Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.83□□□□□ -1.8
SSRP1Q08945 DNAJC8P1-201ENST00000554535 372 ntBASIC3.83□□□□□ -1.8
SSRP1Q08945 AC060766.3-201ENST00000591442 263 ntBASIC3.83□□□□□ -1.8
SSRP1Q08945 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.83□□□□□ -1.8
SSRP1Q08945 AL606534.2-204ENST00000635008 178 ntBASIC3.83□□□□□ -1.8
SSRP1Q08945 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SSRP1Q08945 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SSRP1Q08945 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.82□□□□□ -1.8
SSRP1Q08945 AC008669.1-201ENST00000565823 2178 ntBASIC3.82□□□□□ -1.8
SSRP1Q08945 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
SSRP1Q08945 RNU1-75P-201ENST00000347264 129 ntBASIC3.82□□□□□ -1.8
SSRP1Q08945 SNORD32A-201ENST00000364805 84 ntBASIC3.82□□□□□ -1.8
SSRP1Q08945 Y_RNA.459-201ENST00000384251 102 ntBASIC3.82□□□□□ -1.8
SSRP1Q08945 RNU6-748P-201ENST00000384648 107 ntBASIC3.82□□□□□ -1.8
SSRP1Q08945 MIR544A-201ENST00000384855 91 ntBASIC3.82□□□□□ -1.8
SSRP1Q08945 RNU6-750P-201ENST00000390946 107 ntBASIC3.82□□□□□ -1.8
SSRP1Q08945 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SSRP1Q08945 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.82□□□□□ -1.8
SSRP1Q08945 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.82□□□□□ -1.8
SSRP1Q08945 AC092423.1-201ENST00000430165 186 ntBASIC3.82□□□□□ -1.8
SSRP1Q08945 CST9LP2-201ENST00000437612 320 ntBASIC3.82□□□□□ -1.8
SSRP1Q08945 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
SSRP1Q08945 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC3.82□□□□□ -1.8
SSRP1Q08945 AC006539.3-201ENST00000454258 129 ntBASIC3.82□□□□□ -1.8
SSRP1Q08945 AC008155.2-201ENST00000464337 397 ntBASIC3.82□□□□□ -1.8
SSRP1Q08945 RPS26P21-201ENST00000475397 348 ntBASIC3.82□□□□□ -1.8
SSRP1Q08945 AC015911.1-201ENST00000495111 156 ntBASIC3.82□□□□□ -1.8
SSRP1Q08945 Y_RNA.720-201ENST00000517166 92 ntBASIC3.82□□□□□ -1.8
SSRP1Q08945 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.82□□□□□ -1.8
SSRP1Q08945 AC025281.1-201ENST00000567026 265 ntBASIC3.82□□□□□ -1.8
SSRP1Q08945 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.82□□□□□ -1.8
SSRP1Q08945 7SK.7-201ENST00000603504 247 ntBASIC3.82□□□□□ -1.8
SSRP1Q08945 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.82□□□□□ -1.8
SSRP1Q08945 GABRG2-229ENST00000641017 3628 ntBASIC3.82□□□□□ -1.8
SSRP1Q08945 AC010889.1-201ENST00000566193 2666 ntBASIC3.82□□□□□ -1.8
SSRP1Q08945 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSRP1Q08945 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SSRP1Q08945 RBBP8P1-201ENST00000449447 1844 ntBASIC3.81□□□□□ -1.8
SSRP1Q08945 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SSRP1Q08945 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SSRP1Q08945 AL021368.2-201ENST00000606125 5352 ntBASIC3.81□□□□□ -1.8
SSRP1Q08945 MIR183-201ENST00000384958 110 ntBASIC3.81□□□□□ -1.8
SSRP1Q08945 PTMAP5-201ENST00000393073 333 ntBASIC3.81□□□□□ -1.8
SSRP1Q08945 MTCYBP2-201ENST00000407745 171 ntBASIC3.81□□□□□ -1.8
SSRP1Q08945 RNU6-985P-201ENST00000410182 104 ntBASIC3.81□□□□□ -1.8
SSRP1Q08945 RNA5SP390-201ENST00000410191 113 ntBASIC3.81□□□□□ -1.8
SSRP1Q08945 RPL23AP95-201ENST00000426806 265 ntBASIC3.81□□□□□ -1.8
SSRP1Q08945 MTND5P22-201ENST00000458380 195 ntBASIC3.81□□□□□ -1.8
SSRP1Q08945 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.81□□□□□ -1.8
SSRP1Q08945 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.81□□□□□ -1.8
SSRP1Q08945 IGKV2-23-201ENST00000518729 323 ntBASIC3.81□□□□□ -1.8
SSRP1Q08945 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.81□□□□□ -1.8
SSRP1Q08945 AC090897.2-201ENST00000581715 130 ntBASIC3.81□□□□□ -1.8
SSRP1Q08945 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.81□□□□□ -1.8
SSRP1Q08945 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.81□□□□□ -1.8
SSRP1Q08945 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.81□□□□□ -1.8
SSRP1Q08945 MIR1244-1-201ENST00000612829 85 ntBASIC3.81□□□□□ -1.8
SSRP1Q08945 AL138825.1-201ENST00000618587 192 ntBASIC3.81□□□□□ -1.8
SSRP1Q08945 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.81□□□□□ -1.8
SSRP1Q08945 MIR1244-3-201ENST00000635744 85 ntBASIC3.81□□□□□ -1.8
SSRP1Q08945 MIR1244-2-201ENST00000636449 85 ntBASIC3.81□□□□□ -1.8
SSRP1Q08945 MIR1244-4-202ENST00000636813 85 ntBASIC3.81□□□□□ -1.8
SSRP1Q08945 U6.105-201ENST00000637379 88 ntBASIC3.81□□□□□ -1.8
SSRP1Q08945 AC233981.2-201ENST00000611524 1614 ntBASIC3.81□□□□□ -1.8
SSRP1Q08945 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SSRP1Q08945 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SSRP1Q08945 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSRP1Q08945 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.8□□□□□ -1.8
SSRP1Q08945 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.8□□□□□ -1.8
SSRP1Q08945 RNU4-42P-201ENST00000364738 142 ntBASIC3.8□□□□□ -1.8
SSRP1Q08945 SNORA14A-201ENST00000364773 135 ntBASIC3.8□□□□□ -1.8
SSRP1Q08945 RNU6-968P-201ENST00000384076 107 ntBASIC3.8□□□□□ -1.8
SSRP1Q08945 RNU6-622P-201ENST00000384272 103 ntBASIC3.8□□□□□ -1.8
SSRP1Q08945 RNA5SP494-201ENST00000410653 129 ntBASIC3.8□□□□□ -1.8
SSRP1Q08945 AL365496.1-201ENST00000426885 215 ntBASIC3.8□□□□□ -1.8
SSRP1Q08945 RPL23AP83-201ENST00000434984 473 ntBASIC3.8□□□□□ -1.8
SSRP1Q08945 PRSS3P4-201ENST00000453323 162 ntBASIC3.8□□□□□ -1.8
SSRP1Q08945 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.8□□□□□ -1.8
SSRP1Q08945 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.8□□□□□ -1.8
SSRP1Q08945 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.8□□□□□ -1.8
SSRP1Q08945 AC144568.1-201ENST00000520139 137 ntBASIC3.8□□□□□ -1.8
SSRP1Q08945 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SSRP1Q08945 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.8□□□□□ -1.8
SSRP1Q08945 AL162373.1-201ENST00000620433 407 ntBASIC3.8□□□□□ -1.8
SSRP1Q08945 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.8□□□□□ -1.8
SSRP1Q08945 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.79□□□□□ -1.8
SSRP1Q08945 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SSRP1Q08945 RNU6-1141P-201ENST00000364520 107 ntBASIC3.79□□□□□ -1.8
SSRP1Q08945 RNU6-1222P-201ENST00000384615 107 ntBASIC3.79□□□□□ -1.8
SSRP1Q08945 AL353752.1-201ENST00000454946 260 ntBASIC3.79□□□□□ -1.8
SSRP1Q08945 AL441985.1-201ENST00000457727 251 ntBASIC3.79□□□□□ -1.8
SSRP1Q08945 AC091874.1-201ENST00000511402 339 ntBASIC3.79□□□□□ -1.8
SSRP1Q08945 RNU6-764P-201ENST00000516396 105 ntBASIC3.79□□□□□ -1.8
SSRP1Q08945 RNU5B-3P-201ENST00000516601 115 ntBASIC3.79□□□□□ -1.8
SSRP1Q08945 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.79□□□□□ -1.8
SSRP1Q08945 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.79□□□□□ -1.8
SSRP1Q08945 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.79□□□□□ -1.8
SSRP1Q08945 AC104581.2-201ENST00000572227 430 ntBASIC3.79□□□□□ -1.8
SSRP1Q08945 SNORD58B-201ENST00000607313 66 ntBASIC3.79□□□□□ -1.8
SSRP1Q08945 AC019176.2-201ENST00000611579 315 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms