Protein–RNA interactions for Protein: Q15906

VPS72, Vacuolar protein sorting-associated protein 72 homolog, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72Q15906 RPL21P41-201ENST00000459863 264 ntBASIC3.81□□□□□ -1.8
VPS72Q15906 RN7SL20P-201ENST00000488827 297 ntBASIC3.81□□□□□ -1.8
VPS72Q15906 RPS29P21-201ENST00000496272 170 ntBASIC3.81□□□□□ -1.8
VPS72Q15906 AC026801.1-201ENST00000497178 464 ntBASIC3.81□□□□□ -1.8
VPS72Q15906 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS72Q15906 Y_RNA.676-201ENST00000516393 96 ntBASIC3.81□□□□□ -1.8
VPS72Q15906 RNA5SP148-201ENST00000516527 94 ntBASIC3.81□□□□□ -1.8
VPS72Q15906 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.81□□□□□ -1.8
VPS72Q15906 AC009902.1-201ENST00000519351 183 ntBASIC3.81□□□□□ -1.8
VPS72Q15906 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.81□□□□□ -1.8
VPS72Q15906 AL391261.3-201ENST00000557194 520 ntBASIC3.81□□□□□ -1.8
VPS72Q15906 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
VPS72Q15906 AC018462.2-201ENST00000605375 395 ntBASIC3.81□□□□□ -1.8
VPS72Q15906 AC002044.1-201ENST00000606707 158 ntBASIC3.81□□□□□ -1.8
VPS72Q15906 AC107294.3-201ENST00000609211 526 ntBASIC3.81□□□□□ -1.8
VPS72Q15906 AL132822.1-201ENST00000617063 513 ntBASIC3.81□□□□□ -1.8
VPS72Q15906 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS72Q15906 AL512643.1-201ENST00000635735 524 ntBASIC3.81□□□□□ -1.8
VPS72Q15906 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
VPS72Q15906 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
VPS72Q15906 AC010680.1-201ENST00000590024 3590 ntBASIC3.8□□□□□ -1.8
VPS72Q15906 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.8□□□□□ -1.8
VPS72Q15906 RNU6-266P-201ENST00000364225 107 ntBASIC3.8□□□□□ -1.8
VPS72Q15906 RNU6-371P-201ENST00000364283 108 ntBASIC3.8□□□□□ -1.8
VPS72Q15906 RNU6-306P-201ENST00000384617 107 ntBASIC3.8□□□□□ -1.8
VPS72Q15906 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.8□□□□□ -1.8
VPS72Q15906 RPL21P90-201ENST00000415692 466 ntBASIC3.8□□□□□ -1.8
VPS72Q15906 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS72Q15906 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.8□□□□□ -1.8
VPS72Q15906 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS72Q15906 AC096745.1-201ENST00000509945 370 ntBASIC3.8□□□□□ -1.8
VPS72Q15906 RAC1P5-201ENST00000512182 576 ntBASIC3.8□□□□□ -1.8
VPS72Q15906 RNU6-991P-201ENST00000516168 107 ntBASIC3.8□□□□□ -1.8
VPS72Q15906 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS72Q15906 AP003122.3-201ENST00000526316 255 ntBASIC3.8□□□□□ -1.8
VPS72Q15906 MIR4680-201ENST00000580906 66 ntBASIC3.8□□□□□ -1.8
VPS72Q15906 AC011890.2-201ENST00000613393 294 ntBASIC3.8□□□□□ -1.8
VPS72Q15906 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS72Q15906 AC092628.2-201ENST00000622492 339 ntBASIC3.8□□□□□ -1.8
VPS72Q15906 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
VPS72Q15906 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
VPS72Q15906 AC091564.4-201ENST00000533934 2194 ntBASIC3.8□□□□□ -1.8
VPS72Q15906 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS72Q15906 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS72Q15906 AC138393.1-203ENST00000327086 343 ntBASIC3.79□□□□□ -1.8
VPS72Q15906 SNORD62.1-201ENST00000362541 86 ntBASIC3.79□□□□□ -1.8
VPS72Q15906 RNU6-1032P-201ENST00000384100 107 ntBASIC3.79□□□□□ -1.8
VPS72Q15906 RNU6-214P-201ENST00000384130 107 ntBASIC3.79□□□□□ -1.8
VPS72Q15906 Y_RNA.463-201ENST00000384271 102 ntBASIC3.79□□□□□ -1.8
VPS72Q15906 MIR301A-201ENST00000385261 86 ntBASIC3.79□□□□□ -1.8
VPS72Q15906 SNORA75.6-201ENST00000391318 127 ntBASIC3.79□□□□□ -1.8
VPS72Q15906 EI24P2-201ENST00000397776 1076 ntBASIC3.79□□□□□ -1.8
VPS72Q15906 MRPL42P3-201ENST00000401492 326 ntBASIC3.79□□□□□ -1.8
VPS72Q15906 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS72Q15906 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS72Q15906 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS72Q15906 Y_RNA.661-201ENST00000516003 99 ntBASIC3.79□□□□□ -1.8
VPS72Q15906 RNU6-914P-201ENST00000516749 109 ntBASIC3.79□□□□□ -1.8
VPS72Q15906 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS72Q15906 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS72Q15906 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
VPS72Q15906 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS72Q15906 HMGN2P15-201ENST00000585707 270 ntBASIC3.79□□□□□ -1.8
VPS72Q15906 BNIP3P16-201ENST00000589779 534 ntBASIC3.79□□□□□ -1.8
VPS72Q15906 AC073539.2-201ENST00000597113 165 ntBASIC3.79□□□□□ -1.8
VPS72Q15906 AL355877.2-201ENST00000603670 358 ntBASIC3.79□□□□□ -1.8
VPS72Q15906 AC007485.1-201ENST00000616755 206 ntBASIC3.79□□□□□ -1.8
VPS72Q15906 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS72Q15906 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS72Q15906 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS72Q15906 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.79□□□□□ -1.8
VPS72Q15906 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
VPS72Q15906 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS72Q15906 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.78□□□□□ -1.8
VPS72Q15906 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VPS72Q15906 Y_RNA.158-201ENST00000363651 101 ntBASIC3.78□□□□□ -1.8
VPS72Q15906 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
VPS72Q15906 RNU6-196P-201ENST00000384315 107 ntBASIC3.78□□□□□ -1.8
VPS72Q15906 RNA5SP21-201ENST00000410917 96 ntBASIC3.78□□□□□ -1.8
VPS72Q15906 RN7SKP192-201ENST00000411291 327 ntBASIC3.78□□□□□ -1.8
VPS72Q15906 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS72Q15906 FABP5P15-201ENST00000453566 214 ntBASIC3.78□□□□□ -1.8
VPS72Q15906 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS72Q15906 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS72Q15906 AC092436.3-201ENST00000511788 257 ntBASIC3.78□□□□□ -1.8
VPS72Q15906 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.78□□□□□ -1.8
VPS72Q15906 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.78□□□□□ -1.8
VPS72Q15906 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VPS72Q15906 MIR5692A1-201ENST00000580523 69 ntBASIC3.78□□□□□ -1.8
VPS72Q15906 AL355598.1-201ENST00000604169 202 ntBASIC3.78□□□□□ -1.8
VPS72Q15906 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VPS72Q15906 AC005014.2-201ENST00000607795 599 ntBASIC3.78□□□□□ -1.8
VPS72Q15906 U7.8-201ENST00000619968 63 ntBASIC3.78□□□□□ -1.8
VPS72Q15906 Z99571.1-201ENST00000636677 394 ntBASIC3.78□□□□□ -1.8
VPS72Q15906 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
VPS72Q15906 MAPK10-322ENST00000641485 4530 ntBASIC3.77□□□□□ -1.81
VPS72Q15906 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.77□□□□□ -1.81
VPS72Q15906 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS72Q15906 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VPS72Q15906 Y_RNA.252-201ENST00000364556 101 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms