 ntBASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 AL391646.1-201ENST00000603860 190 ntBASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 AC008945.2-201ENST00000606056 604 ntBASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 AC103591.3-201ENST00000608684 209 ntBASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.23□□□□□ -2.05
SHROOM1Q2M3G4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
SHROOM1Q2M3G4 Y_RNA.409-201ENST00000383990 98 ntBASIC2.22□□□□□ -2.05
SHROOM1Q2M3G4 RNA5SP338-201ENST00000410495 85 ntBASIC2.22□□□□□ -2.05
SHROOM1Q2M3G4 AL358453.1-201ENST00000422522 250 ntBASIC2.22□□□□□ -2.05
SHROOM1Q2M3G4 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC2.22□□□□□ -2.05
SHROOM1Q2M3G4 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.22□□□□□ -2.05
SHROOM1Q2M3G4 AC073464.1-201ENST00000429823 534 ntBASIC2.22□□□□□ -2.05
SHROOM1Q2M3G4 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.22□□□□□ -2.05
SHROOM1Q2M3G4 DNAJC19P4-201ENST00000440115 345 ntBASIC2.22□□□□□ -2.05
SHROOM1Q2M3G4 AC012308.1-201ENST00000451232 178 ntBASIC2.22□□□□□ -2.05
SHROOM1Q2M3G4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.22□□□□□ -2.05
SHROOM1Q2M3G4 AC079382.1-201ENST00000493346 557 ntBASIC2.22□□□□□ -2.05
SHROOM1Q2M3G4 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.22□□□□□ -2.05
SHROOM1Q2M3G4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.22□□□□□ -2.05
SHROOM1Q2M3G4 MTATP6P3-201ENST00000581686 676 ntBASIC2.22□□□□□ -2.05
SHROOM1Q2M3G4 AL355297.2-201ENST00000604792 129 ntBASIC2.22□□□□□ -2.05
SHROOM1Q2M3G4 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.22□□□□□ -2.05
SHROOM1Q2M3G4 AL354685.2-201ENST00000448218 1447 ntBASIC2.22□□□□□ -2.05
SHROOM1Q2M3G4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
SHROOM1Q2M3G4 RBBP8P1-201ENST00000449447 1844 ntBASIC2.21□□□□□ -2.05
SHROOM1Q2M3G4 MIRLET7G-201ENST00000362280 84 ntBASIC2.21□□□□□ -2.06
SHROOM1Q2M3G4 RNU6-942P-201ENST00000363002 107 ntBASIC2.21□□□□□ -2.06
SHROOM1Q2M3G4 RNU4-52P-201ENST00000384209 138 ntBASIC2.21□□□□□ -2.06
SHROOM1Q2M3G4 SNORD116-20-201ENST00000384529 92 ntBASIC2.21□□□□□ -2.06
SHROOM1Q2M3G4 AC019129.1-201ENST00000403786 261 ntBASIC2.21□□□□□ -2.06
SHROOM1Q2M3G4 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC2.21□□□□□ -2.06
SHROOM1Q2M3G4 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.21□□□□□ -2.06
SHROOM1Q2M3G4 AL353621.1-201ENST00000418219 243 ntBASIC2.21□□□□□ -2.06
SHROOM1Q2M3G4 AC097463.2-201ENST00000421074 142 ntBASIC2.21□□□□□ -2.06
SHROOM1Q2M3G4 AL353193.1-201ENST00000421444 268 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms